EST details — SGN-C86874
| Search information |
| Request: 86874 | Match: SGN-C86874 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C86874 | Clone name: cLET-44-J10 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179893 is on microarray TOM1: SGN-S1-1-6.4.1.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179893 [TUS-32-P3] | Trace: SGN-T186105 | EST: SGN-E372952 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179893 [TUS-32-P3] | Trace: SGN-T186106 | EST: SGN-E372953 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E298734 | Length: 519 bp (949 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E298734 [] (trimmed)
CGGACTTTTTGGGTCGTAGGCCGGATCCTCTCTCTCTCTCTCTCAAGGGCGATTCGAGACTATACATAAAAACGGCGAAGGTTGCTGTTGCTTCC
AATAGTAGCGAAGGCGCCAGCGGTATTACTTCTCCTATCTAAGACGGAGACGTCTTAATTATAGCCAACGGAAACACCCTCGGTTCAAAATTCGG
ATCCTACGGTCCTTACGCTTACGTTTCCGGCGACATTATAAACGGTCGCACGCTAATAGGATTATACCATAACTTCGTCGGCAAGGAGTACGGTG
TCTTCGAAGACGAGGCGTGCTACGTCGGCGACTCCGGCAATACTATAGGCGGAGAAGACGGCATCGTACTCCCCATCACCATTGATAAGTAGACC
TTCTCTATCGGCTTATAGCTTACTACCGGAAGAGTCGCCGCCGCCTACGTCGACTTCGACGACTCCGGAAAGGGAGGATACGAGTCTAGCAAAAG
TATTGGAAACGTCGGTGGAAGGACCGTCCGCGGCACCACCGGTT
AATAGTAGCGAAGGCGCCAGCGGTATTACTTCTCCTATCTAAGACGGAGACGTCTTAATTATAGCCAACGGAAACACCCTCGGTTCAAAATTCGG
ATCCTACGGTCCTTACGCTTACGTTTCCGGCGACATTATAAACGGTCGCACGCTAATAGGATTATACCATAACTTCGTCGGCAAGGAGTACGGTG
TCTTCGAAGACGAGGCGTGCTACGTCGGCGACTCCGGCAATACTATAGGCGGAGAAGACGGCATCGTACTCCCCATCACCATTGATAAGTAGACC
TTCTCTATCGGCTTATAGCTTACTACCGGAAGAGTCGCCGCCGCCTACGTCGACTTCGACGACTCCGGAAAGGGAGGATACGAGTCTAGCAAAAG
TATTGGAAACGTCGGTGGAAGGACCGTCCGCGGCACCACCGGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E298734] | SGN-U600580 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T111370 [Download] [View] | Facility Assigned ID: TMEGT53TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 20.5 |
Working
