EST details — SGN-C82445
| Search information |
| Request: 82445 | Match: SGN-C82445 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82445 | Clone name: cLET-1-P1 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179585 is on microarray TOM1: SGN-S1-1-2.3.1.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179585 [TUS-32-C7] | Trace: SGN-T185717 | EST: SGN-E373054 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179585 [TUS-32-C7] | Trace: SGN-T185718 | EST: SGN-E373055 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292417 | Length: 678 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292417 [] (trimmed)
AATGCCGGCCGGTCATGGTTTGAGGTCTCGAACGAGAGATTCATTCTCTCGCGCCTTCAGGAAGAAGGGTACCATCGCACTTTCGACCTACTTGA
GGATTTTCAAAATCGGAGATTATGTTGATATCAAGGTGAATGGTGCTATTCACAAGGGAATGCCTCACAAGTTCTACCATGGACGTACTGGTCGT
GTTTGGAATGTTACCAAACGCGCCGTTGGTGTTGAAGTCAACAAGCAGGTTCGTAACAAGATCTTAAGAAAGAGGATCCATGTGAGGATTGAGCA
TGTCCAGCAATCTCGATGCACCGAAGAAGTCAGGGAAAGGATCAAGAAGAATGACCAACTTAAGGCTGACGCCAAGGCTAGAGGAGAAGTCATCA
GCACAAAAAGGCAACCACTAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTACTCTGGAGACAGTTACCCCCATACCATATGATGTGGTTAAT
GATTTGAAGGGAGGATATTGATCTTAATCTGTTTCTGAGAGGTTGTTTTTTCTATTTGGTTTTTCTGAAATTGAAAGACAGAATTAGTTTTGTTG
GTGTCAACTCCAGACATTGCTTGTTAGTTAAATTTTGTTTACATTGCCATTAGAGGCCTTTTGTTGAACTTTTACTACAAAGGTGAATTCAAGTA
TGTCTATCTATTA
GGATTTTCAAAATCGGAGATTATGTTGATATCAAGGTGAATGGTGCTATTCACAAGGGAATGCCTCACAAGTTCTACCATGGACGTACTGGTCGT
GTTTGGAATGTTACCAAACGCGCCGTTGGTGTTGAAGTCAACAAGCAGGTTCGTAACAAGATCTTAAGAAAGAGGATCCATGTGAGGATTGAGCA
TGTCCAGCAATCTCGATGCACCGAAGAAGTCAGGGAAAGGATCAAGAAGAATGACCAACTTAAGGCTGACGCCAAGGCTAGAGGAGAAGTCATCA
GCACAAAAAGGCAACCACTAGGACCCAAACCAGGGTTCATGGTTGAAGGTGCTACTCTGGAGACAGTTACCCCCATACCATATGATGTGGTTAAT
GATTTGAAGGGAGGATATTGATCTTAATCTGTTTCTGAGAGGTTGTTTTTTCTATTTGGTTTTTCTGAAATTGAAAGACAGAATTAGTTTTGTTG
GTGTCAACTCCAGACATTGCTTGTTAGTTAAATTTTGTTTACATTGCCATTAGAGGCCTTTTGTTGAACTTTTACTACAAAGGTGAATTCAAGTA
TGTCTATCTATTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292417] | SGN-U578089 | Tomato 200607 | Build 2 | 121 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102691 [Download] [View] | Facility Assigned ID: TMEAC85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0112 | Quality Trim Threshold: 12.5 |
Working
