EST details — SGN-C78860
| Search information |
| Request: 78860 | Match: SGN-C78860 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C78860 | Clone name: cLES-6-P7 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179119 is on microarray TOM1: SGN-S1-1-4.3.2.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179119 [TUS-30-O21] | Trace: SGN-T184478 | EST: SGN-E371864 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179119 [TUS-30-O21] | Trace: SGN-T184479 | EST: SGN-E371865 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287190 | Length: 625 bp (847 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287190 [] (trimmed)
CTCTTCTAAAGAAAGAAAATGTTTGTCAAGATTGCTTGTTTGGTGGTTTTATGCATGTTGATTACAAATGCACCCCATGCAAAGGCAGTGACTTG
TGGCCAAATTCAGGTTGGGGTAGTGAATTGCCTTCCTTATTTGCAGAACCGTGGGCCAATAGGAGGCTGTTGTGGTGTCATTAAAGATTTGCTTA
AGCTTTGTAAGACACCACATGAACGTAGAAAATCATGTAAGTGTGTCAAAAAAGCTGCTAATACTATTAAAGGCATTGATTTTGGTAAAGCTGCT
GGTCTTTCTGGAGTTTGTGGTGTCAAGATTCCTTTTGAGATCAGCCCCTCTGTTGACTGCTCCAAGGTGAAGTGACGTTAATGAAAGAGATTTGT
TTTCCACATCATAATATATAGTAGTAGCACAATTATGTGGACAAGAATAAGATAATTAAGTCGATATTGATCCTGCTTAAATCACGGATTGTGTC
TGTTTCTCTCTTTAGCTTCTTTGTGTGTTTTTTTAGTATCGTAATTGAAATCTTGTAATAGAACTTTGGAGGTTTGTTATATTACAACCCGATCG
TAATAATGTATGTTCTATTTTATTAAGTTCAATGGAAGTGTGATGTACATTACTT
TGGCCAAATTCAGGTTGGGGTAGTGAATTGCCTTCCTTATTTGCAGAACCGTGGGCCAATAGGAGGCTGTTGTGGTGTCATTAAAGATTTGCTTA
AGCTTTGTAAGACACCACATGAACGTAGAAAATCATGTAAGTGTGTCAAAAAAGCTGCTAATACTATTAAAGGCATTGATTTTGGTAAAGCTGCT
GGTCTTTCTGGAGTTTGTGGTGTCAAGATTCCTTTTGAGATCAGCCCCTCTGTTGACTGCTCCAAGGTGAAGTGACGTTAATGAAAGAGATTTGT
TTTCCACATCATAATATATAGTAGTAGCACAATTATGTGGACAAGAATAAGATAATTAAGTCGATATTGATCCTGCTTAAATCACGGATTGTGTC
TGTTTCTCTCTTTAGCTTCTTTGTGTGTTTTTTTAGTATCGTAATTGAAATCTTGTAATAGAACTTTGGAGGTTTGTTATATTACAACCCGATCG
TAATAATGTATGTTCTATTTTATTAAGTTCAATGGAAGTGTGATGTACATTACTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287190] | SGN-U584460 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98642 [Download] [View] | Facility Assigned ID: TPSAW88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 12.5 |
Working
