All Stored BLAST annotations for SGN-U206890
genbank/nr [blastx] Showing best 56 hits recorded
Match: gi|15237095|ref|NP_193777.1| score: 126.7 e-value: 8.3e-29 Identity: 88.57% Span: 204bp (98.1%) Frame: 3
smB (small nuclear ribonucleoprotein associated protein B) [Arabidopsis thaliana] >gi30685110|ref|NP_849414.1| smB (s...
Match: gi|21536707|gb|AAM61039.1| score: 125.6 e-value: 1.9e-28 Identity: 87.32% Span: 204bp (98.1%) Frame: 3
putative snRNP protein [Arabidopsis thaliana]
Match: gi|15241519|ref|NP_199263.1| score: 125.6 e-value: 1.9e-28 Identity: 87.32% Span: 204bp (98.1%) Frame: 3
small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative [Arabidop...
Match: gi|33146808|dbj|BAC79756.1| score: 118.2 e-value: 3e-26 Identity: 83.82% Span: 198bp (95.2%) Frame: 3
gi|33146808|dbj|BAC79756.1| putative snRNP(small nuclear ribonucleoprotein associated protein) [Oryza sativa (japonic...
Match: gi|34900024|ref|NP_911358.1| score: 118.2 e-value: 3e-26 Identity: 83.82% Span: 198bp (95.2%) Frame: 3
gi|34900024|ref|NP_911358.1| putative snRNP protein [Oryza sativa (japonica cultivar-group)]
Match: gi|10720263|sp|Q9PV94|RSMB_CHICK score: 93.59 e-value: 7.8e-19 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|10720263|sp|Q9PV94|RSMB_CHICK Small nuclear ribonucleoprotein associated protein B' (snRNP-B') (Sm protein B') (Sm...
Match: gi|3142634|gb|AAC78612.1| score: 93.59 e-value: 7.8e-19 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|3142634|gb|AAC78612.1| small nuclear ribonucleoprotein N [Mus musculus]
Match: gi|6730226|pdb|1D3B|B score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|6730226|pdb|1D3B|B Chain B, Crystal Structure Of The D3b Subcomplex Of The Human Core Snrnp Domain At 2.0a Resolut...
Match: gi|5870129|gb|AAD54488.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|5870129|gb|AAD54488.1| small nuclear ribonucleoprotein B [Homo sapiens]
Match: gi|8099650|gb|AAF72188.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|8099650|gb|AAF72188.1| snRNP-associated protein; SmB [Danio rerio]
Match: gi|112305|pir||A35448 score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|112305|pir||A35448 small nuclear ribonucleoprotein-associated protein N - rat gi|206694|gb|AAA42059.1| snRNP-assoc...
Match: gi|7208221|gb|AAF40115.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|7208221|gb|AAF40115.1| small nuclear ribonucleoprotein B' [Macropus eugenii]
Match: gi|12643865|sp|Q9TU67|RSMB_ERIEU score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|12643865|sp|Q9TU67|RSMB_ERIEU Small nuclear ribonucleoprotein associated protein B' (snRNP-B') (Sm protein B') (Sm...
Match: gi|38150007|ref|NP_937859.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|38150007|ref|NP_937859.1| small nuclear ribonucleoprotein polypeptide B/B' isoform B'; Sm protein B/B'; small nucl...
Match: gi|4507135|ref|NP_003088.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|4507135|ref|NP_003088.1| small nuclear ribonucleoprotein polypeptide N; SM protein N; tissue-specific splicing pro...
Match: gi|5870130|gb|AAD54489.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|5870130|gb|AAD54489.1| small nuclear ribonucleoprotein B' [Homo sapiens]
Match: gi|190247|gb|AAA60151.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|190247|gb|AAA60151.1| snRNP polypeptide B
Match: gi|34858687|ref|XP_342517.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|34858687|ref|XP_342517.1| similar to small nuclear ribonucleoprotein B [Rattus norvegicus]
Match: gi|6678053|ref|NP_033251.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|6678053|ref|NP_033251.1| small nuclear ribonucleoprotein B [Mus musculus] gi|134038|sp|P27048|RSMB_MOUSE Small nuc...
Match: gi|4507125|ref|NP_003082.1| score: 93.2 e-value: 1e-18 Identity: 61.76% Span: 204bp (98.1%) Frame: 3
gi|4507125|ref|NP_003082.1| small nuclear ribonucleoprotein polypeptide B/B' isoform B; Sm protein B/B'; small nuclea...
