EST details — SGN-C72297
| Search information |
| Request: 72297 | Match: SGN-C72297 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C72297 | Clone name: cLER-1-M13 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178631 is on microarray TOM1: SGN-S1-1-4.3.4.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72297 [cLER-1-M13] | Trace: SGN-T92070 | EST: SGN-E280516 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C178631 [TUS-29-K13] | Trace: SGN-T183853 | EST: SGN-E370512 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280515 | Length: 512 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280515 [] (trimmed)
CATTATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCATTTGCTGG
ACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAATTTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCA
GCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACTGGCGAATTCCCTGGTGACTATGGA
TGGGATACCGCTGGACTTTCAGCTGACCCTGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCT
TGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAAATTGGTGAAGCTGTGTGGTTCAAGGCCGGATCCCAGATTTTCAGCGAGGGTG
GACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGC
ACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAATTTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCA
GCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACTGGCGAATTCCCTGGTGACTATGGA
TGGGATACCGCTGGACTTTCAGCTGACCCTGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCT
TGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAAATTGGTGAAGCTGTGTGGTTCAAGGCCGGATCCCAGATTTTCAGCGAGGGTG
GACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280515] | SGN-U580483 | Tomato 200607 | Build 2 | 81 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92069 [Download] [View] | Facility Assigned ID: TPRAA79TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0117 | Quality Trim Threshold: 14.5 |
Working
