EST details — SGN-C75192
Search information |
Request: 75192 | Match: SGN-C75192 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C75192 | Clone name: cLES-13-D14 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185523 is on microarray TOM1: SGN-S1-1-8.2.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185523 [TUS-47-J17] | Trace: SGN-T192350 | EST: SGN-E391024 | Direction: 5' | Facility: INRA |
Clone: SGN-C185523 [TUS-47-J17] | Trace: SGN-T192623 | EST: SGN-E391297 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E286144 | Length: 453 bp (775 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286144 [] (trimmed)
AAGGTCAATTGTATAGAGAGTACCTTTTTTTGTGTAAAATTTAAAGTGCAATAATTTTGAAGAATTCATCAATGGCAAGTTTAAGCAGATTCTTG
AAGAAAAGATCATTAGATTATAATAATGTTGATTTGATGAGAGCAGCTAGCAACAGATTGTTCTCTACACAACTTCCTCATACTAACATCAAGTC
TGAAGTTTCTCAATTAATTGGGAAAACACCAATGGTTTATCTTAAAAAAGTGACAGAAGGATGTGGAGCCTATATAGCTGTGAAACAGGAGATGT
TTCAGCCTACTTCTAGCATCAAAGACAGACCAGCATTGGCAATGATCAATGATGCAGAAAAAAAAGGCTTAATATCACCTGAAAAGACGACGTTG
ATTGAGCCAACATCAGGAAATATGGGGATCAGTATGGGATTTATGGCACCAATGAAAGGCTACAAAATGGTTT
AAGAAAAGATCATTAGATTATAATAATGTTGATTTGATGAGAGCAGCTAGCAACAGATTGTTCTCTACACAACTTCCTCATACTAACATCAAGTC
TGAAGTTTCTCAATTAATTGGGAAAACACCAATGGTTTATCTTAAAAAAGTGACAGAAGGATGTGGAGCCTATATAGCTGTGAAACAGGAGATGT
TTCAGCCTACTTCTAGCATCAAAGACAGACCAGCATTGGCAATGATCAATGATGCAGAAAAAAAAGGCTTAATATCACCTGAAAAGACGACGTTG
ATTGAGCCAACATCAGGAAATATGGGGATCAGTATGGGATTTATGGCACCAATGAAAGGCTACAAAATGGTTT
Unigenes |
Current Unigene builds | |||||
[SGN-E286144] | SGN-U570112 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T100457 [Download] [View] | Facility Assigned ID: TPSBZ19TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.929 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |