EST details — SGN-C72052
| Search information |
| Request: 72052 | Match: SGN-C72052 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72052 | Clone name: cLER-1-A16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178424 is on microarray TOM1: SGN-S1-1-3.2.4.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178424 [TUS-29-B22] | Trace: SGN-T184176 | EST: SGN-E371409 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178424 [TUS-29-B22] | Trace: SGN-T184177 | EST: SGN-E371410 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280347 | Length: 516 bp (824 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280347 [] (trimmed)
TTTCTCTGCCACCAAAGGTGATTTCACTGACGGCCGCCACCAATCTGAGAAAATGTCGCAAGAATCACTAGTCCTCCGCGGTACCATGAAAGCCC
ACACTGACTGGGTCACTGCTATTGCAACCCCAATTGACAACTCCGACATGATTGTCACCTCCTCCAGGGATAAGTCCATCATCGTCTGGTCTTTG
ACTAAAGACGGCTCACAATACGGTGTCCCTCGTCGCCGTCTTACCGGACATGGCCATTTCGTTGAAGATGTCGTGTTGTCGTCTGACGGCATGTT
TGCACTCTCCGGTTCATGGGACGGTGAGCTCCGTTTATGGGATCTTCAAGCTGGAACAACTGCTCGTCGTTTCGTTGGACACACTAAAGATGTTC
TCTCTGTTGCATTCTCTGTTGACAACCGTCAGATTGTCTCTGCTTCCCGTGACAAGACCATCAAGCTATGGAACACACTCGGTGAGTGCAAGTAC
ACAATTCAGGAACAGGAATTACACTCTGATTGGGGTTCTTG
ACACTGACTGGGTCACTGCTATTGCAACCCCAATTGACAACTCCGACATGATTGTCACCTCCTCCAGGGATAAGTCCATCATCGTCTGGTCTTTG
ACTAAAGACGGCTCACAATACGGTGTCCCTCGTCGCCGTCTTACCGGACATGGCCATTTCGTTGAAGATGTCGTGTTGTCGTCTGACGGCATGTT
TGCACTCTCCGGTTCATGGGACGGTGAGCTCCGTTTATGGGATCTTCAAGCTGGAACAACTGCTCGTCGTTTCGTTGGACACACTAAAGATGTTC
TCTCTGTTGCATTCTCTGTTGACAACCGTCAGATTGTCTCTGCTTCCCGTGACAAGACCATCAAGCTATGGAACACACTCGGTGAGTGCAAGTAC
ACAATTCAGGAACAGGAATTACACTCTGATTGGGGTTCTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280347] | SGN-U582594 | Tomato 200607 | Build 2 | 106 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91901 [Download] [View] | Facility Assigned ID: TPRAB08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
