EST details — SGN-C87950
| Search information |
| Request: 87950 | Match: SGN-C87950 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C87950 | Clone name: cLET-6-H1 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184835 is on microarray TOM1: SGN-S1-1-8.2.14.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184835 [TUS-45-N1] | Trace: SGN-T198736 | EST: SGN-E397410 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184835 [TUS-45-N1] | Trace: SGN-T200050 | EST: SGN-E398724 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E291591 | Length: 495 bp (903 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E291591 [] (trimmed)
GTTGTTGAATTTTATGAAGCTGCTGCTTTTGAGATCAAGAGCTTAGTGAAGGAACCAATGGGTGCAGGGCTGAAGAAAAACTCAGATGGGGTTCA
GAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGATGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCC
CAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCATGCACCA
GCCGCCACGTCAACTGAAGAGGTGGAGGTGAAGGTGAAGGATAACGATAACGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCACC
TGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAATGTGGAAGAAGCACCAAAGGTGGTTTAATGATCGTATACGTCTAAAAATTTGCATGTTT
ATCTTCTTCTTTTTTTTAAT
GAAATTCCTTGATGACCTTGTCAAGATTGAATTTCCGGGATCAAAAGCTGTTAGCGATGCAAGTTCAAACTTTGGGCCTTCCTATGTATCGGGCC
CAATTATTTTTGTGTTCGAAAAAGTTTCCACTTTCATAGTCACAGAAGATAAGAAGGAAGAGGAACCCGCGGCTGCTGATGACGTGCATGCACCA
GCCGCCACGTCAACTGAAGAGGTGGAGGTGAAGGTGAAGGATAACGATAACGAGATAGTTATTGAGTCTGGAGAACCAAACAAGGAAGAAGCACC
TGCTACTGTTGTTGCTGACGTGGCACCTGCAACTAATGTGGAAGAAGCACCAAAGGTGGTTTAATGATCGTATACGTCTAAAAATTTGCATGTTT
ATCTTCTTCTTTTTTTTAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E291591] | SGN-U580472 | Tomato 200607 | Build 2 | 105 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103844 [Download] [View] | Facility Assigned ID: TMEAW37TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0220 | Quality Trim Threshold: 14.5 |
Working
