EST details — SGN-C81508
| Search information |
| Request: 81508 | Match: SGN-C81508 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81508 | Clone name: cLET-16-O14 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184833 is on microarray TOM1: SGN-S1-1-2.1.14.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184833 [TUS-45-M23] | Trace: SGN-T198590 | EST: SGN-E397264 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184833 [TUS-45-M23] | Trace: SGN-T200015 | EST: SGN-E398689 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292486 | Length: 531 bp (920 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292486 [] (trimmed)
GTGGTAAACAGAGTTTGGAAACAATATGCCTTCTGCTTGCATACAAAATCAAATATCCTGAAAACTTCTTTCTCTTGAGAGGAAATCATGAATGT
GCTTCTATTAATCGAATTTATGGTTTCTATGATGAATGTAAGCGCCGATTCAATGTGAAGCTATGGAAATGCTTCACAGAATGTTTCAATTGTCT
TCCCGTTGCTGCTCTCATAGATGAAAAAATACTGTGCATGCATGGTGGTCTTTCTCCAGATTTAACAAACTTGGATCAGATAAGAAATTTACCTC
GTCCAACTGATGTTCCAGATTCTGGGTTGCTGTGTGATTTACTTTGGTCAGATCCTAGCCGGGAAGTTAAAGGTTGGGGAATGAATGATAGGGGA
GTTTCATATACTTTTGGTCCTGATAAGGTTGCAGAATTCTTGATGCAACACGATATGGACCTTGTTTGTCGTGCCCACCAGGTTGTTGAAGATGG
TTATGAATTTTTCGCTGAGAGGCAGCTAGTGACAATATTTTCCGCCCCAAACTACT
GCTTCTATTAATCGAATTTATGGTTTCTATGATGAATGTAAGCGCCGATTCAATGTGAAGCTATGGAAATGCTTCACAGAATGTTTCAATTGTCT
TCCCGTTGCTGCTCTCATAGATGAAAAAATACTGTGCATGCATGGTGGTCTTTCTCCAGATTTAACAAACTTGGATCAGATAAGAAATTTACCTC
GTCCAACTGATGTTCCAGATTCTGGGTTGCTGTGTGATTTACTTTGGTCAGATCCTAGCCGGGAAGTTAAAGGTTGGGGAATGAATGATAGGGGA
GTTTCATATACTTTTGGTCCTGATAAGGTTGCAGAATTCTTGATGCAACACGATATGGACCTTGTTTGTCGTGCCCACCAGGTTGTTGAAGATGG
TTATGAATTTTTCGCTGAGAGGCAGCTAGTGACAATATTTTCCGCCCCAAACTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292486] | SGN-U578493 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T106619 [Download] [View] | Facility Assigned ID: TMECJ91TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |
Working