Match: gi|27371057|gb|AAH41275.1| score: 91.66 e-value: 3e-18 Identity: 60.29% Span: 204bp (98.1%) Frame: 3
gi|27371057|gb|AAH41275.1| Snrpn-prov protein [Xenopus laevis]
Match: gi|27687269|ref|XP_212806.1| score: 90.89 e-value: 5.1e-18 Identity: 60.29% Span: 204bp (98.1%) Frame: 3
gi|27687269|ref|XP_212806.1| similar to small nuclear ribonucleoprotein-associated protein N - rat [Rattus norvegicus]
Match: gi|31213159|ref|XP_315523.1| score: 90.12 e-value: 8.6e-18 Identity: 55.88% Span: 204bp (98.1%) Frame: 3
gi|31213159|ref|XP_315523.1| ENSANGP00000007148 [Anopheles gambiae] gi|21299318|gb|EAA11463.1| ENSANGP00000007148 [An...
Match: gi|10720265|sp|Q9TU66|RSMB_MONDO score: 89.74 e-value: 1.1e-17 Identity: 60.29% Span: 204bp (98.1%) Frame: 3
gi|10720265|sp|Q9TU66|RSMB_MONDO Small nuclear ribonucleoprotein associated protein B' (snRNP-B') (Sm protein B') (Sm...
Match: gi|17136806|ref|NP_476921.1| score: 88.58 e-value: 2.5e-17 Identity: 54.41% Span: 204bp (98.1%) Frame: 3
gi|17136806|ref|NP_476921.1| Small ribonucleoprotein particle protein B CG5352-PA [Drosophila melanogaster] gi|107202...
Match: gi|38048415|gb|AAR10110.1| score: 88.58 e-value: 2.5e-17 Identity: 54.41% Span: 204bp (98.1%) Frame: 3
gi|38048415|gb|AAR10110.1| similar to Drosophila melanogaster SmB [Drosophila yakuba]
Match: gi|337459|gb|AAA36578.1| score: 87.81 e-value: 4.3e-17 Identity: 61.9% Span: 189bp (90.9%) Frame: 3
gi|337459|gb|AAA36578.1| small nuclear ribonucleoprotein particle (SmB)
Match: gi|337461|gb|AAA36579.1| score: 87.81 e-value: 4.3e-17 Identity: 61.9% Span: 189bp (90.9%) Frame: 3
gi|337461|gb|AAA36579.1| small nuclear ribonucleoprotein particle (SmB')
Match: gi|28828464|gb|AAL92641.2| score: 86.27 e-value: 1.2e-16 Identity: 62.9% Span: 186bp (89.4%) Frame: 3
gi|28828464|gb|AAL92641.2| similar to Arabidopsis thaliana (Mouse-ear cress). Similarity to small nuclear ribonucleop...
Match: gi|17509627|ref|NP_493348.1| score: 85.11 e-value: 2.8e-16 Identity: 51.47% Span: 204bp (98.1%) Frame: 3
gi|17509627|ref|NP_493348.1| small nuclear ribonucleoprotein, small nuclear ribonucleoprotein SNR-2 (16.7 kD) (snr-2)...
Match: gi|34869034|ref|XP_345547.1| score: 83.57 e-value: 8.1e-16 Identity: 57.35% Span: 204bp (98.1%) Frame: 3
gi|34869034|ref|XP_345547.1| similar to Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B)...
Match: gi|38076462|ref|XP_147856.2| score: 80.88 e-value: 5.2e-15 Identity: 56.92% Span: 195bp (93.8%) Frame: 3
gi|38076462|ref|XP_147856.2| similar to Small nuclear ribonucleoprotein associated protein N (snRNP-N) (Sm protein N)...
Match: gi|38107284|gb|EAA53477.1| score: 80.49 e-value: 6.8e-15 Identity: 55.13% Span: 198bp (95.2%) Frame: 3
gi|38107284|gb|EAA53477.1| hypothetical protein MG07754.4 [Magnaporthe grisea 70-15]
Match: gi|32422527|ref|XP_331707.1| score: 78.57 e-value: 2.6e-14 Identity: 52.56% Span: 198bp (95.2%) Frame: 3
gi|32422527|ref|XP_331707.1| hypothetical protein [Neurospora crassa] gi|28927451|gb|EAA36403.1| hypothetical protein...
