EST details — SGN-C74483
Search information |
Request: 74483 | Match: SGN-C74483 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C74483 | Clone name: cLER-9-L4 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184371 is on microarray TOM1: SGN-S1-1-8.2.16.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C184371 [TUS-44-J17] | Trace: SGN-T198302 | EST: SGN-E396976 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E278268 | Length: 544 bp (973 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E278268 [] (trimmed)
CTTCTCTGGTAAGGCCGTGTTTGGTGGTGGACCTCTCCGATAAGGCCGTGTTTGGTGGTGGAAAATTCCGTTAGGGTTTTTGTGGAGATGGCTCA
ATCGATGAGCAGAGGAGGGAGGTCTGTAGTTGGGGACTATGTTGTTGGGAAGCAAATCGGTGCCGGCTCTTTCTCGACGGTTTGGCATGCTCGGC
ACCGAGCTCATGGAACAGAAGTGGCTATAAAAGAGATCGTTACGGCTCGGCTTAACAATAAGCTTCAGGAGAGTCTAAAGTCGGAAATTGTAATT
TTGCAGAAGATCAATCATCCTAATATTATTCGCCTGCACGACATGATCGAGGAGGTGGGCAAAATATATATTGTTCTGGAGTACTGCAGAGGAGG
AGATCTTTCTATGTACATTCAACAAAGCCAAGGGAGAATTCCAGAAGCAACTGCGAAACATTTTATGCAGCAACTTGCATCTGGTCTAAAAATCC
TTCGTGACAACAATCTAATCCATAGGGATCTAAAGCCTCAGAATCTCCTCTTATCCTCAAGCAATGACC
ATCGATGAGCAGAGGAGGGAGGTCTGTAGTTGGGGACTATGTTGTTGGGAAGCAAATCGGTGCCGGCTCTTTCTCGACGGTTTGGCATGCTCGGC
ACCGAGCTCATGGAACAGAAGTGGCTATAAAAGAGATCGTTACGGCTCGGCTTAACAATAAGCTTCAGGAGAGTCTAAAGTCGGAAATTGTAATT
TTGCAGAAGATCAATCATCCTAATATTATTCGCCTGCACGACATGATCGAGGAGGTGGGCAAAATATATATTGTTCTGGAGTACTGCAGAGGAGG
AGATCTTTCTATGTACATTCAACAAAGCCAAGGGAGAATTCCAGAAGCAACTGCGAAACATTTTATGCAGCAACTTGCATCTGGTCTAAAAATCC
TTCGTGACAACAATCTAATCCATAGGGATCTAAAGCCTCAGAATCTCCTCTTATCCTCAAGCAATGACC
Unigenes |
Current Unigene builds | |||||
[SGN-E278268] | SGN-U567810 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T94002 [Download] [View] | Facility Assigned ID: TPRBJ62THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.988 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |