| genbank/nr [blastx] | Showing best 51 hits recorded |
| Match: gi|1173137|sp|P46279|RPB7_SOYBN |
score: 296.2 |
e-value: 1.6e-79 |
Identity: 93.42% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|1173137|sp|P46279|RPB7_SOYBN DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE (RNA POLYMERASE II SUBUNIT 5) gi|322... |
| Match: gi|15237831|ref|NP_200726.1| |
score: 288.9 |
e-value: 2.6e-77 |
Identity: 91.45% |
Span: 456bp (82.6%) |
Frame: 1 |
| NRPB7; DNA-directed RNA polymerase/ RNA binding [Arabidopsis thaliana] >gi585917|sp|P38421.1|RPB7_ARATH RecName: Full... |
| Match: gi|4505947|ref|NP_002687.1| |
score: 180.6 |
e-value: 9.9e-45 |
Identity: 52.94% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|4505947|ref|NP_002687.1| DNA directed RNA polymerase II polypeptide G; DNA directed RNA polymerase II 19 kda polyp... |
| Match: gi|28278826|gb|AAH45299.1| |
score: 180.6 |
e-value: 9.9e-45 |
Identity: 53.59% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|28278826|gb|AAH45299.1| Unknown (protein for MGC:55297) [Danio rerio] |
| Match: gi|24647020|ref|NP_731983.1| |
score: 180.6 |
e-value: 9.9e-45 |
Identity: 53.59% |
Span: 456bp (82.6%) |
Frame: 1 |
| Rpb7 [Drosophila melanogaster] >gi195328827|ref|XP_002031113.1| GM25797 [Drosophila sechellia] >gi|195570746|ref|XP_0... |
| Match: gi|17510349|ref|NP_491093.1| |
score: 174.9 |
e-value: 5.4e-43 |
Identity: 49.67% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|17510349|ref|NP_491093.1| polymerase II (1D600) [Caenorhabditis elegans] gi|7323534|gb|AAF59550.1| Hypothetical pr... |
| Match: gi|31241005|ref|XP_320916.1| |
score: 174.1 |
e-value: 9.3e-43 |
Identity: 52.94% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|31241005|ref|XP_320916.1| ENSANGP00000017695 [Anopheles gambiae] gi|21288656|gb|EAA00949.1| ENSANGP00000017695 [An... |
| Match: gi|12655858|gb|AAK00627.1| |
score: 152.5 |
e-value: 2.9e-36 |
Identity: 52.26% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|12655858|gb|AAK00627.1| RNA polymerase II subunit 7 [Candida albicans] |
| Match: gi|19114885|ref|NP_593972.1| |
score: 149.4 |
e-value: 2.4e-35 |
Identity: 48.05% |
Span: 453bp (82.1%) |
Frame: 1 |
| gi|19114885|ref|NP_593972.1| RNA polymerase II subunit rpb7 [Schizosaccharomyces pombe] gi|3334317|sp|O14459|RPB7_SCH... |
| Match: gi|19114884|ref|NP_593973.1| |
score: 132.9 |
e-value: 2.4e-30 |
Identity: 46.62% |
Span: 390bp (70.7%) |
Frame: 1 |
| gi|19114884|ref|NP_593973.1| DNA-directed RNA polymerase II subunit [Schizosaccharomyces pombe] gi|3395552|emb|CAA201... |
| Match: gi|23508072|ref|NP_700742.1| |
score: 118.2 |
e-value: 6e-26 |
Identity: 39.47% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|23508072|ref|NP_700742.1| DNA-directed RNA polymerase II, putative [Plasmodium falciparum 3D7] gi|23495135|gb|AAN3... |
| Match: gi|6320612|ref|NP_010692.1| |
score: 114.8 |
e-value: 6.7e-25 |
Identity: 37.75% |
Span: 444bp (80.4%) |
Frame: 1 |
| gi|6320612|ref|NP_010692.1| dissociable subunit of RNA polymerase II; Rpb7p [Saccharomyces cerevisiae] gi|464672|sp|P... |
| Match: gi|23481815|gb|EAA17978.1| |
score: 108.2 |
e-value: 6.3e-23 |
Identity: 35.71% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|23481815|gb|EAA17978.1| RNA polymerase II subunit 7 [Plasmodium yoelii yoelii] |
| Match: gi|38101952|gb|EAA48849.1| |
score: 104.4 |
e-value: 9e-22 |
Identity: 34.67% |
