EST details — SGN-C77253
Search information |
Request: 77253 | Match: SGN-C77253 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C77253 | Clone name: cLES-20-G18 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179288 is on microarray TOM1: SGN-S1-1-3.2.2.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C179288 [TUS-31-F22] | Trace: SGN-T185561 | EST: SGN-E373423 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E290536 | Length: 453 bp (1205 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E290536 [] (trimmed)
CGGGCACTCCCCCGTGAAGTTGATCCTGTTGTGTACAACATGCTTCATGAAGATCCTGGCAACATCAGTTACTCTGCCGTGGGTGGACTGTCAGA
TCAGATCAGGGAGCTGAGAGAATCCATTGAGTTACCTCTAATGAACCCTGAGCTTTTCCTCCGGGTTGGGATTAAGCCTCCAAAGGGTGTTCTTC
TCTACGGGCCTCCTGGAACAGGCAAGACATTGTTAGCCAGGGCAATCGCTAGCAACATAGATGCCAATTTCTTAAAGGTTGTATCAAGTGCCATT
ATTGATAAGTACATTGGTGAGAGTGCAAGATTAATTCGGGAAATGTTTAACTATGCGCGTGATCACCAACCTTGCATCATATTCATGGATGAGAT
AGATGCAATTGGTGGACGTCGTTTTAGTGAGGGAACCAGTGCAGACCGTGAAATCCAAAGAACGCTCATGGAG
TCAGATCAGGGAGCTGAGAGAATCCATTGAGTTACCTCTAATGAACCCTGAGCTTTTCCTCCGGGTTGGGATTAAGCCTCCAAAGGGTGTTCTTC
TCTACGGGCCTCCTGGAACAGGCAAGACATTGTTAGCCAGGGCAATCGCTAGCAACATAGATGCCAATTTCTTAAAGGTTGTATCAAGTGCCATT
ATTGATAAGTACATTGGTGAGAGTGCAAGATTAATTCGGGAAATGTTTAACTATGCGCGTGATCACCAACCTTGCATCATATTCATGGATGAGAT
AGATGCAATTGGTGGACGTCGTTTTAGTGAGGGAACCAGTGCAGACCGTGAAATCCAAAGAACGCTCATGGAG
Unigenes |
Current Unigene builds | |||||
[SGN-E290536] | SGN-U566414 | Tomato 200607 | Build 2 | 47 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T102215 [Download] [View] | Facility Assigned ID: TPSCZ45THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.980 | Expected Error Rate: 0.0191 | Quality Trim Threshold: 14.5 |