EST details — SGN-C80772
| Search information |
| Request: 80772 | Match: SGN-C80772 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C80772 | Clone name: cLET-13-F3 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C182147 is on microarray TOM1: SGN-S1-1-8.2.10.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182147 [TUS-38-N1] | Trace: SGN-T194726 | EST: SGN-E393400 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182147 [TUS-38-N1] | Trace: SGN-T199331 | EST: SGN-E398005 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293961 | Length: 438 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293961 [] (trimmed)
TTTCAAAAGTATATTACGAAGGGATATGTCTCTGAGACTGAATCTGGAAAGAGACTTGCTCAGGTTGTGAGTGATCCAAGCTTGACAAAATCAGG
TGTCTACTGGAGCTGGAACAAAGACTCAGCTTCTTTCGAAAACCAGTTGTCCGAAGAAGCAAGTGATGCAGAGAAAGCGCGTAAAGTGTGGGAAG
TCAGTGAGAAACTCGTTGGTTTGGCTTAAATTTTGAACTAACCTTAGTCATCGTCGATGAAAACAGGAAAAATGACTTCGCGAGTGAGAATTTGT
AACCGAAATTTCTAGGATGTTGTAAAGAGAAGTGTCATTGTAGTTAGGATTGAAAATAAAGATCACTCAACTTGTTTTGTTTTGTGTTTGGAAAA
TGTCACTAATTTGCCTTTGAAGTTAAATGAAGTGATGGTTCATGAGCATTGTTCAATT
TGTCTACTGGAGCTGGAACAAAGACTCAGCTTCTTTCGAAAACCAGTTGTCCGAAGAAGCAAGTGATGCAGAGAAAGCGCGTAAAGTGTGGGAAG
TCAGTGAGAAACTCGTTGGTTTGGCTTAAATTTTGAACTAACCTTAGTCATCGTCGATGAAAACAGGAAAAATGACTTCGCGAGTGAGAATTTGT
AACCGAAATTTCTAGGATGTTGTAAAGAGAAGTGTCATTGTAGTTAGGATTGAAAATAAAGATCACTCAACTTGTTTTGTTTTGTGTTTGGAAAA
TGTCACTAATTTGCCTTTGAAGTTAAATGAAGTGATGGTTCATGAGCATTGTTCAATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293961] | SGN-U580321 | Tomato 200607 | Build 2 | 88 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T105804 [Download] [View] | Facility Assigned ID: TMEBY26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 12.5 |
Working
