EST details — SGN-C73362
Search information |
Request: 73362 | Match: SGN-C73362 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C73362 | Clone name: cLER-4-H1 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185317 is on microarray TOM1: SGN-S1-1-6.2.10.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185317 [TUS-47-B3] | Trace: SGN-T192217 | EST: SGN-E390891 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E278004 | Length: 408 bp (893 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E278004 [] (trimmed)
ATCTTATAAACCTCATTCCTCTCAAACAACATCCCATGGCTCCTGCTCTTGAACAAGCAATAACCAGCGATGCATCATCGGACGTTACCATCACT
GGAAAGATATACACACGAGTTCGTCTCGCTACGAAATCTGATCTTTCTCATATATACCGATTGTTTTACCAAATCCATGAATACCATAACTATAC
TCATTTATACAAAGCTACTGAGTCCTCCTTAGCCAACTTGCTCTTTAAGGAAAACCCTCTTCCACTTTTCTACCGGCCATCTGTTCTTCTACTTG
AAGTCTCTCCAACCCCTTTTGACGAACCTAAAAATACTACAGACGAAGGGTTCAAGCCTGTCCTTACAACGTTTGACCTTAAATTCCCAGTCGTA
GAAGGAGAAGTTGAGGAATTCCGATCCA
GGAAAGATATACACACGAGTTCGTCTCGCTACGAAATCTGATCTTTCTCATATATACCGATTGTTTTACCAAATCCATGAATACCATAACTATAC
TCATTTATACAAAGCTACTGAGTCCTCCTTAGCCAACTTGCTCTTTAAGGAAAACCCTCTTCCACTTTTCTACCGGCCATCTGTTCTTCTACTTG
AAGTCTCTCCAACCCCTTTTGACGAACCTAAAAATACTACAGACGAAGGGTTCAAGCCTGTCCTTACAACGTTTGACCTTAAATTCCCAGTCGTA
GAAGGAGAAGTTGAGGAATTCCGATCCA
Unigenes |
Current Unigene builds | |||||
[SGN-E278004] | SGN-U578909 | Tomato 200607 | Build 2 | 52 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T92837 [Download] [View] | Facility Assigned ID: TPRAO37TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.960 | Expected Error Rate: 0.0080 | Quality Trim Threshold: 14.5 |