Span: 450bp (81.5%) |
Frame: 1 |
| gi|38101952|gb|EAA48849.1| hypothetical protein MG00507.4 [Magnaporthe grisea 70-15] |
| Match: gi|32422833|ref|XP_331860.1| |
score: 94.74 |
e-value: 7.2e-19 |
Identity: 36.18% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|32422833|ref|XP_331860.1| hypothetical protein [Neurospora crassa] gi|28927243|gb|EAA36198.1| hypothetical protein... |
| Match: gi|19074596|ref|NP_586102.1| |
score: 94.36 |
e-value: 9.4e-19 |
Identity: 34.87% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|19074596|ref|NP_586102.1| DNA-DIRECTED RNA POLYMERASE II 19kDa SUBUNIT [Encephalitozoon cuniculi] gi|19069238|emb|... |
| Match: gi|13811986|ref|NP_113115.1| |
score: 75.87 |
e-value: 3.4e-13 |
Identity: 30.46% |
Span: 450bp (81.5%) |
Frame: 1 |
| gi|13811986|ref|NP_113115.1| RNA polymerase II RPB7 subunit-like protein [Guillardia theta] gi|25312592|pir||C90124 R... |
| Match: gi|15233533|ref|NP_193202.1| |
score: 72.79 |
e-value: 2.9e-12 |
Identity: 36.11% |
Span: 324bp (58.7%) |
Frame: 1 |
| gi|15233533|ref|NP_193202.1| RNA polymerase II fifth largest subunit like protein [Arabidopsis thaliana] gi|7447215|p... |
| Match: gi|11994719|dbj|BAB03035.1| |
score: 70.48 |
e-value: 1.4e-11 |
Identity: 34.58% |
Span: 321bp (58.2%) |
Frame: 1 |
| RNA polymerase II fifth largest subunit-like protein [Arabidopsis thaliana] |
| Match: gi|18403570|ref|NP_566719.1| |
score: 70.48 |
e-value: 1.4e-11 |
Identity: 34.58% |
Span: 321bp (58.2%) |
Frame: 1 |
| NRPD7; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21553765|gb|AAM62858.1| RNA polymerase II fifth largest ... |
| Match: gi|11498717|ref|NP_069946.1| |
score: 68.55 |
e-value: 5.5e-11 |
Identity: 26.53% |
Span: 441bp (79.9%) |
Frame: 1 |
| gi|11498717|ref|NP_069946.1| DNA-directed RNA polymerase, subunit E' (rpoE1) [Archaeoglobus fulgidus DSM 4304] gi|744... |
| Match: gi|15668573|ref|NP_247371.1| |
score: 62 |
e-value: 5.1e-09 |
Identity: 30.19% |
Span: 318bp (57.6%) |
Frame: 1 |
| gi|15668573|ref|NP_247371.1| DNA-directed RNA polymerase, subunit E' (rpoE1) [Methanococcus jannaschii] gi|2500642|sp... |
| Match: gi|27374378|gb|AAO01116.1| |
score: 61.23 |
e-value: 8.8e-09 |
Identity: 48.28% |
Span: 171bp (31.0%) |
Frame: 1 |
| gi|27374378|gb|AAO01116.1| CG31155-PA [Drosophila pseudoobscura] |
| Match: gi|21226698|ref|NP_632620.1| |
score: 59.31 |
e-value: 3.3e-08 |
Identity: 25% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|21226698|ref|NP_632620.1| DNA-directed RNA polymerase subunit E' [Methanosarcina mazei Goe1] gi|20904984|gb|AAM302... |
| Match: gi|20092492|ref|NP_618567.1| |
score: 59.31 |
e-value: 3.3e-08 |
Identity: 25.35% |
Span: 426bp (77.2%) |
Frame: 1 |
| gi|20092492|ref|NP_618567.1| DNA-directed RNA polymerase, subunit E [Methanosarcina acetivorans str. C2A] gi|19917756... |
| Match: gi|18314155|ref|NP_560822.1| |
score: 58.54 |
e-value: 5.7e-08 |
Identity: 26.06% |
Span: 423bp (76.6%) |
Frame: 1 |
| gi|18314155|ref|NP_560822.1| DNA-directed RNA polymerase subunit E' (rpoE1) [Pyrobaculum aerophilum] gi|18161744|gb|A... |
| Match: gi|23051810|ref|ZP_00078520.1| |
score: 58.15 |
e-value: 7.4e-08 |
Identity: 24.34% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|23051810|ref|ZP_00078520.1| COG1095: DNA-directed RNA polymerase, subunit E' [Methanosarcina barkeri] |
| Match: gi|20094887|ref|NP_614734.1| |
score: 54.3 |
e-value: 1.1e-06 |
