EST details — SGN-C77440
| Search information |
| Request: 77440 | Match: SGN-C77440 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77440 | Clone name: cLES-20-P12 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179359 is on microarray TOM1: SGN-S1-1-4.1.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179359 [TUS-31-I21] | Trace: SGN-T185135 | EST: SGN-E372678 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179359 [TUS-31-I21] | Trace: SGN-T185136 | EST: SGN-E372679 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290638 | Length: 519 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290638 [] (trimmed)
GAGATTATACCCAGCACTCACCCTTATGCGAAGCACCTCAAAGGACACTAAATTGGGAGAAATGACAATTCCTGCAGGAGTACAAATTTTTGTGC
CTATATACATAGCACATCGCGACCCCCAAGTATGGGGAGACGATGCACTGATTTTCAATCCAAATAGGTTCTCAGAAGGGGTATCCAAAGCTGCA
AAAGAGCCATTGTATTTCCCCTTCGGTTGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGAATGGCAGAAGCAAAGCTCGTTTTATCTCAAAT
TCTGCAGAGGTTTTGGTTCAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAGGCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCC
TCAACAAGCTCTGATGGTTTACTTAATTATCACAACTACTAGTACTAGTTCAATAAATGAGGTTCATATGTATTCTGCATTTCAATACCATGTTA
TTTTTGTATGTGTGACAAACTCTCATTAGCACTATTAAATAATT
CTATATACATAGCACATCGCGACCCCCAAGTATGGGGAGACGATGCACTGATTTTCAATCCAAATAGGTTCTCAGAAGGGGTATCCAAAGCTGCA
AAAGAGCCATTGTATTTCCCCTTCGGTTGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGAATGGCAGAAGCAAAGCTCGTTTTATCTCAAAT
TCTGCAGAGGTTTTGGTTCAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAGGCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCC
TCAACAAGCTCTGATGGTTTACTTAATTATCACAACTACTAGTACTAGTTCAATAAATGAGGTTCATATGTATTCTGCATTTCAATACCATGTTA
TTTTTGTATGTGTGACAAACTCTCATTAGCACTATTAAATAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290638] | SGN-U578058 | Tomato 200607 | Build 2 | 108 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102317 [Download] [View] | Facility Assigned ID: TPSDB90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 12.5 |
Working
