EST details — SGN-C82149

Search information 
Request: 82149Match: SGN-C82149
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C82149Clone name: cLET-1-B12
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179381 is on microarray TOM1: SGN-S1-1-6.2.2.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179381 [TUS-31-J19] Trace: SGN-T185408 EST: SGN-E373270 Direction: 3' Facility: INRA
Clone: SGN-C179381 [TUS-31-J19] Trace: SGN-T185409 EST: SGN-E373271 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292424Length: 608 bp (892 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292424 [] (trimmed) CCCCGGGCTGCAAGCANCAATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCATGGTTGCACCCT
TCACTGGACTCAAGTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGC
ATGCAGGTGTGGCCACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGTA
CCTATTGAAAAATGGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGATG
GCAGATACTGGACCATGTGGAAGTTGCCCATGTTCGGGTGCACTGATGCAACCCACGTCTTGGCTGAGGTGCACGAGGCAAAGAAGGCTTACCCA
CAGGCATGGGTCCGTATCATCGGATTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAAGATACTAAATGTGTAT
ATGTCAACAGTGAGAAACTGTTCGCATTTTCCGTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292424] SGN-U579638 Tomato 200607 Build 2 317 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T102698 [Download] [View] Facility Assigned ID: TMEAD06TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0170 Quality Trim Threshold: 12.5