EST details — SGN-C87950
Search information |
Request: 87950 | Match: SGN-C87950 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C87950 | Clone name: cLET-6-H1 |
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Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184835 is on microarray TOM1: SGN-S1-1-8.2.14.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C184835 [TUS-45-N1] | Trace: SGN-T198736 | EST: SGN-E397410 | Direction: 5' | Facility: INRA |
Clone: SGN-C184835 [TUS-45-N1] | Trace: SGN-T200050 | EST: SGN-E398724 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E291591 | Length: 495 bp (903 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E291591 [] (trimmed)
GTTGTTGAATTTTATGAAGCTGCTGCTTTTGAGATCAAGAGCTTAGTGAAGGAACCAATGGGTGCAGGGCTGAAGAAAAACTCAGATGGGGTTCA
GAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGATGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCC
CAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCATGCACCA
GCCGCCACGTCAACTGAAGAGGTGGAGGTGAAGGTGAAGGATAACGATAACGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCACC
TGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAATGTGGAAGAAGCACCAAAGGTGGTTTAATGATCGTATACGTCTAAAAATTTGCATGTTT
ATCTTCTTCTTTTTTTTAAT
GAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGATGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCC
CAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCATGCACCA
GCCGCCACGTCAACTGAAGAGGTGGAGGTGAAGGTGAAGGATAACGATAACGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCACC
TGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAATGTGGAAGAAGCACCAAAGGTGGTTTAATGATCGTATACGTCTAAAAATTTGCATGTTT
ATCTTCTTCTTTTTTTTAAT
Unigenes |
Current Unigene builds | |||||
[SGN-E291591] | SGN-U580472 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T103844 [Download] [View] | Facility Assigned ID: TMEAW37TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0220 | Quality Trim Threshold: 14.5 |