EST details — SGN-C78554
| Search information |
| Request: 78554 | Match: SGN-C78554 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78554 | Clone name: cLES-6-A2 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179015 is on microarray TOM1: SGN-S1-1-4.3.2.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179015 [TUS-30-K13] | Trace: SGN-T184372 | EST: SGN-E371758 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179015 [TUS-30-K13] | Trace: SGN-T184373 | EST: SGN-E371759 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286960 | Length: 635 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286960 [] (trimmed)
GGAAGGCAAAATAACAGGAGCATAAATGATGAAAATACAGAAAGCTTAGTTTCCATTGTGTGGGATTACTATCAACGCGGTATAGTGGAGGAACT
ATTCGATCCGAGTCTCATGTTGCACAACTACAACACCATCAATGTGAAAAATGAGATCGCGAGAGTTTTACATGTGGGGCTTTTGTGCACTCAAG
AGATCCAAACAGTACGTCCATCCATGTCTAAGGCATTACGGATGATCCTCGAGAAAGAAGAAGAGCTGCCGGCACCTACTAATCCACCATTTGTT
GACGAGAACACCATGGAACTTCATGGTCCTTGGGAGAAGTATTCGCTTAGTCAAGGTGATTCTAGTTCAATTGCCAACTTATCTCATAGTTCATT
TTACCCCAGATGATGATATTTCAAAGCCCTGAAACTGATGCTAACGATTATAAGCATCATTTCGCCTCGTGCTCTTGACGATCATAGTAATCGAG
CAGTTAGTTATAACAACAATTGTGTATCAGTTCCAAACAAAAGTTGGGGTCGGCTATCTGAATTCTCGATTCTACTTAAGCTTTGTTAGCACAGG
AGTATGATTGTATAGGATCTCCTTCATTGGAAAAGGATTGTAACGTAGTATGTATAAATAGGGCT
ATTCGATCCGAGTCTCATGTTGCACAACTACAACACCATCAATGTGAAAAATGAGATCGCGAGAGTTTTACATGTGGGGCTTTTGTGCACTCAAG
AGATCCAAACAGTACGTCCATCCATGTCTAAGGCATTACGGATGATCCTCGAGAAAGAAGAAGAGCTGCCGGCACCTACTAATCCACCATTTGTT
GACGAGAACACCATGGAACTTCATGGTCCTTGGGAGAAGTATTCGCTTAGTCAAGGTGATTCTAGTTCAATTGCCAACTTATCTCATAGTTCATT
TTACCCCAGATGATGATATTTCAAAGCCCTGAAACTGATGCTAACGATTATAAGCATCATTTCGCCTCGTGCTCTTGACGATCATAGTAATCGAG
CAGTTAGTTATAACAACAATTGTGTATCAGTTCCAAACAAAAGTTGGGGTCGGCTATCTGAATTCTCGATTCTACTTAAGCTTTGTTAGCACAGG
AGTATGATTGTATAGGATCTCCTTCATTGGAAAAGGATTGTAACGTAGTATGTATAAATAGGGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286960] | SGN-U585142 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98412 [Download] [View] | Facility Assigned ID: TPSAV01THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0186 | Quality Trim Threshold: 12.5 |
Working
