EST details — SGN-C81846
| Search information |
| Request: 81846 | Match: SGN-C81846 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C81846 | Clone name: cLET-18-I17 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181860 is on microarray TOM1: SGN-S1-1-7.2.10.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181860 [TUS-38-B2] | Trace: SGN-T187750 | EST: SGN-E374480 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181860 [TUS-38-B2] | Trace: SGN-T187816 | EST: SGN-E374546 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E293343 | Length: 509 bp (925 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E293343 [] (trimmed)
CCGGAAGTGATTTAAAGAATTTATGTGTCACAGCTGCTCATTGCCCAATTAGAGAAATATTGGAGAAAGAGAAAAAGGAAAAAGCATTGGCAGTT
TCAGATAGCAGGCCAGTCCCTGCATTGCATAGTAGTGTGGACGTTCGCCCCCTTAACAAGGATGATTTTAAATATGCACATGAACAGGTATGTGC
TAGTGTATCTTCAGAATCGGCAAACATGAATGAGTTACTCCAGTGGAATGAATTGTATGGAGAAGGTGGATCAAGGAAGAAGAAATCTCTCAGTT
ACTTCATGTAGAGACATGTGAAGTGTATAGTGTTGCTTTATTTATTTACCCAAGTTGGTAGGGACGGGTCCTGCATGCATGGAAATCCATTTCAG
GTTCCCTGGAGTCCAAACCCCCAACCGCGGAAAACTGTGTATCATAGTTAGTTAATAGTTATGAAATATCTATCTATCCGAAGCTTGTCTTCCAA
TTTTCACCTTATTGGATCTCCTCTGTATATACAA
TCAGATAGCAGGCCAGTCCCTGCATTGCATAGTAGTGTGGACGTTCGCCCCCTTAACAAGGATGATTTTAAATATGCACATGAACAGGTATGTGC
TAGTGTATCTTCAGAATCGGCAAACATGAATGAGTTACTCCAGTGGAATGAATTGTATGGAGAAGGTGGATCAAGGAAGAAGAAATCTCTCAGTT
ACTTCATGTAGAGACATGTGAAGTGTATAGTGTTGCTTTATTTATTTACCCAAGTTGGTAGGGACGGGTCCTGCATGCATGGAAATCCATTTCAG
GTTCCCTGGAGTCCAAACCCCCAACCGCGGAAAACTGTGTATCATAGTTAGTTAATAGTTATGAAATATCTATCTATCCGAAGCTTGTCTTCCAA
TTTTCACCTTATTGGATCTCCTCTGTATATACAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E293343] | SGN-U567311 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T107168 [Download] [View] | Facility Assigned ID: TMECQ57TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 12.5 |
Working
