EST details — SGN-C82461
| Search information |
| Request: 82461 | Match: SGN-C82461 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C82461 | Clone name: cLET-1-P4 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179597 is on microarray TOM1: SGN-S1-1-6.3.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179597 [TUS-32-C19] | Trace: SGN-T1537 | EST: SGN-E378699 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C179597 [TUS-32-C19] | Trace: SGN-T185810 | EST: SGN-E373147 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179597 [TUS-32-C19] | Trace: SGN-T185811 | EST: SGN-E373148 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292262 | Length: 555 bp (898 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292262 [] (trimmed)
CTACCAAGGTCGACAGAAGGGGAGCCTATATCGTGAGGCAAGCAGCTAAGAGCATTGTTGCTAACGGTCTTGCCAGAAGGTGCATTGTTCAAGTT
TCATATGCCATCGGTGTGCCTGAGCCATTGTCCGTCTTTGTGGACACTTATGGAACTGGGAAGATCCCTGACAAGGAGATTCTCAACATTGTGAA
GGAGAACTTTGATTTCAGGCCCGGAATGATTTCCATTAACCTCGATCTACTGAGGGGTGGCAATGGTCGATTCTTGAAGACTGCTGCCTATGGGC
ATTTTGGTAGAGATGATCCTGACTTCACATGGGAAGTAGTTAAGCCTCTCAAGTGGGACAAGCCTGAAGCTTAAACTGGAATATAAATGTTTCAT
CCCTTATGTGACAAAGCTTACTATAGGCTGCATGTTGGCTTTTGTTTCGCCTTTTCTTTTGATTTTTTATTTCTTATATTTGTTCTTTTTTTAAT
GTGGTTTTAGAAATATTGTTCTAAGTTTCTTGGATAAGATAAAGTTTGAAGAATATGATATCATGGATTGAGATATTAAA
TCATATGCCATCGGTGTGCCTGAGCCATTGTCCGTCTTTGTGGACACTTATGGAACTGGGAAGATCCCTGACAAGGAGATTCTCAACATTGTGAA
GGAGAACTTTGATTTCAGGCCCGGAATGATTTCCATTAACCTCGATCTACTGAGGGGTGGCAATGGTCGATTCTTGAAGACTGCTGCCTATGGGC
ATTTTGGTAGAGATGATCCTGACTTCACATGGGAAGTAGTTAAGCCTCTCAAGTGGGACAAGCCTGAAGCTTAAACTGGAATATAAATGTTTCAT
CCCTTATGTGACAAAGCTTACTATAGGCTGCATGTTGGCTTTTGTTTCGCCTTTTCTTTTGATTTTTTATTTCTTATATTTGTTCTTTTTTTAAT
GTGGTTTTAGAAATATTGTTCTAAGTTTCTTGGATAAGATAAAGTTTGAAGAATATGATATCATGGATTGAGATATTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292262] | SGN-U577991 | Tomato 200607 | Build 2 | 93 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102536 [Download] [View] | Facility Assigned ID: TMEAD86TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0167 | Quality Trim Threshold: 12.5 |
Working
