EST details — SGN-C85610
| Search information |
| Request: 85610 | Match: SGN-C85610 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C85610 | Clone name: cLET-3-I11 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183230 is on microarray TOM1: SGN-S1-1-5.3.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183230 [TUS-41-K4] | Trace: SGN-T196510 | EST: SGN-E395184 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183230 [TUS-41-K4] | Trace: SGN-T200117 | EST: SGN-E398791 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289503 | Length: 628 bp (916 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289503 [] (trimmed)
AAAAATGGCTACTTCTGCAATTCAACATTCTGCATTTGCTGGCCAAACAGCACTTAAGTCACAAAATGAATTTATTAGGAAAATTGGTAGCTTTG
AAGGTGGACGTGTCACCATGCGACGTACTGTCAAAAGTGCACCACAAAGCATATGGTATGGAGAAGATAGGCCAAAGTACTTGGGACCATTTTCT
GAGCAAACACCATCATACTTGACTGGTGAGTTTCCAGGTGACTATGGATGGGACACTGCTGGACTCTCAGCTGACCCTGAGACATTTGCAAGGAA
CCGTGAGCTTGAGGTGATACATTGTCGTTGGGCTATGCTTGGTGCTTTGGGGTGTGTTTTCCCTGAAATATTGTCTAAGAATGGTGTTACATTTG
GTGAAGCTGTTTGGTTCAAGGCTGGATCTCAAATTTTCTCCGAAGGCGGTCTTGACTACCTTGGTAACCCAAACCTTATCCATGCTCAGAGCATA
CTTGCCATTTGGGCATCACAAGTTGTGTTAATGGGCTTTGTTGAAGGATATAGAGTTGGTGGAGGTCCATTAAGTGAAGGCCTCGACAAGATCTA
CCCGGGGGGTGCTTTCGACCCACTGGGCCTTGCTGATGATCCGGAGGCATTTGCTGAG
AAGGTGGACGTGTCACCATGCGACGTACTGTCAAAAGTGCACCACAAAGCATATGGTATGGAGAAGATAGGCCAAAGTACTTGGGACCATTTTCT
GAGCAAACACCATCATACTTGACTGGTGAGTTTCCAGGTGACTATGGATGGGACACTGCTGGACTCTCAGCTGACCCTGAGACATTTGCAAGGAA
CCGTGAGCTTGAGGTGATACATTGTCGTTGGGCTATGCTTGGTGCTTTGGGGTGTGTTTTCCCTGAAATATTGTCTAAGAATGGTGTTACATTTG
GTGAAGCTGTTTGGTTCAAGGCTGGATCTCAAATTTTCTCCGAAGGCGGTCTTGACTACCTTGGTAACCCAAACCTTATCCATGCTCAGAGCATA
CTTGCCATTTGGGCATCACAAGTTGTGTTAATGGGCTTTGTTGAAGGATATAGAGTTGGTGGAGGTCCATTAAGTGAAGGCCTCGACAAGATCTA
CCCGGGGGGTGCTTTCGACCCACTGGGCCTTGCTGATGATCCGGAGGCATTTGCTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289503] | SGN-U580120 | Tomato 200607 | Build 2 | 67 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103174 [Download] [View] | Facility Assigned ID: TMEAI54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0095 | Quality Trim Threshold: 14.5 |
Working
