EST details — SGN-C77240
| Search information |
| Request: 77240 | Match: SGN-C77240 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77240 | Clone name: cLES-20-F5 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179284 is on microarray TOM1: SGN-S1-1-7.2.2.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179284 [TUS-31-F18] | Trace: SGN-T185642 | EST: SGN-E373504 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179284 [TUS-31-F18] | Trace: SGN-T185643 | EST: SGN-E373505 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290571 | Length: 282 bp (1104 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290571 [] (trimmed)
ATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGCCGTCACTCTGGATATGGTAAGCG
CAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAA
AGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCAC
CAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTTGCTTCGCAAGTATAGGGAATCAA
AGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTGATGGAAAATATCCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290571] | SGN-U578709 | Tomato 200607 | Build 2 | 92 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102250 [Download] [View] | Facility Assigned ID: TPSDA27TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.952 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