Identity: 24.05% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|20094887|ref|NP_614734.1| DNA-directed RNA polymerase subunit E' [Methanopyrus kandleri AV19] gi|19888120|gb|AAM02... |
| Match: gi|14591652|ref|NP_143736.1| |
score: 53.91 |
e-value: 1.4e-06 |
Identity: 28.45% |
Span: 348bp (63.0%) |
Frame: 1 |
| gi|14591652|ref|NP_143736.1| DNA-directed RNA polymerase subunit E [Pyrococcus horikoshii] gi|7447210|pir||B71205 pro... |
| Match: gi|30682881|ref|NP_193188.2| |
score: 52.37 |
e-value: 4.1e-06 |
Identity: 27.83% |
Span: 315bp (57.1%) |
Frame: 1 |
| DNA-directed RNA polymerase II-related [Arabidopsis thaliana] >gi30682886|ref|NP_849385.1| DNA-directed RNA polymeras... |
| Match: gi|22406866|ref|ZP_00001708.1| |
score: 52.37 |
e-value: 4.1e-06 |
Identity: 25.6% |
Span: 375bp (67.9%) |
Frame: 1 |
| gi|22406866|ref|ZP_00001708.1| COG1095: DNA-directed RNA polymerase, subunit E' [Ferroplasma acidarmanus] |
| Match: gi|15897347|ref|NP_341952.1| |
score: 51.99 |
e-value: 5.3e-06 |
Identity: 25.36% |
Span: 411bp (74.5%) |
Frame: 1 |
| gi|15897347|ref|NP_341952.1| DNA-directed RNA polymerase, subunit E' (rpoE1) [Sulfolobus solfataricus] gi|25312585|pi... |
| Match: gi|14600570|ref|NP_147087.1| |
score: 51.6 |
e-value: 7e-06 |
Identity: 26.89% |
Span: 348bp (63.0%) |
Frame: 1 |
| gi|14600570|ref|NP_147087.1| DNA-directed RNA polymerase subunit E' [Aeropyrum pernix] gi|7447214|pir||A72784 probabl... |
| Match: gi|28828433|gb|AAO51051.1| |
score: 50.06 |
e-value: 2e-05 |
Identity: 28.3% |
Span: 300bp (54.3%) |
Frame: 1 |
| gi|28828433|gb|AAO51051.1| hypothetical protein [Dictyostelium discoideum] |
| Match: gi|19112860|ref|NP_596068.1| |
score: 49.29 |
e-value: 3.4e-05 |
Identity: 23.85% |
Span: 327bp (59.2%) |
Frame: 1 |
| gi|19112860|ref|NP_596068.1| DNA directed RNA polymerase III subunit [Schizosaccharomyces pombe] gi|7490488|pir||T401... |
| Match: gi|38349934|ref|NP_941770.1| |
score: 48.91 |
e-value: 4.5e-05 |
Identity: 24.2% |
Span: 453bp (82.1%) |
Frame: 1 |
| gi|38349934|ref|NP_941770.1| DNA-directed RNA polymerase, subunit E' [Nanoarchaeum equitans Kin4-M] |
| Match: gi|15678292|ref|NP_275407.1| |
score: 48.91 |
e-value: 4.5e-05 |
Identity: 23.13% |
Span: 441bp (79.9%) |
Frame: 1 |
| gi|15678292|ref|NP_275407.1| DNA-dependent RNA polymerase, subunit E' [Methanothermobacter thermautotrophicus] gi|744... |
| Match: gi|7485116|pir||E71407 |
score: 48.52 |
e-value: 5.9e-05 |
Identity: 27.52% |
Span: 297bp (53.8%) |
Frame: 1 |
| gi|7485116|pir||E71407 hypothetical protein - Arabidopsis thaliana gi|2244808|emb|CAB10231.1| hypothetical protein [A... |
| Match: gi|15790905|ref|NP_280729.1| |
score: 45.82 |
e-value: 0.00038 |
Identity: 22.22% |
Span: 456bp (82.6%) |
Frame: 1 |
| gi|15790905|ref|NP_280729.1| DNA-directed RNA polymerase subunit E'; RpoE' [Halobacterium sp. NRC-1] gi|25312587|pir|... |
| Match: gi|34901638|ref|NP_912165.1| |
score: 45.82 |
e-value: 0.00038 |
Identity: 28.12% |
Span: 288bp (52.2%) |
Frame: 1 |
| gi|34901638|ref|NP_912165.1| putative DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide [Oryza sativa (jap... |
| Match: gi|14324700|dbj|BAB59627.1| |
score: 45.82 |
e-value: 0.00038 |
Identity: 27.34% |
Span: 384bp (69.6%) |
Frame: 1 |
| gi|14324700|dbj|BAB59627.1| DNA-directed RNA polymerase E' [Thermoplasma volcanium] |
| Match: gi|13541317|ref|NP_111005.1| |
score: 45.82 |
e-value: 0.00038 |
