EST details — SGN-C77266
Search information |
Request: 77266 | Match: SGN-C77266 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C77266 | Clone name: cLES-20-G9 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179291 is on microarray TOM1: SGN-S1-1-8.3.2.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C179291 [TUS-31-G1] | Trace: SGN-T185116 | EST: SGN-E372659 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E290324 | Length: 562 bp (832 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E290324 [] (trimmed)
TGGTGGTGAGAGGCGGAGAAAATGCAGATCTTCGTGAAAACTTTGACGGGTAAAACCATAACCCTCGAGGTTGAATCCAGTGACACTATTGACAA
TGTCAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAGCTAGAAGATGGCCGCACTCTTG
CTGACTATAACATTCAGAAAGAGTCGACTTTGCATTTGGTGCTGAGGCTTCGTGGAGGAATTATTGAGCCTTCTTTGATGGCTTTGGCTAGGAAG
TACAATCAGGAAAAGATGATTTGCCGCAAGTGCTACGCTCGCCTACATCCCCGTGCTGTCAACTGCCGCAAGAAGAAGTGTGGGCACAGCAACCA
GTTGAGGCCTAAGAAGAAGATCAAGTAGATGGTGATTTTGAATTTCTGTCAGCATGTAGTTGCTCATGTTGAGAAACGGATTAGATTTGCTTGTT
CAATTTTATCCTAAAAACTTTGATGAATTTGTGTTTTATTTGTATCAAAGATTTTGATCATCTTTCTGTGTTATATTTTCCCAAGTG
TGTCAAGGCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAGCTAGAAGATGGCCGCACTCTTG
CTGACTATAACATTCAGAAAGAGTCGACTTTGCATTTGGTGCTGAGGCTTCGTGGAGGAATTATTGAGCCTTCTTTGATGGCTTTGGCTAGGAAG
TACAATCAGGAAAAGATGATTTGCCGCAAGTGCTACGCTCGCCTACATCCCCGTGCTGTCAACTGCCGCAAGAAGAAGTGTGGGCACAGCAACCA
GTTGAGGCCTAAGAAGAAGATCAAGTAGATGGTGATTTTGAATTTCTGTCAGCATGTAGTTGCTCATGTTGAGAAACGGATTAGATTTGCTTGTT
CAATTTTATCCTAAAAACTTTGATGAATTTGTGTTTTATTTGTATCAAAGATTTTGATCATCTTTCTGTGTTATATTTTCCCAAGTG
Unigenes |
Current Unigene builds | |||||
[SGN-E290324] | SGN-U580396 | Tomato 200607 | Build 2 | 48 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T102003 [Download] [View] | Facility Assigned ID: TPSCY41TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 12.5 |