| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|7673355|gb|AAF66823.1| |
score: 246.1 |
e-value: 4.8e-64 |
Identity: 95.49% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|7673357|gb|AAF66824.1| |
score: 246.1 |
e-value: 4.8e-64 |
Identity: 95.49% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|7673357|gb|AAF66824.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|7528270|gb|AAF63202.1| |
score: 211.5 |
e-value: 1.3e-53 |
Identity: 81.06% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|7528270|gb|AAF63202.1| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|7673359|gb|AAF66825.1| |
score: 196.8 |
e-value: 3.4e-49 |
Identity: 77.86% |
Span: 393bp (46.6%) |
Frame: 1 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|13560783|gb|AAK30205.1| |
score: 187.2 |
e-value: 2.7e-46 |
Identity: 75% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota] |
| Match: gi|7439967|pir||T06979 |
score: 186.8 |
e-value: 3.5e-46 |
Identity: 73.68% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|7439967|pir||T06979 polyadenylate-binding protein - wheat gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triti... |
| Match: gi|7484631|pir||T12420 |
score: 184.5 |
e-value: 1.7e-45 |
Identity: 71.01% |
Span: 390bp (46.3%) |
Frame: 1 |
| gi|7484631|pir||T12420 polyadenylate-binding protein - common ice plant (fragment) gi|2213871|gb|AAB61594.1| poly(A)-... |
| Match: gi|34015127|gb|AAQ56324.1| |
score: 177.2 |
e-value: 2.8e-43 |
Identity: 69.17% |
Span: 396bp (47.0%) |
Frame: 1 |
| putative poly(A)-binding protein [Oryza sativa Japonica Group] |
| Match: gi|35215045|dbj|BAC92404.1| |
score: 177.2 |
e-value: 2.8e-43 |
Identity: 69.17% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|35215045|dbj|BAC92404.1| putative poly(A)-binding protein [Oryza sativa (japonica cultivar-group)] gi|35215184|dbj... |
| Match: gi|32490269|emb|CAE05558.1| |
score: 174.9 |
e-value: 1.4e-42 |
Identity: 70.37% |
Span: 396bp (47.0%) |
Frame: 1 |
| gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (japonica cultivar-group)] gi|38345164|emb|CAE02946.2| OSJ... |
| Match: gi|18402769|ref|NP_564554.1| |
score: 172.2 |
e-value: 8.9e-42 |
Identity: 71.32% |
Span: 375bp (44.5%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|15227815|ref|NP_179916.1| |
score: 151.8 |
e-value: 1.2e-35 |
Identity: 61.15% |
Span: 390bp (46.3%) |
Frame: 1 |
| gi|15227815|ref|NP_179916.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|7439964|pir||T0... |
| Match: gi|13430610|gb|AAK25927.1| |
score: 151.8 |
e-value: 1.2e-35 |
Identity: 61.15% |
Span: 390bp (46.3%) |
Frame: 1 |
| gi|13430610|gb|AAK25927.1| putative poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|19347816|gb|AAL86321.1| |
score: 143.7 |
e-value: 3.4e-33 |
Identity: 66.67% |
Span: 351bp (41.6%) |
Frame: 1 |
| putative poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|30689921|ref|NP_195137.2| |
score: 143.7 |
e-value: 3.4e-33 |
Identity: 66.67% |
Span: 351bp (41.6%) |
Frame: 1 |
| gi|30689921|ref|NP_195137.2| polyadenylate-binding protein 2 (PABP2) [Arabidopsis thaliana] |
| Match: gi|1171978|sp|P42731|PAB2_ARATH |
score: 143.7 |
e-value: 3.4e-33 |
Identity: 66.67% |
Span: 351bp (41.6%) |
Frame: 1 |
