EST details — SGN-C79978
| Search information |
| Request: 79978 | Match: SGN-C79978 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C79978 | Clone name: cLET-10-N19 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184725 is on microarray TOM1: SGN-S1-1-6.1.14.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184725 [TUS-45-I11] | Trace: SGN-T198490 | EST: SGN-E397164 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184725 [TUS-45-I11] | Trace: SGN-T198491 | EST: SGN-E397165 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290763 | Length: 519 bp (650 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290763 [] (trimmed)
GGTTTGTGGGGATATACACGGCCAATTTCATGATCTAATGAAACTTTTCCACACTGGTGGTCATGTGCCAGAGACAAATTACATCTTTATGGGAG
ATTTTGTTGATCGTGGATACAATAGTCTCGAAGTTTTCACAATTTTATTGCTCCTTAAAGCAAGATATCCAGCAAACATTACACTTTTACGCGGG
AACCATGAAAGCAGGCAGCTAACTCAGGTCTATGGATTCTATGATGAATGCCAAAGGAAGTATGGAAATGCAAATGCTTGGCGGTATTGCACTGA
CGTATTTGACTATCTGACTCTCTCGGCAATTATAGATGGAACAGTACTATGTGTCCATGGTGGCCTTTCTCCGGATGTTAGGACTATTGATCAGA
TCAGGGTCATTGATCGTAATTGTGAAATTCCGCATGAAGGGCCTTTTTGTGATCTTATGTGGAGTGATCCTGAAGAGATTGAAACATGGGCAGTA
AGTCCTCGAGGAGCAGGTTGGCTGTTTGGATCCAGGGTTACCAC
ATTTTGTTGATCGTGGATACAATAGTCTCGAAGTTTTCACAATTTTATTGCTCCTTAAAGCAAGATATCCAGCAAACATTACACTTTTACGCGGG
AACCATGAAAGCAGGCAGCTAACTCAGGTCTATGGATTCTATGATGAATGCCAAAGGAAGTATGGAAATGCAAATGCTTGGCGGTATTGCACTGA
CGTATTTGACTATCTGACTCTCTCGGCAATTATAGATGGAACAGTACTATGTGTCCATGGTGGCCTTTCTCCGGATGTTAGGACTATTGATCAGA
TCAGGGTCATTGATCGTAATTGTGAAATTCCGCATGAAGGGCCTTTTTGTGATCTTATGTGGAGTGATCCTGAAGAGATTGAAACATGGGCAGTA
AGTCCTCGAGGAGCAGGTTGGCTGTTTGGATCCAGGGTTACCAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290763] | SGN-U570164 | Tomato 200607 | Build 2 | 28 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104932 [Download] [View] | Facility Assigned ID: TMEBM82TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0001 | Quality Trim Threshold: 14.5 |
Working
