EST details — SGN-C78127
| Search information |
| Request: 78127 | Match: SGN-C78127 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78127 | Clone name: cLES-4-I14 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C186039 is on microarray TOM1: SGN-S1-1-4.4.7.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C186039 [TUS-48-P5] | Trace: SGN-T192816 | EST: SGN-E391490 | Direction: 3' | Facility: INRA |
| Clone: SGN-C186039 [TUS-48-P5] | Trace: SGN-T197762 | EST: SGN-E396436 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282150 | Length: 610 bp (923 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282150 [] (trimmed)
CAAAAAATAAAAATGGCTGCCACTATGAGTTTGACTAAAAACTTCACTACCTTTTCTATTCCTCAATCCTTTCACCCTCAAAATGGAACTCAAAT
TGGCCGGCACTTACAGCGCATTCCCAATTCCAATTACAGTGTTCCAAGTGTCAGATTACACAGATTTGGGTCCAGAATCGAAAACGATGGTCCCC
GAAAAATCGGCCGGGTGCAGATTCGAGCGATGTCGGGTTCATTCGGGTCCCGATTGGAGGAGAGCGTGAAAAAGACTATTACGGAAAACCCAGTA
GTTGTCTACTCCAAGAGTTGGTGTTCGTACTCAACTGAGGTGAAAGTTTTGTTCAAGAGACTTGGTGTAGATCCTCTTGTTATTGAATTGGACGA
AATGGGTCCCCAAGGACCACAACTGCAGAAAGTACTGGAAAGGCTTACTGGACAGCATACGGTTCCCAATGTATTCATTGGGGCCAAACACATAG
GTGGTTGCACAGACACGATTAAGCTGTATCGGAAAGGAGAACTTGAATCTTTGCTATCGGAAGCTAAAGCTGGGAAAACAGAGAGCTAAGCCCTC
TTGAGCTATCCATGCCAAGTGATCCTATCTCATGCTCTCC
TGGCCGGCACTTACAGCGCATTCCCAATTCCAATTACAGTGTTCCAAGTGTCAGATTACACAGATTTGGGTCCAGAATCGAAAACGATGGTCCCC
GAAAAATCGGCCGGGTGCAGATTCGAGCGATGTCGGGTTCATTCGGGTCCCGATTGGAGGAGAGCGTGAAAAAGACTATTACGGAAAACCCAGTA
GTTGTCTACTCCAAGAGTTGGTGTTCGTACTCAACTGAGGTGAAAGTTTTGTTCAAGAGACTTGGTGTAGATCCTCTTGTTATTGAATTGGACGA
AATGGGTCCCCAAGGACCACAACTGCAGAAAGTACTGGAAAGGCTTACTGGACAGCATACGGTTCCCAATGTATTCATTGGGGCCAAACACATAG
GTGGTTGCACAGACACGATTAAGCTGTATCGGAAAGGAGAACTTGAATCTTTGCTATCGGAAGCTAAAGCTGGGAAAACAGAGAGCTAAGCCCTC
TTGAGCTATCCATGCCAAGTGATCCTATCTCATGCTCTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282150] | SGN-U567645 | Tomato 200607 | Build 2 | 27 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T97891 [Download] [View] | Facility Assigned ID: TPSAN55TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0075 | Quality Trim Threshold: 14.5 |
Working