| gi|1171978|sp|P42731|PAB2_ARATH Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) gi|7439968|pir||... |
| Match: gi|14029147|gb|AAK51123.1| |
score: 129.8 |
e-value: 5e-29 |
Identity: 59.56% |
Span: 393bp (46.6%) |
Frame: 1 |
| gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis] |
| Match: gi|480602|pir||S37085 |
score: 118.6 |
e-value: 1.2e-25 |
Identity: 69.07% |
Span: 285bp (33.8%) |
Frame: 1 |
| gi|480602|pir||S37085 polyadenylate-binding protein - fern (Anemia phyllitidis) gi|398327|emb|CAA81127.1| poly(A)-mRN... |
| Match: gi|15217573|ref|NP_177322.1| |
score: 109 |
e-value: 9.2e-23 |
Identity: 67.44% |
Span: 258bp (30.6%) |
Frame: 1 |
| gi|15217573|ref|NP_177322.1| polyadenylate-binding protein 5 (PABP5) [Arabidopsis thaliana] gi|21542448|sp|Q05196|PAB... |
| Match: gi|166786|gb|AAA32832.1| |
score: 107.1 |
e-value: 3.5e-22 |
Identity: 66.28% |
Span: 258bp (30.6%) |
Frame: 1 |
| gi|166786|gb|AAA32832.1| poly(A)-binding protein |
| Match: gi|7439965|pir||T00768 |
score: 106.3 |
e-value: 6e-22 |
Identity: 49.59% |
Span: 363bp (43.1%) |
Frame: 1 |
| gi|7439965|pir||T00768 polyadenylate-binding protein T22J18.7 - Arabidopsis thaliana gi|3287682|gb|AAC25510.1| Strong... |
| Match: gi|23197794|gb|AAN15424.1| |
score: 106.3 |
e-value: 6e-22 |
Identity: 49.59% |
Span: 363bp (43.1%) |
Frame: 1 |
| gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis thaliana] |
| Match: gi|9930616|gb|AAG02117.1| |
score: 106.3 |
e-value: 6e-22 |
Identity: 49.59% |
Span: 363bp (43.1%) |
Frame: 1 |
| gi|9930616|gb|AAG02117.1| poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|15219945|ref|NP_173690.1| |
score: 106.3 |
e-value: 6e-22 |
Identity: 49.59% |
Span: 363bp (43.1%) |
Frame: 1 |
| gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PABP3) [Arabidopsis thaliana] gi|12643628|sp|O64380|PAB... |
| Match: gi|585638|sp|P21187|PABP_DROME |
score: 87.04 |
e-value: 3.7e-16 |
Identity: 41.46% |
Span: 321bp (38.1%) |
Frame: 1 |
| gi|585638|sp|P21187|PABP_DROME Polyadenylate-binding protein (Poly(A)-binding protein) (PABP) gi|495594|gb|AAA70421.1... |
| Match: gi|17136378|ref|NP_476667.1| |
score: 87.04 |
e-value: 3.7e-16 |
Identity: 41.46% |
Span: 321bp (38.1%) |
Frame: 1 |
| gi|17136378|ref|NP_476667.1| polyA-binding protein CG5119-PA [Drosophila melanogaster] gi|24654793|ref|NP_725749.1| p... |
| Match: gi|33357135|pdb|1JGN|A |
score: 86.27 |
e-value: 6.4e-16 |
Identity: 55.26% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|33357135|pdb|1JGN|A Chain A, Solution Structure Of The C-Terminal Pabc Domain Of Human Poly(A)-Binding Protein In ... |
| Match: gi|19705459|ref|NP_599180.1| |
score: 86.27 |
e-value: 6.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|19705459|ref|NP_599180.1| poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] gi|12188891|emb|CAC21554.1| p... |
| Match: gi|129535|sp|P29341|PAB1_MOUSE |
score: 86.27 |
e-value: 6.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|129535|sp|P29341|PAB1_MOUSE Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) gi|2119041|pir||I... |
| Match: gi|31560656|ref|NP_032800.2| |
score: 86.27 |
e-value: 6.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|31560656|ref|NP_032800.2| poly A binding protein, cytoplasmic 1; poly A binding protein 1 [Mus musculus] gi|132780... |
