EST details — SGN-C77440
Search information |
Request: 77440 | Match: SGN-C77440 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C77440 | Clone name: cLES-20-P12 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179359 is on microarray TOM1: SGN-S1-1-4.1.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C179359 [TUS-31-I21] | Trace: SGN-T185135 | EST: SGN-E372678 | Direction: 3' | Facility: INRA |
Clone: SGN-C179359 [TUS-31-I21] | Trace: SGN-T185136 | EST: SGN-E372679 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E290638 | Length: 519 bp (884 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290638 [] (trimmed)
GAGATTATACCCAGCACTCACCCTTATGCGAAGCACCTCAAAGGACACTAAATTGGGAGAAATGACAATTCCTGCAGGAGTACAAATTTTTGTGC
CTATATACATAGCACATCGCGACCCCCAAGTATGGGGAGACGATGCACTGATTTTCAATCCAAATAGGTTCTCAGAAGGGGTATCCAAAGCTGCA
AAAGAGCCATTGTATTTCCCCTTCGGTTGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGAATGGCAGAAGCAAAGCTCGTTTTATCTCAAAT
TCTGCAGAGGTTTTGGTTCAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAGGCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCC
TCAACAAGCTCTGATGGTTTACTTAATTATCACAACTACTAGTACTAGTTCAATAAATGAGGTTCATATGTATTCTGCATTTCAATACCATGTTA
TTTTTGTATGTGTGACAAACTCTCATTAGCACTATTAAATAATT
CTATATACATAGCACATCGCGACCCCCAAGTATGGGGAGACGATGCACTGATTTTCAATCCAAATAGGTTCTCAGAAGGGGTATCCAAAGCTGCA
AAAGAGCCATTGTATTTCCCCTTCGGTTGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGAATGGCAGAAGCAAAGCTCGTTTTATCTCAAAT
TCTGCAGAGGTTTTGGTTCAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAGGCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCC
TCAACAAGCTCTGATGGTTTACTTAATTATCACAACTACTAGTACTAGTTCAATAAATGAGGTTCATATGTATTCTGCATTTCAATACCATGTTA
TTTTTGTATGTGTGACAAACTCTCATTAGCACTATTAAATAATT
Unigenes |
Current Unigene builds | |||||
[SGN-E290638] | SGN-U578058 | Tomato 200607 | Build 2 | 108 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T102317 [Download] [View] | Facility Assigned ID: TPSDB90TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 12.5 |