EST details — SGN-C71216

Search information 
Request: 71216Match: SGN-C71216
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C71216Clone name: cLER-17-D3
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178855 is on microarray TOM1: SGN-S1-1-4.4.2.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178855 [TUS-30-D21] Trace: SGN-T184751 EST: SGN-E372311 Direction: 3' Facility: INRA
Clone: SGN-C178855 [TUS-30-D21] Trace: SGN-T184752 EST: SGN-E372312 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E283016Length: 502 bp (791 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E283016 [] (trimmed) CTCTATTACCCATGGATTTATTTCTAATTGTTGTTACATTAGCTACCTCCTTTATTCTACTTTTCATTCTTCATAAACAATTTTACTCAGTTAAA
AAGCAGAGTAGTAATAGTACGAAAGGTACCTGAAGCTGGCGGAGCATGGACTATTATCGGCCATCTCCACCTTGTAGGTGGATCTGAATCTGATC
ACTTGCCTCACAAAATGTTGGGCCGCTTGGCAGATAAGTACGGGCCTATTTTCGGAATGAAGCTTGGAGTTCATCAAGTTGTAGTTGTGAGTGAT
CACAAATTAGCAAAGGAGTGCTTGACAACTAACGATTTAGCCCTAGCAGGTCGGTCTAAATCAATGGCTTCAGAGATTATAGGCTACAAACATGC
TATGTTTGGACTTTGGTCTTACGGTGCGTACTGGAGAGAAACAAGGAAAATTGCCACAATTGAACTTTTCTCCGGTCGACGAATCGAGATGCTCA
AACACATCAGAGAATTTGAGGTAAAAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E283016] SGN-U564761 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T95867 [Download] [View] Facility Assigned ID: TPRCO14TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0237 Quality Trim Threshold: 14.5