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EST details — SGN-C7799

Search information 
Request: 7799Match: SGN-C7799
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C7799Clone name: cLEC-40-E8
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C174275 is on microarray TOM1: SGN-S1-1-8.2.16.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174275 [TUS-18-F1] Trace: SGN-T197227 EST: SGN-E395901 Direction: 3' Facility: INRA
Clone: SGN-C174275 [TUS-18-F1] Trace: SGN-T197228 EST: SGN-E395902 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E210076Length: 236 bp (656 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E210076 [] (trimmed) CTGGACCTCTCATTCAACAAGTTAGGTGGCAATATCCCAGAAAAACTTGCTAGCCTCACATTTCTTTCCTTCTTAAATTTATCATCTAATGAATT
GGTCGGAATGATACCACAAGGCAGCCAAATTCGAACATTTGGAGAAAGTTCTTTTGAAGGAAACAAGGGGCTATGTGGGTTACCGCTGAACAGAA
CTTGCCAGAATAATTCATCAGACGCACCTTCAGAGCCCGAAGTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E210076] SGN-U567750 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T32140 [Download] [View] Facility Assigned ID: TCAGB28TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.943 Expected Error Rate: 0.0178 Quality Trim Threshold: 14.5