EST details — SGN-C79323
Search information |
Request: 79323 | Match: SGN-C79323 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C79323 | Clone name: cLES-8-I8 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185499 is on microarray TOM1: SGN-S1-1-8.1.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185499 [TUS-47-I17] | Trace: SGN-T192588 | EST: SGN-E391262 | Direction: 3' | Facility: INRA |
Clone: SGN-C185499 [TUS-47-I17] | Trace: SGN-T197625 | EST: SGN-E396299 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E288557 | Length: 377 bp (1051 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288557 [] (trimmed)
AGAGTTGTCTCTTCTTTTCCGGCCATTTTTTCATCACAAAGAAGAGCTGCTTCAGTTCTACCATCAACACTCACATTACCCAATACCAACAGCTC
CCTGTTATCGTCATCATCACCCATTTCTTCAATTGACAGAACAAAATCAGTTGTTACTCTCCGTAGCAAGACGAGTAGGCGTAGTGGAGTAGTGA
CATGTTCTGCTTCCGACCTCCCAAAGGCACTGCTATTCGACTGCGATGGCGTACTTGTCGATACTGAAAAAGATGGTCATCGTATCTCTTTCAAT
GATAACCTATTCTGAGAAGGAATTGGGTGTAACTTGGGATGTTGATTTGTATGGAGAATTACTCAAAATTGGAGGTGGAAAAGAAAGGATGA
CCTGTTATCGTCATCATCACCCATTTCTTCAATTGACAGAACAAAATCAGTTGTTACTCTCCGTAGCAAGACGAGTAGGCGTAGTGGAGTAGTGA
CATGTTCTGCTTCCGACCTCCCAAAGGCACTGCTATTCGACTGCGATGGCGTACTTGTCGATACTGAAAAAGATGGTCATCGTATCTCTTTCAAT
GATAACCTATTCTGAGAAGGAATTGGGTGTAACTTGGGATGTTGATTTGTATGGAGAATTACTCAAAATTGGAGGTGGAAAAGAAAGGATGA
Unigenes |
Current Unigene builds | |||||
[SGN-E288557] | SGN-U576494 | Tomato 200607 | Build 2 | 65 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T99077 [Download] [View] | Facility Assigned ID: TPSBD52TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0225 | Quality Trim Threshold: 14.5 |