Match: gi|13160046|emb|CAC32828.1| score: 77.8 e-value: 4.4e-14 Identity: 64.81% Span: 162bp (77.9%) Frame: 3
gi|13160046|emb|CAC32828.1| dJ734P14.2.3 (small nuclear ribonucleoprotein polypeptide B (isoform 3)) [Homo sapiens]
Match: gi|7208223|gb|AAF40116.1| score: 77.03 e-value: 7.6e-14 Identity: 64.81% Span: 162bp (77.9%) Frame: 3
gi|7208223|gb|AAF40116.1| truncated small nuclear ribonucleoprotein B' [Macropus eugenii]
Match: gi|5870115|gb|AAD54483.1| score: 73.94 e-value: 6.4e-13 Identity: 62.96% Span: 162bp (77.9%) Frame: 3
gi|5870115|gb|AAD54483.1| truncated small nuclear ribonucleoprotein B' [Monodelphis domestica]
Match: gi|38090876|ref|XP_356505.1| score: 71.63 e-value: 3.2e-12 Identity: 53.33% Span: 180bp (86.5%) Frame: 3
gi|38090876|ref|XP_356505.1| similar to Small nuclear ribonucleoprotein associated protein N (snRNP-N) (Sm protein N)...
Match: gi|134545|sp|P17136|RSMB_RAT score: 68.55 e-value: 2.7e-11 Identity: 56.86% Span: 153bp (73.6%) Frame: 3
gi|134545|sp|P17136|RSMB_RAT Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (Sm...
Match: gi|23509367|ref|NP_702034.1| score: 68.17 e-value: 3.5e-11 Identity: 47.06% Span: 204bp (98.1%) Frame: 3
gi|23509367|ref|NP_702034.1| ribonucleoprotein, putative [Plasmodium falciparum 3D7] gi|23497211|gb|AAN36758.1| ribon...
Match: gi|36495|emb|CAA34288.1| score: 67.4 e-value: 6e-11 Identity: 60.42% Span: 144bp (69.2%) Frame: 3
gi|36495|emb|CAA34288.1| SmB /B' autoimmune antigene [Homo sapiens]
Match: gi|6320867|ref|NP_010946.1| score: 63.16 e-value: 1.1e-09 Identity: 44.3% Span: 201bp (96.6%) Frame: 3
gi|6320867|ref|NP_010946.1| associated with U1, U2, U4, and U5 snRNPs as part of the Sm-core that is common to all sp...
Match: gi|19115063|ref|NP_594151.1| score: 60.08 e-value: 9.6e-09 Identity: 42.42% Span: 195bp (93.8%) Frame: 3
gi|19115063|ref|NP_594151.1| small nuclear ribonucleoprotein associated protein b [Schizosaccharomyces pombe] gi|1723...
Match: gi|34875499|ref|XP_224436.2| score: 55.45 e-value: 2.4e-07 Identity: 51.06% Span: 141bp (67.8%) Frame: 3
gi|34875499|ref|XP_224436.2| similar to Small nuclear ribonucleoprotein associated protein N (snRNP-N) (Sm protein N)...
Match: gi|90142|pir||S10580 score: 54.68 e-value: 4e-07 Identity: 65% Span: 120bp (57.7%) Frame: 3
gi|90142|pir||S10580 snRNP protein B/B' - rabbit (fragment)
Match: gi|33944811|ref|XP_340553.1| score: 47.75 e-value: 4.9e-05 Identity: 44.44% Span: 186bp (89.4%) Frame: 3
gi|33944811|ref|XP_340553.1| small nuclear ribonucleoprotein protein, putative [Trypanosoma brucei] gi|33348587|gb|AA...
Match: gi|24655606|ref|NP_647660.1| score: 39.66 e-value: 0.013 Identity: 33.96% Span: 159bp (76.4%) Frame: 3
gi|24655606|ref|NP_647660.1| CG2021-PA [Drosophila melanogaster] gi|7292155|gb|AAF47567.1| CG2021-PA [Drosophila mela...
Match: gi|21707073|gb|AAH33861.1| score: 39.66 e-value: 0.013 Identity: 36.73% Span: 147bp (70.7%) Frame: 3
gi|21707073|gb|AAH33861.1| MGC14151 protein [Homo sapiens]
Match: gi|12858676|dbj|BAB31406.1| score: 39.66 e-value: 0.013 Identity: 36.73% Span: 147bp (70.7%) Frame: 3
gi|12858676|dbj|BAB31406.1| unnamed protein product [Mus musculus] gi|38328385|gb|AAH62267.1| Unknown (protein for MG...
Match: gi|27672880|ref|XP_213347.1| score: 39.66 e-value: 0.013 Identity: 36.73% Span: 147bp (70.7%) Frame: 3
gi|27672880|ref|XP_213347.1| similar to hypothetical protein MGC14151 [Rattus norvegicus]
Match: gi|14150161|ref|NP_115732.1| score: 39.66 e-value: 0.013 Identity: 36.73% Span: 147bp (70.7%) Frame: 3
gi|14150161|ref|NP_115732.1| hypothetical protein MGC14151 [Homo sapiens] gi|13623585|gb|AAH06407.1| Hypothetical pro...
