EST details — SGN-C78860

Search information 
Request: 78860Match: SGN-C78860
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C78860Clone name: cLES-6-P7
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C179119 is on microarray TOM1: SGN-S1-1-4.3.2.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179119 [TUS-30-O21] Trace: SGN-T184478 EST: SGN-E371864 Direction: 3' Facility: INRA
Clone: SGN-C179119 [TUS-30-O21] Trace: SGN-T184479 EST: SGN-E371865 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E287190Length: 625 bp (847 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E287190 [] (trimmed) CTCTTCTAAAGAAAGAAAATGTTTGTCAAGATTGCTTGTTTGGTGGTTTTATGCATGTTGATTACAAATGCACCCCATGCAAAGGCAGTGACTTG
TGGCCAAATTCAGGTTGGGGTAGTGAATTGCCTTCCTTATTTGCAGAACCGTGGGCCAATAGGAGGCTGTTGTGGTGTCATTAAAGATTTGCTTA
AGCTTTGTAAGACACCACATGAACGTAGAAAATCATGTAAGTGTGTCAAAAAAGCTGCTAATACTATTAAAGGCATTGATTTTGGTAAAGCTGCT
GGTCTTTCTGGAGTTTGTGGTGTCAAGATTCCTTTTGAGATCAGCCCCTCTGTTGACTGCTCCAAGGTGAAGTGACGTTAATGAAAGAGATTTGT
TTTCCACATCATAATATATAGTAGTAGCACAATTATGTGGACAAGAATAAGATAATTAAGTCGATATTGATCCTGCTTAAATCACGGATTGTGTC
TGTTTCTCTCTTTAGCTTCTTTGTGTGTTTTTTTAGTATCGTAATTGAAATCTTGTAATAGAACTTTGGAGGTTTGTTATATTACAACCCGATCG
TAATAATGTATGTTCTATTTTATTAAGTTCAATGGAAGTGTGATGTACATTACTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E287190] SGN-U584460 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T98642 [Download] [View] Facility Assigned ID: TPSAW88TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0042 Quality Trim Threshold: 12.5