EST details — SGN-C77707
| Search information |
| Request: 77707 | Match: SGN-C77707 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C77707 | Clone name: cLES-3-A14 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185433 is on microarray TOM1: SGN-S1-1-2.2.9.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185433 [TUS-47-F23] | Trace: SGN-T192334 | EST: SGN-E391008 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185433 [TUS-47-F23] | Trace: SGN-T192611 | EST: SGN-E391285 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E284595 | Length: 523 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E284595 [] (trimmed)
GTGTATGGCCGGATCATATACTCCTCCTGCCCACACAGAGAAGAAGAAAAATGGCATGTCTTACAGATCCGGCAGAAGTTCCTTCAGTCGCTGAA
GACTGTGAACAACTCCGATCTGCCTTCAAAGGATGGGGAACGAATGAGAAGTTGATTATATCAATTTTGGCTCATAGAAATGCGGCTCAACGCAA
ATTGATTCGACAGACTTATGCTGAGACTTTTGGGGAAGATCTGCTTAAAGAGTTGGACAGAGAACTTACTCATGATTTTGAGAAATTGGTGGTAG
TATGGACACTGGATCCTGCAGAACGTGATGCCTATTTGGCTAAGGAAGCTATTAAGAGATGGACAAAAAGCAACTTTGTTCTTGTGGAGATAGCT
TGTACCAGATCTCCTAAAGAACTGGTTTTGGCAAGAGAAGCTTATCATGCTCGTAACAAGAAATCTCTCGAAGAGGACGTTGCTTATCACACTAC
TGGGGATCACCGCAAGCTTTTGGTACCTCTTGTGAGCTCCTACCGATA
GACTGTGAACAACTCCGATCTGCCTTCAAAGGATGGGGAACGAATGAGAAGTTGATTATATCAATTTTGGCTCATAGAAATGCGGCTCAACGCAA
ATTGATTCGACAGACTTATGCTGAGACTTTTGGGGAAGATCTGCTTAAAGAGTTGGACAGAGAACTTACTCATGATTTTGAGAAATTGGTGGTAG
TATGGACACTGGATCCTGCAGAACGTGATGCCTATTTGGCTAAGGAAGCTATTAAGAGATGGACAAAAAGCAACTTTGTTCTTGTGGAGATAGCT
TGTACCAGATCTCCTAAAGAACTGGTTTTGGCAAGAGAAGCTTATCATGCTCGTAACAAGAAATCTCTCGAAGAGGACGTTGCTTATCACACTAC
TGGGGATCACCGCAAGCTTTTGGTACCTCTTGTGAGCTCCTACCGATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E284595] | SGN-U577977 | Tomato 200607 | Build 2 | 90 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97616 [Download] [View] | Facility Assigned ID: TPSAJ07TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0124 | Quality Trim Threshold: 14.5 |
Working