| Match: gi|26354649|dbj|BAC40951.1| |
score: 86.27 |
e-value: 6.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus] |
| Match: gi|4505575|ref|NP_002559.1| |
score: 85.89 |
e-value: 8.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|4505575|ref|NP_002559.1| poly(A) binding protein, cytoplasmic 1 [Homo sapiens] gi|538581|pir||DNHUPA polyadenylate... |
| Match: gi|13787100|pdb|1G9L|A |
score: 85.89 |
e-value: 8.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|13787100|pdb|1G9L|A Chain A, Solution Structure Of The Pabc Domain Of Human Poly(A) Binding Protein |
| Match: gi|28189671|dbj|BAC56450.1| |
score: 85.89 |
e-value: 8.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|28189671|dbj|BAC56450.1| similar to poly(A)-binding protein 1 [Bos taurus] |
| Match: gi|12229876|sp|Q15097|PAB2_HUMAN |
score: 85.89 |
e-value: 8.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|12229876|sp|Q15097|PAB2_HUMAN Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) gi|1082703|pir|... |
| Match: gi|41386798|ref|NP_776993.1| |
score: 85.89 |
e-value: 8.4e-16 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|41386798|ref|NP_776993.1| poly(A) binding protein, cytoplasmic 1 [Bos taurus] gi|3183544|sp|P11940|PAB1_HUMAN Poly... |
| Match: gi|41053728|ref|NP_957176.1| |
score: 85.5 |
e-value: 1.1e-15 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 [Danio rerio] gi|37590406|gb|AAH59662.1| Poly A bi... |
| Match: gi|30353795|gb|AAH52100.1| |
score: 84.73 |
e-value: 1.9e-15 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|30353795|gb|AAH52100.1| Pabpc1-prov protein [Xenopus laevis] |
| Match: gi|64970|emb|CAA40721.1| |
score: 84.73 |
e-value: 1.9e-15 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis] |
| Match: gi|13435438|gb|AAH04587.1| |
score: 84.73 |
e-value: 1.9e-15 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus] |
| Match: gi|2665654|gb|AAB88449.1| |
score: 84.34 |
e-value: 2.4e-15 |
Identity: 53.01% |
Span: 249bp (29.5%) |
Frame: 1 |
| gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus] |
| Match: gi|1352709|sp|P20965|PAB1_XENLA |
score: 83.96 |
e-value: 3.2e-15 |
Identity: 57.97% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|1352709|sp|P20965|PAB1_XENLA Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) gi|538582|pir||D... |
| Match: gi|34935343|ref|XP_213072.2| |
score: 83.96 |
e-value: 3.2e-15 |
Identity: 51.19% |
Span: 252bp (29.9%) |
Frame: 1 |
| gi|34935343|ref|XP_213072.2| similar to poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] |
| Match: gi|13540314|gb|AAK29408.1| |
score: 82.42 |
e-value: 9.2e-15 |
Identity: 49.43% |
Span: 261bp (31.0%) |
Frame: 1 |
| gi|13540314|gb|AAK29408.1| embryonic poly(A) binding protein [Xenopus laevis] |
| Match: gi|7439963|pir||T07933 |
score: 82.42 |
e-value: 9.2e-15 |
Identity: 60.87% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|7439963|pir||T07933 polyadenylate-binding protein RB47 precursor, chloroplast - Chlamydomonas reinhardtii gi|29353... |
| Match: gi|41152034|ref|NP_958453.1| |
score: 82.42 |
e-value: 9.2e-15 |
Identity: 51.85% |
Span: 243bp (28.8%) |
Frame: 1 |
| gi|41152034|ref|NP_958453.1| poly(A) binding protein, cytoplasmic 4 (inducible form); sb:cb12 [Danio rerio] gi|314192... |
