EST details — SGN-C82461

Search information 
Request: 82461Match: SGN-C82461
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C82461Clone name: cLET-1-P4
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C179597 is on microarray TOM1: SGN-S1-1-6.3.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C179597 [TUS-32-C19] Trace: SGN-T1537 EST: SGN-E378699 Direction: 5' Facility: Giov. Lab
Clone: SGN-C179597 [TUS-32-C19] Trace: SGN-T185810 EST: SGN-E373147 Direction: 3' Facility: INRA
Clone: SGN-C179597 [TUS-32-C19] Trace: SGN-T185811 EST: SGN-E373148 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E292262Length: 555 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E292262 [] (trimmed) CTACCAAGGTCGACAGAAGGGGAGCCTATATCGTGAGGCAAGCAGCTAAGAGCATTGTTGCTAACGGTCTTGCCAGAAGGTGCATTGTTCAAGTT
TCATATGCCATCGGTGTGCCTGAGCCATTGTCCGTCTTTGTGGACACTTATGGAACTGGGAAGATCCCTGACAAGGAGATTCTCAACATTGTGAA
GGAGAACTTTGATTTCAGGCCCGGAATGATTTCCATTAACCTCGATCTACTGAGGGGTGGCAATGGTCGATTCTTGAAGACTGCTGCCTATGGGC
ATTTTGGTAGAGATGATCCTGACTTCACATGGGAAGTAGTTAAGCCTCTCAAGTGGGACAAGCCTGAAGCTTAAACTGGAATATAAATGTTTCAT
CCCTTATGTGACAAAGCTTACTATAGGCTGCATGTTGGCTTTTGTTTCGCCTTTTCTTTTGATTTTTTATTTCTTATATTTGTTCTTTTTTTAAT
GTGGTTTTAGAAATATTGTTCTAAGTTTCTTGGATAAGATAAAGTTTGAAGAATATGATATCATGGATTGAGATATTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E292262] SGN-U577991 Tomato 200607 Build 2 93 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T102536 [Download] [View] Facility Assigned ID: TMEAD86TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.961 Expected Error Rate: 0.0167 Quality Trim Threshold: 12.5