EST details — SGN-C84211
| Search information |
| Request: 84211 | Match: SGN-C84211 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C84211 | Clone name: cLET-27-P21 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184736 is on microarray TOM1: SGN-S1-1-3.1.14.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184736 [TUS-45-I22] | Trace: SGN-T196563 | EST: SGN-E395237 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184736 [TUS-45-I22] | Trace: SGN-T198627 | EST: SGN-E397301 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E296057 | Length: 495 bp (720 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E296057 [] (trimmed)
ACAGGTGGAGAGTTATTCGATCAAATTGTAAATCATGGACTAATGCGTGAAGAAGAGGCAAGGAAGTATTTTCAGCACCTTATTCATACGGCTGA
TTATTGCCATAGTAGAGGAGTCTATCACCGAGATCTAAAGCCTGAAAATTTACTGTTGGATTCTTCGGGTGACCTTAAGGTATCTGATTTTGGAT
TGAGTGCTCTATCCCAGCAAGTCAGGGCTGATGGCTTACTGCATACCACCTGCGGAACTCCTAACTATGTTGCACCTGAGGTACTGAATGATCGA
GGATACGATGGGGCAACAGCAGACCTCTGGTCGTGCGGAGTCATACTCTTTGTACTGCTTGCAGGTTACTTGCCTTTTGATGACTCCAATCTTAT
GAACCTCTATAACAAAATCTCTGCTGCTGAATTTACGTGCCCACCTTGGATCTCTTTTGGTGCTATCAAGTTGATTACTCGCATCTTGGATCCGA
ATCCTACGACAGTATGTTTT
TTATTGCCATAGTAGAGGAGTCTATCACCGAGATCTAAAGCCTGAAAATTTACTGTTGGATTCTTCGGGTGACCTTAAGGTATCTGATTTTGGAT
TGAGTGCTCTATCCCAGCAAGTCAGGGCTGATGGCTTACTGCATACCACCTGCGGAACTCCTAACTATGTTGCACCTGAGGTACTGAATGATCGA
GGATACGATGGGGCAACAGCAGACCTCTGGTCGTGCGGAGTCATACTCTTTGTACTGCTTGCAGGTTACTTGCCTTTTGATGACTCCAATCTTAT
GAACCTCTATAACAAAATCTCTGCTGCTGAATTTACGTGCCCACCTTGGATCTCTTTTGGTGCTATCAAGTTGATTACTCGCATCTTGGATCCGA
ATCCTACGACAGTATGTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E296057] | SGN-U577671 | Tomato 200607 | Build 2 | 63 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T109264 [Download] [View] | Facility Assigned ID: TMEEC95TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0116 | Quality Trim Threshold: 14.5 |
Working