Match: gi|22328770|ref|NP_680719.1| score: 38.89 e-value: 0.023 Identity: 31.25% Span: 192bp (92.3%) Frame: 3
small nuclear ribonucleoprotein-related / snRNP-related [Arabidopsis thaliana]
Match: gi|17544592|ref|NP_502034.1| score: 38.51 e-value: 0.03 Identity: 30.65% Span: 186bp (89.4%) Frame: 3
gi|17544592|ref|NP_502034.1| u6 snRNA-associated Sm-like protein (lsm-6) [Caenorhabditis elegans] gi|7511226|pir||T27...
Match: gi|15218164|ref|NP_173542.1| score: 38.12 e-value: 0.039 Identity: 45.71% Span: 105bp (50.5%) Frame: 3
small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative [Arabidopsis thaliana] >gi8920641|...
Match: gi|15223768|ref|NP_177812.1| score: 37.74 e-value: 0.051 Identity: 42.86% Span: 105bp (50.5%) Frame: 3
small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative [Arabidopsis thaliana] >gi12322228...
Match: gi|15897150|ref|NP_341755.1| score: 36.96 e-value: 0.087 Identity: 47.37% Span: 114bp (54.8%) Frame: 3
gi|15897150|ref|NP_341755.1| Small nuclear riboprotein protein (snRNP-1) [Sulfolobus solfataricus] gi|25394288|pir||B...

arabidopsis/peptide [blastx] Showing best 12 hits recorded
Match: At4g20440.2 score: 126.7 e-value: 2.1e-30 Identity: 88.57% Span: 204bp (98.1%) Frame: 3
At4g20440.2 68411.m05272 small nuclear ribonucleoprotein, putative (snRNP) similar to small nuclear ribonucleoprotein...
Match: At4g20440.1 score: 126.7 e-value: 2.1e-30 Identity: 88.57% Span: 204bp (98.1%) Frame: 3
At4g20440.1 68411.m05271 small nuclear ribonucleoprotein, putative (snRNP) similar to small nuclear ribonucleoprotein...
Match: At5g44500.1 score: 125.6 e-value: 4.6e-30 Identity: 87.32% Span: 204bp (98.1%) Frame: 3
At5g44500.1 68412.m04915 small nuclear ribonucleoprotein, putative (snRNP) similar to small nuclear ribonucleoprotein...
Match: At4g18372.1 score: 38.89 e-value: 0.00057 Identity: 31.25% Span: 192bp (92.3%) Frame: 3
At4g18372.1 68411.m02486 expressed protein
Match: At1g21190.1 score: 38.12 e-value: 0.001 Identity: 45.71% Span: 105bp (50.5%) Frame: 3
At1g21190.1 68408.m02395 expressed protein
Match: At1g76860.1 score: 37.74 e-value: 0.001 Identity: 42.86% Span: 105bp (50.5%) Frame: 3
At1g76860.1 68408.m08211 Sm-related protein contains Pfam profile: PF01423: Sm protein
Match: At3g14080.2 score: 33.88 e-value: 0.018 Identity: 35.71% Span: 123bp (59.1%) Frame: 3
At3g14080.2 68410.m06789 Sm protein -related similar to GB:AAB62189 from [Homo sapiens], contains Pfam profile: PF014...
Match: At3g14080.1 score: 33.88 e-value: 0.018 Identity: 35.71% Span: 123bp (59.1%) Frame: 3
At3g14080.1 68410.m06788 Sm protein -related similar to GB:AAB62189 from [Homo sapiens], contains Pfam profile: PF014...
Match: At3g62840.1 score: 33.5 e-value: 0.024 Identity: 35.42% Span: 138bp (66.3%) Frame: 3
At3g62840.1 68410.m06523 small nuclear ribonucleo protein-related protein small nuclear ribonucleoprotein chain D2 - ...
Match: At2g47640.2 score: 33.5 e-value: 0.024 Identity: 35.42% Span: 138bp (66.3%) Frame: 3
At2g47640.2 68409.m05576 small nuclear ribonucleo protein D2 -related
Match: At2g47640.1 score: 33.5 e-value: 0.024 Identity: 35.42% Span: 138bp (66.3%) Frame: 3
At2g47640.1 68409.m05575 small nuclear ribonucleo protein D2 -related
Match: At1g19120.1 score: 31.96 e-value: 0.07 Identity: 30.95% Span: 126bp (60.6%) Frame: 3
At1g19120.1 68408.m02146 expressed protein