EST details — SGN-C81344
Search information |
Request: 81344 | Match: SGN-C81344 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C81344 | Clone name: cLET-15-N2 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185643 is on microarray TOM1: SGN-S1-1-8.3.9.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E293632 | Length: 470 bp (931 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E293632 [] (trimmed)
TAACCCAGAGTCATCAAGTAATGAAGAACCTGTGCTTTTCGACACTTCCATTATTCCTTGGTGGGCATGGATGAAGAGATTCCATCTCCCTGAAG
CTGAACTTCTCAATGGTCGTGCTGCAATGGTTGGTTTCTTTATGGCCTATTTTGTGGATAGCTTGACTGGGGTAGGCCTTGTTGACCAAATGGGG
AACTTCTTTTGCAAAACACTGTTGCTTGTAGCTGCGGCCGGTGTGCTTCTGATACGGAAGAATGAGGATATAGAAACACTCAAAAAGTTGGTGGA
CGAGTCTACTTTTTATGACAAGCAATGGAAAGCGTCTTGGCAAGATGAGAACTCAAGCAGTTCAAAGGACTCTTGAACACATTTTCTTACTTAAG
CTATGATTTTCATATATTTGGAAGAATGCGATTAGGTGGTGATGACACAATGCTTGTCAAAAGAGAGCCTAAAATCTCGATTCACCATTT
CTGAACTTCTCAATGGTCGTGCTGCAATGGTTGGTTTCTTTATGGCCTATTTTGTGGATAGCTTGACTGGGGTAGGCCTTGTTGACCAAATGGGG
AACTTCTTTTGCAAAACACTGTTGCTTGTAGCTGCGGCCGGTGTGCTTCTGATACGGAAGAATGAGGATATAGAAACACTCAAAAAGTTGGTGGA
CGAGTCTACTTTTTATGACAAGCAATGGAAAGCGTCTTGGCAAGATGAGAACTCAAGCAGTTCAAAGGACTCTTGAACACATTTTCTTACTTAAG
CTATGATTTTCATATATTTGGAAGAATGCGATTAGGTGGTGATGACACAATGCTTGTCAAAAGAGAGCCTAAAATCTCGATTCACCATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E293632] | SGN-U578160 | Tomato 200607 | Build 2 | 92 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T106583 [Download] [View] | Facility Assigned ID: TMECH73TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.953 | Expected Error Rate: 0.0367 | Quality Trim Threshold: 12.5 |