EST details — SGN-C87600
| Search information |
| Request: 87600 | Match: SGN-C87600 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C87600 | Clone name: cLET-5-E13 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183523 is on microarray TOM1: SGN-S1-1-8.3.1.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183523 [TUS-42-G9] | Trace: SGN-T195485 | EST: SGN-E394159 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183523 [TUS-42-G9] | Trace: SGN-T195950 | EST: SGN-E399151 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183523 [TUS-42-G9] | Trace: SGN-T200449 | EST: SGN-E399557 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290166 | Length: 479 bp (836 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290166 [] (trimmed)
GGTTTTTTCTTTGTAATATAATTTTCATTCTCAAACGAAATCCAATATGCAGCGAAGTGCTGAACGAATCGCCACCATCTCAGCCCATCTTAACC
CTTCTCCTTCTTCTCACCAGATGGAGGGATTGAGTGCAGCTAATTGCAGGGCGAAAGGGGGTTCTCCGGGGTTCAAAGTTGCGATCTTGGGTGCT
GCAGGAGGTATTGGTCAGCCACTTGCAATGCTTATGAAGATGAATCCTTTGGTTTCGGTTCTGCATCTTTATGATGTTGCAAATACCCCTGGTGT
AACTGCTGATATTAGCCACATGGATACTGGTGCTGTGGTTCGTGGTTTTCTAGGACCTCAACAATTAGAAGATGCTCTCACTGGCATGGACCTCG
TAATAATCCCTGCTGGTGTTCCTAGAAAACCAGGCATGACAAGAGATGATCTTTTCAACATAAATGCAGGAATCGTGAAGACTTTATGTGAAGGA
ATTG
CTTCTCCTTCTTCTCACCAGATGGAGGGATTGAGTGCAGCTAATTGCAGGGCGAAAGGGGGTTCTCCGGGGTTCAAAGTTGCGATCTTGGGTGCT
GCAGGAGGTATTGGTCAGCCACTTGCAATGCTTATGAAGATGAATCCTTTGGTTTCGGTTCTGCATCTTTATGATGTTGCAAATACCCCTGGTGT
AACTGCTGATATTAGCCACATGGATACTGGTGCTGTGGTTCGTGGTTTTCTAGGACCTCAACAATTAGAAGATGCTCTCACTGGCATGGACCTCG
TAATAATCCCTGCTGGTGTTCCTAGAAAACCAGGCATGACAAGAGATGATCTTTTCAACATAAATGCAGGAATCGTGAAGACTTTATGTGAAGGA
ATTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290166] | SGN-U574918 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103614 [Download] [View] | Facility Assigned ID: TMEAQ31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0071 | Quality Trim Threshold: 14.5 |
Working