| Match: gi|31201221|ref|XP_309558.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 39.2% |
Span: 327bp (38.8%) |
Frame: 1 |
| gi|31201221|ref|XP_309558.1| ENSANGP00000022280 [Anopheles gambiae] gi|21293041|gb|EAA05186.1| ENSANGP00000022280 [An... |
| Match: gi|38076424|ref|XP_354834.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|38076424|ref|XP_354834.1| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|4504715|ref|NP_003810.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|4504715|ref|NP_003810.1| poly A binding protein, cytoplasmic 4; inducible poly(A)-binding protein; poly(A)-binding... |
| Match: gi|28201852|sp|Q9H361|PAB3_HUMAN |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|28201852|sp|Q9H361|PAB3_HUMAN Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (PABP 3) (Testis-specifi... |
| Match: gi|13569958|ref|NP_112241.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|13569958|ref|NP_112241.1| poly(A) binding protein, cytoplasmic 3; poly(A)-binding protein-like 3; poly(A)-binding ... |
| Match: gi|41388837|gb|AAH65540.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens] |
| Match: gi|12053297|emb|CAB66834.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|12053297|emb|CAB66834.1| hypothetical protein [Homo sapiens] |
| Match: gi|22507391|ref|NP_683717.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|22507391|ref|NP_683717.1| poly(A) binding protein, cytoplasmic 4 isoform 2 [Mus musculus] gi|16307591|gb|AAH10345.... |
| Match: gi|34419622|ref|NP_570951.2| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|34419622|ref|NP_570951.2| poly(A) binding protein, cytoplasmic 4 isoform 1 [Mus musculus] gi|33991671|gb|AAH56432.... |
| Match: gi|13096978|gb|AAH03283.1| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|34870953|ref|XP_216517.2| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|34870953|ref|XP_216517.2| similar to poly(A)-binding protein, cytoplasmic 4-like [Rattus norvegicus] |
| Match: gi|34870050|ref|XP_213689.2| |
score: 82.03 |
e-value: 1.2e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|34870050|ref|XP_213689.2| similar to poly(A)-binding protein, cytoplasmic 4-like [Rattus norvegicus] |
| Match: gi|37681851|gb|AAQ97803.1| |
score: 81.65 |
e-value: 1.6e-14 |
Identity: 59.42% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio] |
| Match: gi|41054151|ref|NP_956133.1| |
score: 81.65 |
e-value: 1.6e-14 |
Identity: 59.42% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|41054151|ref|NP_956133.1| poly(A) binding protein, cytoplasmic 1 [Danio rerio] gi|27881953|gb|AAH44513.1| Poly(A) ... |
| Match: gi|32398879|emb|CAD98589.1| |
score: 81.26 |
e-value: 2.1e-14 |
Identity: 48.94% |
Span: 282bp (33.5%) |
Frame: 1 |
| gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium parvum] |
| Match: gi|34878520|ref|XP_224849.2| |
score: 80.49 |
e-value: 3.5e-14 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|34878520|ref|XP_224849.2| similar to poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] |
| Match: gi|38091384|ref|XP_354609.1| |
score: 79.34 |
e-value: 7.8e-14 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|38091384|ref|XP_354609.1| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|19526272|gb|AAL89666.1| |
