EST details — SGN-C80036

Search information 
Request: 80036Match: SGN-C80036
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C80036Clone name: cLET-11-B11
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179609 is on microarray TOM1: SGN-S1-1-2.4.1.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179609 [TUS-32-D7] Trace: SGN-T186044 EST: SGN-E372891 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292867Length: 565 bp (824 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E292867 [] (trimmed) AAAGTAGAAGAAAAGATGGTTTTCTCCATGAATGAAGAATTTCAGGCTACATTACAGCCAAATTATGATAAACATAGTGAATTAAAAGCCTTTGA
TGACACAAAAGCTGGTGTCAAAGGACTTGTTGATGCTTGCAATAGTACTGAAGTGCCTCGAATATTCGTTCATCCACGAGAAAGCATACAAAACT
CCCCAGGCTATACTGAGGAGGAGTTTGTTTTTCCTGTAATAGATCTTGAAGGCATTGATCATCCAATAAGGCATAAAGATATAGTTGACAAAGTT
CGAGATGCATCAGAGACATGGGGATTTTTTCAAGTAGTCAATCATGACATTCCATTACCTGTCCTTGAAGAAATGTTGCAAGGAGCACGAAGATT
TTTCGAGCAAGATGTGGAGATAAAGAAACGATATTACACTCGAGATACTACGAAGAAAGTAGCACATGTTAGCAACTTTGATTTGTTTAGCCCCT
CTGTTCCAGCAGCTAGCTGGAGAGACTCACTTTACTGTTTTATGTGTCCTAATCCTCCTAGTCCAGAGGAATTTCCCACAGTATGTAGCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292867] SGN-U577938 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T105330 [Download] [View] Facility Assigned ID: TMEBQ06TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0042 Quality Trim Threshold: 14.5