EST details — SGN-C75653
| Search information |
| Request: 75653 | Match: SGN-C75653 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C75653 | Clone name: cLES-14-P10 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185235 is on microarray TOM1: SGN-S1-1-8.2.11.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185235 [TUS-46-N17] | Trace: SGN-T1881 | EST: SGN-E378738 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185235 [TUS-46-N17] | Trace: SGN-T199061 | EST: SGN-E397735 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185235 [TUS-46-N17] | Trace: SGN-T199114 | EST: SGN-E397788 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286782 | Length: 619 bp (788 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286782 [] (trimmed)
GTTCACCGTGATGTATCATTGAATAACATTTTGCTTGAATCAGAATTCGGGCCACGACTCTCTGACTTTGGCACAGCAAAGTTGTTAGCTTCCGA
CTCATCAAATTGGACCACAGTTGCTGGTTCTTATGGCTATATGGCACCAGAGCTTGCACTTACCATGCGTGTTACAGAAAAGTGTGATGTCTATA
GTTTTGGAGTCGTAGCGATGGAGACTATGATGGGAAGGCATCCAGGGGAGCTTTTAACTTCATTATCAGCATCAACAACATTGTCTCCGGAAATA
CTTTTGAAGGATGTTCTTGACCAAAGACTTCCTCCTCCCACCGGCCACTTGGCAGAGGCAGTGGTTTTTGTGATCACGATTGCCTTGGCATGTAC
ACGTACCACGCCTGAATCGCGACCAACCATGCGTTCTGTAGCACAAGAATTGTCTGTTCAGACTTTGCCTTACCTTCCACAGCCACTGGGGACAA
TAGAAATGAGCAAACTAACAAGTTTTCAGAAATAATGTACAGGTTGTAGAGTTTTAGTGTTGTAATGGATCTATTCAAATAAGTATGTTTTAGAT
GCACTTTTCCCTAGAAAGAAAGAAATAATATCATCTTGTTAATCATGAA
CTCATCAAATTGGACCACAGTTGCTGGTTCTTATGGCTATATGGCACCAGAGCTTGCACTTACCATGCGTGTTACAGAAAAGTGTGATGTCTATA
GTTTTGGAGTCGTAGCGATGGAGACTATGATGGGAAGGCATCCAGGGGAGCTTTTAACTTCATTATCAGCATCAACAACATTGTCTCCGGAAATA
CTTTTGAAGGATGTTCTTGACCAAAGACTTCCTCCTCCCACCGGCCACTTGGCAGAGGCAGTGGTTTTTGTGATCACGATTGCCTTGGCATGTAC
ACGTACCACGCCTGAATCGCGACCAACCATGCGTTCTGTAGCACAAGAATTGTCTGTTCAGACTTTGCCTTACCTTCCACAGCCACTGGGGACAA
TAGAAATGAGCAAACTAACAAGTTTTCAGAAATAATGTACAGGTTGTAGAGTTTTAGTGTTGTAATGGATCTATTCAAATAAGTATGTTTTAGAT
GCACTTTTCCCTAGAAAGAAAGAAATAATATCATCTTGTTAATCATGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286782] | SGN-U564935 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100603 [Download] [View] | Facility Assigned ID: TPSCD89TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0070 | Quality Trim Threshold: 12.5 |
Working