score: 78.57 |
e-value: 1.3e-13 |
Identity: 50% |
Span: 246bp (29.2%) |
Frame: 1 |
| gi|19526272|gb|AAL89666.1| polyA-binding protein [Takifugu rubripes] |
| Match: gi|38091389|ref|XP_354610.1| |
score: 78.18 |
e-value: 1.7e-13 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|38091389|ref|XP_354610.1| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|38091386|ref|XP_122209.4| |
score: 78.18 |
e-value: 1.7e-13 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|38091386|ref|XP_122209.4| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|15230352|ref|NP_188566.1| |
score: 77.8 |
e-value: 2.3e-13 |
Identity: 56.92% |
Span: 195bp (23.1%) |
Frame: 1 |
| gi|15230352|ref|NP_188566.1| hypothetical protein [Arabidopsis thaliana] gi|11994457|dbj|BAB02459.1| poly(A)-binding ... |
| Match: gi|34534986|dbj|BAC87174.1| |
score: 77.8 |
e-value: 2.3e-13 |
Identity: 50.65% |
Span: 231bp (27.4%) |
Frame: 1 |
| gi|34534986|dbj|BAC87174.1| unnamed protein product [Homo sapiens] |
| Match: gi|27883566|gb|AAO25762.1| |
score: 77.03 |
e-value: 3.9e-13 |
Identity: 56.25% |
Span: 192bp (22.8%) |
Frame: 1 |
| gi|27883566|gb|AAO25762.1| polyadenylate-binding protein [Ictalurus punctatus] |
| Match: gi|23508928|ref|NP_701596.1| |
score: 76.26 |
e-value: 6.6e-13 |
Identity: 55.07% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|23508928|ref|NP_701596.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7] gi|23496765|gb|AAN36... |
| Match: gi|41151222|ref|XP_114158.3| |
score: 76.26 |
e-value: 6.6e-13 |
Identity: 45% |
Span: 291bp (34.5%) |
Frame: 1 |
| gi|41151222|ref|XP_114158.3| similar to Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) [Homo sa... |
| Match: gi|459650|gb|AAC46487.1| |
score: 75.48 |
e-value: 1.1e-12 |
Identity: 53.62% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|459650|gb|AAC46487.1| poly(A) binding protein gi|515321|gb|AAC46489.1| poly(A) binding protein gi|2854066|gb|AAC02... |
| Match: gi|34809632|pdb|1NMR|A |
score: 75.48 |
e-value: 1.1e-12 |
Identity: 53.62% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|34809632|pdb|1NMR|A Chain A, Solution Structure Of C-Terminal Domain From Trypanosoma Cruzi Poly(A)-Binding Protein |
| Match: gi|38078078|ref|XP_124207.2| |
score: 75.1 |
e-value: 1.5e-12 |
Identity: 53.62% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|38078078|ref|XP_124207.2| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|41201785|ref|XP_372466.1| |
score: 74.33 |
e-value: 2.5e-12 |
Identity: 52.94% |
Span: 204bp (24.2%) |
Frame: 1 |
| gi|41201785|ref|XP_372466.1| similar to poly(A) binding protein, cytoplasmic 4 isoform 2 [Homo sapiens] |
| Match: gi|23481012|gb|EAA17420.1| |
score: 74.33 |
e-value: 2.5e-12 |
Identity: 48.24% |
Span: 255bp (30.2%) |
Frame: 1 |
| gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii] |
| Match: gi|21312912|ref|NP_080502.1| |
score: 73.94 |
e-value: 3.3e-12 |
Identity: 53.62% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|21312912|ref|NP_080502.1| RIKEN cDNA 4932702K14 [Mus musculus] gi|12855391|dbj|BAB30319.1| unnamed protein product... |
| Match: gi|38076553|ref|XP_143255.3| |
score: 73.94 |
e-value: 3.3e-12 |