Identity: 27.34% |
Span: 384bp (69.6%) |
Frame: 1 |
| gi|13541317|ref|NP_111005.1| DNA-directed RNA polymerase subunit E' [Thermoplasma volcanium] |
| Match: gi|15222202|ref|NP_172164.1| |
score: 45.44 |
e-value: 0.0005 |
Identity: 32.18% |
Span: 261bp (47.3%) |
Frame: 1 |
| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] >gi7523702|gb|AAF63141.1|AC011001_11 ... |
| Match: gi|18976628|ref|NP_577985.1| |
score: 45.44 |
e-value: 0.0005 |
Identity: 25.86% |
Span: 348bp (63.0%) |
Frame: 1 |
| gi|18976628|ref|NP_577985.1| DNA-directed RNA polymerase, subunit e' [Pyrococcus furiosus DSM 3638] gi|18892197|gb|AA... |
| Match: gi|17566938|ref|NP_505625.1| |
score: 44.67 |
e-value: 0.00085 |
Identity: 26.12% |
Span: 360bp (65.2%) |
Frame: 1 |
| gi|17566938|ref|NP_505625.1| RNA polymerase (5K686) [Caenorhabditis elegans] gi|7511361|pir||T28049 hypothetical prot... |
| Match: gi|13359203|dbj|BAB33335.1| |
score: 43.13 |
e-value: 0.002 |
Identity: 22.5% |
Span: 450bp (81.5%) |
Frame: 1 |
| gi|13359203|dbj|BAB33335.1| KIAA1665 protein [Homo sapiens] |
| Match: gi|23508254|ref|NP_700923.1| |
score: 42.36 |
e-value: 0.004 |
Identity: 25.93% |
Span: 384bp (69.6%) |
Frame: 1 |
| gi|23508254|ref|NP_700923.1| hypothetical protein, conserved [Plasmodium falciparum 3D7] gi|23495984|gb|AAN35647.1| h... |
| Match: gi|24475814|ref|NP_612211.1| |
score: 41.2 |
e-value: 0.009 |
Identity: 22.29% |
Span: 441bp (79.9%) |
Frame: 1 |
| gi|24475814|ref|NP_612211.1| RNA polymerase III subunit RPC8 [Homo sapiens] gi|29428071|sp|Q9Y535|RPC8_HUMAN DNA-dire... |
| Match: gi|16082590|ref|NP_394548.1| |
score: 40.82 |
e-value: 0.012 |
Identity: 28.12% |
Span: 282bp (51.1%) |
Frame: 1 |
| gi|16082590|ref|NP_394548.1| DNA-directed RNA polymerase subunit E' [Thermoplasma acidophilum] |
| Match: gi|10640403|emb|CAC12217.1| |
score: 40.82 |
e-value: 0.012 |
Identity: 28.12% |
Span: 282bp (51.1%) |
Frame: 1 |
| gi|10640403|emb|CAC12217.1| DNA-directed RNA polymerase, subunit E related protein [Thermoplasma acidophilum] |
| Match: gi|33989527|gb|AAH56557.1| |
score: 38.12 |
e-value: 0.08 |
Identity: 33.7% |
Span: 264bp (47.8%) |
Frame: 1 |
| gi|33989527|gb|AAH56557.1| Unknown (protein for IMAGE:6795293) [Danio rerio] |
|
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At5g59180.1 |
score: 288.9 |
e-value: 1e-78 |
Identity: 91.45% |
Span: 456bp (82.6%) |
Frame: 1 |
| At5g59180.1 68412.m06712 RNA polymerase II |
| Match: At4g14660.1 |
score: 72.79 |
e-value: 1.1e-13 |
Identity: 36.11% |
Span: 324bp (58.7%) |
Frame: 1 |
| At4g14660.1 68411.m02042 RNA polymerase II fifth largest subunit like protein |
| Match: At3g22900.1 |
score: 70.48 |
e-value: 5.7e-13 |
Identity: 34.58% |
Span: 321bp (58.2%) |
Frame: 1 |
| At3g22900.1 68410.m02624 expressed protein similar to DNA-directed RNA polymerase II 19 KD polypeptide (subunit 5) GB... |
| Match: At4g14520.2 |
score: 52.37 |
e-value: 1.6e-07 |
Identity: 27.83% |
Span: 315bp (57.1%) |
Frame: 1 |
| At4g14520.2 68411.m05458 expressed protein |
| Match: At4g14520.1 |
score: 52.37 |
e-value: 1.6e-07 |
Identity: 27.83% |
Span: 315bp (57.1%) |
Frame: 1 |
| At4g14520.1 68411.m05457 expressed protein |
| Match: At1g06790.1 |
score: 45.44 |
e-value: 2e-05 |
Identity: 32.18% |
Span: 261bp (47.3%) |
Frame: 1 |
| At1g06790.1 68408.m00656 RNA polymerase -related similar to DNA directed RNA polymerase III subunit GB:CAA21883 GI:38... |
|
