EST details — SGN-C71430
Search information |
Request: 71430 | Match: SGN-C71430 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C71430 | Clone name: cLER-17-N20 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185399 is on microarray TOM1: SGN-S1-1-4.1.9.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185399 [TUS-47-E13] | Trace: SGN-T192306 | EST: SGN-E390980 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E283241 | Length: 418 bp (842 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283241 [] (trimmed)
AAAAATAACAACTTGATTCAAAGAACTCTTATGTACAAACAGTTACCTATATTTGGTCAGCACTTACATATAGTTGTTACACTACTTATAACATC
AATGCTTAACCAAACACTTCAAATTATATATAAGCAATATATAAAAACTATATAATTCGTTATAACGATGTTTCACTCCTTTGTCTACGCATATG
TGCACCCCATGACATATTGTTACCAGAGTCCTTGTGTGAGTTTCTTCTTTTCAACTCCGATAGCTGAGAATGCCATCGATTCTTCCATTCACCGG
GGTTCTCCATTGACTCATCATTTTGGCACTTTCTACGAGGAGAAAATGCAAAATGAAGTCCTTTAGACATATGTTTGTCATACATATCTCTTGAT
TTAGGAGCCGATAATGTCTCATAAGCCTCTTGAACCCG
AATGCTTAACCAAACACTTCAAATTATATATAAGCAATATATAAAAACTATATAATTCGTTATAACGATGTTTCACTCCTTTGTCTACGCATATG
TGCACCCCATGACATATTGTTACCAGAGTCCTTGTGTGAGTTTCTTCTTTTCAACTCCGATAGCTGAGAATGCCATCGATTCTTCCATTCACCGG
GGTTCTCCATTGACTCATCATTTTGGCACTTTCTACGAGGAGAAAATGCAAAATGAAGTCCTTTAGACATATGTTTGTCATACATATCTCTTGAT
TTAGGAGCCGATAATGTCTCATAAGCCTCTTGAACCCG
Unigenes |
Current Unigene builds | |||||
[SGN-E283241] | SGN-U581004 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T96092 [Download] [View] | Facility Assigned ID: TPRCP82TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.941 | Expected Error Rate: 0.0158 | Quality Trim Threshold: 14.5 |