Identity: 56.52% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|38076553|ref|XP_143255.3| similar to poly(A) binding protein [Mus musculus] |
| Match: gi|7671656|emb|CAB89423.1| |
score: 73.94 |
e-value: 3.3e-12 |
Identity: 53.62% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|7671656|emb|CAB89423.1| dJ1069P2.3.1 (novel PABPC1 (poly(A)-binding protein, cytoplasmic 1) (PABPL1) like protein ... |
| Match: gi|27682273|ref|XP_225992.1| |
score: 73.56 |
e-value: 4.3e-12 |
Identity: 45.78% |
Span: 249bp (29.5%) |
Frame: 1 |
| gi|27682273|ref|XP_225992.1| similar to polyA binding protein, testis-enriched isoform [Rattus norvegicus] |
| Match: gi|15228016|ref|NP_181204.1| |
score: 73.17 |
e-value: 5.6e-12 |
Identity: 52.7% |
Span: 210bp (24.9%) |
Frame: 1 |
| gi|15228016|ref|NP_181204.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|12229883|sp|Q9Z... |
| Match: gi|41201723|ref|XP_292012.4| |
score: 73.17 |
e-value: 5.6e-12 |
Identity: 50.72% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|41201723|ref|XP_292012.4| similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) [Homo sa... |
| Match: gi|27730131|ref|XP_217884.1| |
score: 72.4 |
e-value: 9.6e-12 |
Identity: 52.94% |
Span: 204bp (24.2%) |
Frame: 1 |
| gi|27730131|ref|XP_217884.1| similar to RIKEN cDNA 4932702K14 [Rattus norvegicus] |
| Match: gi|1616770|gb|AAB16848.1| |
score: 72.02 |
e-value: 1.2e-11 |
Identity: 46% |
Span: 270bp (32.0%) |
Frame: 1 |
| gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans] |
| Match: gi|4104919|gb|AAD13337.1| |
score: 71.25 |
e-value: 2.1e-11 |
Identity: 50.72% |
Span: 207bp (24.6%) |
Frame: 1 |
| gi|4104919|gb|AAD13337.1| poly(A) binding protein I [Trypanosoma brucei] |
| Match: gi|40740281|gb|EAA59471.1| |
score: 70.48 |
e-value: 3.6e-11 |
Identity: 45.45% |
Span: 267bp (31.7%) |
Frame: 1 |
| gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4] |
| Match: gi|38107608|gb|EAA53755.1| |
score: 69.71 |
e-value: 6.2e-11 |
Identity: 37.29% |
Span: 351bp (41.6%) |
Frame: 1 |
| gi|38107608|gb|EAA53755.1| hypothetical protein MG09505.4 [Magnaporthe grisea 70-15] |
| Match: gi|419961|pir||JN0573 |
score: 69.32 |
e-value: 8.1e-11 |
Identity: 52.86% |
Span: 210bp (24.9%) |
Frame: 1 |
| gi|419961|pir||JN0573 polyadenylate-binding protein - fruit fly (Drosophila melanogaster) |
| Match: gi|7671657|emb|CAB89424.1| |
score: 67.01 |
e-value: 4e-10 |
Identity: 55% |
Span: 180bp (21.4%) |
Frame: 1 |
| gi|7671657|emb|CAB89424.1| dJ1069P2.3.2 (novel PABPC1 (poly(A)-binding protein, cytoplasmic 1) (PABPL1) like protein ... |
| Match: gi|42549055|gb|EAA71898.1| |
score: 66.63 |
e-value: 5.2e-10 |
Identity: 43.66% |
Span: 213bp (25.3%) |
Frame: 1 |
| gi|42549055|gb|EAA71898.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1] |
| Match: gi|38082215|ref|XP_356936.1| |
score: 66.63 |
e-value: 5.2e-10 |
Identity: 45.33% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|38082215|ref|XP_356936.1| similar to poly(A) binding protein, cytoplasmic 4 isoform 2 [Mus musculus] |
| Match: gi|31241725|ref|XP_321293.1| |
score: 66.24 |
e-value: 6.8e-10 |
Identity: 52.63% |
Span: 171bp (20.3%) |
Frame: 1 |
| gi|31241725|ref|XP_321293.1| ENSANGP00000018447 [Anopheles gambiae] gi|21288864|gb|EAA01157.1| ENSANGP00000018447 [An... |
| Match: gi|32407122|ref|XP_324156.1| |
score: 65.85 |
e-value: 8.9e-10 |
Identity: 38.83% |
Span: 276bp (32.7%) |
Frame: 1 |
| gi|32407122|ref|XP_324156.1| hypothetical protein [Neurospora crassa] gi|28921916|gb|EAA31189.1| hypothetical protein... |
| Match: gi|39596513|emb|CAE63132.1| |
score: 65.47 |
e-value: 1.2e-09 |
Identity: 43.04% |
Span: 231bp (27.4%) |
Frame: 1 |
| gi|39596513|emb|CAE63132.1| Hypothetical protein CBG07431 [Caenorhabditis briggsae] |
| Match: gi|38075788|ref|XP_130754.3| |
score: 65.47 |
e-value: 1.2e-09 |
Identity: 52.54% |
Span: 177bp (21.0%) |
Frame: 1 |
| gi|38075788|ref|XP_130754.3| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|17567133|ref|NP_510260.1| |
score: 65.47 |
e-value: 1.2e-09 |
Identity: 40.79% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|17567133|ref|NP_510260.1| PolyA Binding protein (76.0 kD) (pab-2) [Caenorhabditis elegans] gi|7499381|pir||T21095 ... |
| Match: gi|780291|gb|AAA65224.1| |
score: 65.08 |
e-value: 1.5e-09 |
Identity: 42.11% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|780291|gb|AAA65224.1| polyadenylate-binding protein |
| Match: gi|17510879|ref|NP_492727.1| |
score: 65.08 |
e-value: 1.5e-09 |
Identity: 42.11% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|17510879|ref|NP_492727.1| polyadenylate-binding protein, PolyA Binding protein (71.6 kD) (pab-1) [Caenorhabditis e... |
| Match: gi|38422742|emb|CAE54916.1| |
score: 65.08 |
e-value: 1.5e-09 |
Identity: 42.11% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|38422742|emb|CAE54916.1| Hypothetical protein Y106G6H.2b [Caenorhabditis elegans] |
| Match: gi|38422743|emb|CAE54917.1| |
score: 65.08 |
e-value: 1.5e-09 |
Identity: 42.11% |
Span: 222bp (26.3%) |
Frame: 1 |
| gi|38422743|emb|CAE54917.1| Hypothetical protein Y106G6H.2c [Caenorhabditis elegans] |
|
| 34 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At1g49760.1 |
score: 172.2 |
e-value: 2.8e-43 |
Identity: 71.32% |
Span: 375bp (44.5%) |
Frame: 1 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At2g23350.1 |
score: 151.8 |
e-value: 3.9e-37 |
Identity: 61.15% |
Span: 390bp (46.3%) |
Frame: 1 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At4g34110.1 |
score: 143.7 |
e-value: 1.1e-34 |
Identity: 66.67% |
Span: 351bp (41.6%) |
Frame: 1 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At1g71770.1 |
score: 109 |
e-value: 2.9e-24 |
Identity: 67.44% |
Span: 258bp (30.6%) |
Frame: 1 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At1g22760.1 |
score: 106.3 |
e-value: 1.9e-23 |
Identity: 49.59% |
Span: 363bp (43.1%) |
Frame: 1 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At3g19350.1 |
score: 77.8 |
e-value: 7.1e-15 |
Identity: 56.92% |
Span: 195bp (23.1%) |
Frame: 1 |
| At3g19350.1 68410.m02216 hypothetical protein similar to poly(A)-binding protein GB:AAB61594 from [Mesembryanthemum c... |
| Match: At2g36660.1 |
score: 73.17 |
e-value: 1.8e-13 |
Identity: 52.7% |
Span: 210bp (24.9%) |
Frame: 1 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At2g05160.1 |
score: 35.04 |
e-value: 0.053 |
Identity: 31.25% |
Span: 177bp (21.0%) |
Frame: 1 |
| At2g05160.1 68409.m00486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
|
