EST details — SGN-C71992
Search information |
Request: 71992 | Match: SGN-C71992 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C71992 | Clone name: cLER-19-M9 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185409 is on microarray TOM1: SGN-S1-1-2.1.9.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185409 [TUS-47-E23] | Trace: SGN-T197623 | EST: SGN-E396297 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E284988 | Length: 524 bp (876 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E284988 [] (trimmed)
CGCATCGAAGAATATTTTATTTTAACTTACTAACAAAAAGGCTGGAAGACAAATTTTATCTATAATATTTCAAAAATAAAAATAAAAATACACCA
CATGAAGAATTACAAGTCTAGTGCACCATAATTGCATACAAATTCAAAGATCACAACTAGTTTTTACAAACAAAACTAGCATTACAATACATCTT
TATTCAAAATTACATAATATTTTTTTTCTTCTCAAACTTCTTCTTTTACACATAAAAATCAAAATTATTTATTTAGCATGGCTTGGTGCAAAAGC
AACGGCGACGGAATCCACGGCAATTACCACCGGAAAATCTTTCGGTCTCGCAAACCGAGGCACAATTCTTATCGCTCACACATGGTCCCTTGAAA
CGATGGCTCAACGACTCACAATGTCTTGCCTCTACGATTCTCGTTGGTCCCATTTCAGTAGCCATAACAAGCATGGCTAGAAGAAACAAAGTAGC
AAAGAAACGAATGGATTGTGCCATTTTCACAAATTTTTTTGAGCCATTT
CATGAAGAATTACAAGTCTAGTGCACCATAATTGCATACAAATTCAAAGATCACAACTAGTTTTTACAAACAAAACTAGCATTACAATACATCTT
TATTCAAAATTACATAATATTTTTTTTCTTCTCAAACTTCTTCTTTTACACATAAAAATCAAAATTATTTATTTAGCATGGCTTGGTGCAAAAGC
AACGGCGACGGAATCCACGGCAATTACCACCGGAAAATCTTTCGGTCTCGCAAACCGAGGCACAATTCTTATCGCTCACACATGGTCCCTTGAAA
CGATGGCTCAACGACTCACAATGTCTTGCCTCTACGATTCTCGTTGGTCCCATTTCAGTAGCCATAACAAGCATGGCTAGAAGAAACAAAGTAGC
AAAGAAACGAATGGATTGTGCCATTTTCACAAATTTTTTTGAGCCATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E284988] | SGN-U581633 | Tomato 200607 | Build 2 | 51 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T96560 [Download] [View] | Facility Assigned ID: TPRCU77TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.939 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |