| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15233167|ref|NP_191721.1| |
score: 280 |
e-value: 1.3e-74 |
Identity: 83.87% |
Span: 555bp (99.8%) |
Frame: 1 |
| RRP41; 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] >gi186511299|ref|NP_001118878.1| RRP41; 3'-5'-exorib... |
| Match: gi|41152247|ref|NP_957033.1| |
score: 196.1 |
e-value: 2.5e-49 |
Identity: 55.14% |
Span: 552bp (99.3%) |
Frame: 1 |
| putative exosome complex exonuclease RRP41 [Danio rerio] >gi37747963|gb|AAH59525.1| Exosc4 protein [Danio rerio] >gi|... |
| Match: gi|33411774|emb|CAD58792.1| |
score: 188 |
e-value: 6.9e-47 |
Identity: 55.14% |
Span: 552bp (99.3%) |
Frame: 1 |
| gi|33411774|emb|CAD58792.1| putative exosome complex exonuclease RRP41 [Bos taurus] |
| Match: gi|34866849|ref|XP_216949.2| |
score: 188 |
e-value: 6.9e-47 |
Identity: 55.14% |
Span: 552bp (99.3%) |
Frame: 1 |
| gi|34866849|ref|XP_216949.2| similar to putative exosome complex exonuclease RRP41 [Rattus norvegicus] |
| Match: gi|9506689|ref|NP_061910.1| |
score: 188 |
e-value: 6.9e-47 |
Identity: 55.14% |
Span: 552bp (99.3%) |
Frame: 1 |
| gi|9506689|ref|NP_061910.1| exosome complex exonuclease RRP41; exosome component Rrp41; ribosomal RNA-processing prot... |
| Match: gi|29611663|ref|NP_780608.1| |
score: 188 |
e-value: 6.9e-47 |
Identity: 55.14% |
Span: 552bp (99.3%) |
Frame: 1 |
| gi|29611663|ref|NP_780608.1| exosome complex exonuclease RRP41 [Mus musculus] gi|21759405|sp|Q921I9|RR41_MOUSE Exosom... |
| Match: gi|18977940|ref|NP_579297.1| |
score: 158.3 |
e-value: 5.8e-38 |
Identity: 49.73% |
Span: 555bp (99.8%) |
Frame: 1 |
| gi|18977940|ref|NP_579297.1| ribonuclease ph [Pyrococcus furiosus DSM 3638] gi|29336822|sp|Q8U0L9|ECX1_PYRFU Probable... |
| Match: gi|14520826|ref|NP_126301.1| |
score: 157.1 |
e-value: 1.3e-37 |
Identity: 49.19% |
Span: 555bp (99.8%) |
Frame: 1 |
| gi|14520826|ref|NP_126301.1| ribonuclease PH [Pyrococcus abyssi] gi|29337010|sp|Q9V119|ECX1_PYRAB Probable exosome co... |
| Match: gi|14591333|ref|NP_143411.1| |
score: 157.1 |
e-value: 1.3e-37 |
Identity: 48.65% |
Span: 555bp (99.8%) |
Frame: 1 |
| gi|14591333|ref|NP_143411.1| hypothetical protein PH1549 [Pyrococcus horikoshii] gi|29336584|sp|O59223|ECX1_PYRHO Pro... |
| Match: gi|20093819|ref|NP_613666.1| |
score: 156 |
e-value: 2.9e-37 |
Identity: 51.45% |
Span: 519bp (93.3%) |
Frame: 1 |
| gi|20093819|ref|NP_613666.1| Predicted exosome subunit, RNase PH [Methanopyrus kandleri AV19] gi|29336819|sp|Q8TYC1|E... |
| Match: gi|15678710|ref|NP_275826.1| |
score: 155.2 |
e-value: 4.9e-37 |
Identity: 45.95% |
Span: 555bp (99.8%) |
Frame: 1 |
| gi|15678710|ref|NP_275826.1| ribonuclease PH [Methanothermobacter thermautotrophicus] gi|29336573|sp|O26779|ECX1_METT... |
| Match: gi|18313178|ref|NP_559845.1| |
score: 154.1 |
e-value: 1.1e-36 |
Identity: 48.86% |
Span: 528bp (95.0%) |
Frame: 1 |
| gi|18313178|ref|NP_559845.1| 3' exoribonuclease family protein [Pyrobaculum aerophilum] gi|29336868|sp|Q8ZVM9|ECX1_PY... |
| Match: gi|31240059|ref|XP_320443.1| |
score: 152.9 |
e-value: 2.4e-36 |
Identity: 45.95% |
Span: 552bp (99.3%) |
Frame: 1 |
| gi|31240059|ref|XP_320443.1| ENSANGP00000017010 [Anopheles gambiae] gi|31240071|ref|XP_320449.1| ENSANGP00000009222 [... |
| Match: gi|15897636|ref|NP_342241.1| |
score: 152.1 |
e-value: 4.2e-36 |
Identity: 46.02% |
Span: 528bp (95.0%) |
Frame: 1 |
| gi|15897636|ref|NP_342241.1| Ribonuclease PH (rph) [Sulfolobus solfataricus] gi|29337007|sp|Q9UXC2|ECX1_SULSO Probabl... |
| Match: gi|15920655|ref|NP_376324.1| |
score: 151.4 |
e-value: 7.1e-36 |
Identity: 48.55% |
Span: 519bp (93.3%) |
Frame: 1 |
| gi|15920655|ref|NP_376324.1| 247aa long hypothetical ribonuclease PH [Sulfolobus tokodaii] gi|29336896|sp|Q975G8|ECX1... |
| Match: gi|11498104|ref|NP_069329.1| |
score: 148.3 |
e-value: 6e-35 |
Identity: 46.81% |
Span: 555bp (99.8%) |
Frame: 1 |
| gi|11498104|ref|NP_069329.1| ribonuclease PH (rph) [Archaeoglobus fulgidus DSM 4304] gi|29336576|sp|O29757|ECX1_ARCFU... |
| Match: gi|23050359|ref|ZP_00077283.1| |
score: 147.9 |
e-value: 7.9e-35 |
Identity: 50% |
Span: 528bp (95.0%) |
Frame: 1 |
| gi|23050359|ref|ZP_00077283.1| COG0689: RNase PH [Methanosarcina barkeri] |
| Match: gi|40217446|emb|CAE46379.1| |
score: 147.5 |
e-value: 1e-34 |
Identity: 45.41% |
Span: 555bp (99.8%) |
Frame: 1 |
| gi|40217446|emb|CAE46379.1| ribonuclease PH [uncultured archaeon] |
| Match: gi|13541138|ref|NP_110826.1| |
score: 146.7 |
e-value: 1.8e-34 |
Identity: 46.02% |
Span: 528bp (95.0%) |
Frame: 1 |
| gi|13541138|ref|NP_110826.1| RNase PH [Thermoplasma volcanium] gi|29336899|sp|Q97BZ5|ECX1_THEVO Probable exosome comp... |
| Match: gi|21228725|ref|NP_634647.1| |
score: 146 |
e-value: 3e-34 |
Identity: 48.3% |
Span: 528bp (95.0%) |
Frame: 1 |
| gi|21228725|ref|NP_634647.1| Ribonuclease [Methanosarcina mazei Goe1] gi|29336795|sp|Q8PTT8|ECX1_METMA Probable exoso... |
| Match: gi|16082286|ref|NP_394747.1| |
score: 145.2 |
e-value: 5.1e-34 |
Identity: 44.32% |
Span: 528bp (95.0%) |
Frame: 1 |
| gi|16082286|ref|NP_394747.1| RNase PH (yeast SIK6) related protein [Thermoplasma acidophilum] gi|29336949|sp|Q9HIP2|E... |
| Match: gi|14601412|ref|NP_147949.1| |
score: 141.4 |
e-value: 7.4e-33 |
Identity: 46.47% |
Span: 510bp (91.7%) |
Frame: 1 |
| gi|14601412|ref|NP_147949.1| ribonuclease PH [Aeropyrum pernix] gi|29337017|sp|Q9YC03|ECX1_AERPE Probable exosome com... |
| Match: gi|24584046|ref|NP_609618.2| |
score: 136.7 |
e-value: 1.8e-31 |
Identity: 42.31% |
Span: 543bp (97.7%) |
Frame: 1 |
| gi|24584046|ref|NP_609618.2| CG15481-PA [Drosophila melanogaster] gi|7298022|gb|AAF53263.1| CG15481-PA [Drosophila me... |
| Match: gi|22406215|ref|ZP_00001067.1| |
score: 136 |
e-value: 3.1e-31 |
Identity: 45.29% |
Span: 510bp (91.7%) |
Frame: 1 |
| gi|22406215|ref|ZP_00001067.1| COG0689: RNase PH [Ferroplasma acidarmanus] |
| Match: gi|17538326|ref|NP_502520.1| |
score: 136 |
e-value: 3.1e-31 |
Identity: 42.86% |
Span: 546bp (98.2%) |
Frame: 1 |
| gi|17538326|ref|NP_502520.1| ribonuclease PH-like (26.1 kD) (4N865) [Caenorhabditis elegans] gi|6226696|sp|Q17533|RR4... |
| Match: gi|17946442|gb|AAL49254.1| |
score: 135.6 |
e-value: 4e-31 |
Identity: 42.31% |
Span: 543bp (97.7%) |
Frame: 1 |
| gi|17946442|gb|AAL49254.1| RE67757p [Drosophila melanogaster] |
| Match: gi|39587718|emb|CAE58656.1| |
score: 135.2 |
e-value: 5.3e-31 |
Identity: 41.76% |
Span: 546bp (98.2%) |
Frame: 1 |
| gi|39587718|emb|CAE58656.1| Hypothetical protein CBG01825 [Caenorhabditis briggsae] |
| Match: gi|19114994|ref|NP_594082.1| |
score: 125.6 |
e-value: 4.2e-28 |
Identity: 44.2% |
Span: 543bp (97.7%) |
Frame: 1 |
| gi|19114994|ref|NP_594082.1| putative ribonuclease PH-like [Schizosaccharomyces pombe] gi|21759394|sp|O42872|RR41_SCH... |
| Match: gi|7435290|pir||T11740 |
score: 125.6 |
e-value: 4.2e-28 |
Identity: 44.2% |
Span: 543bp (97.7%) |
Frame: 1 |
| gi|7435290|pir||T11740 hypothetical protein - fission yeast (Schizosaccharomyces pombe) gi|1749490|dbj|BAA13803.1| si... |
| Match: gi|6321634|ref|NP_011711.1| |
score: 116.7 |
e-value: 1.9e-25 |
Identity: 38.46% |
Span: 543bp (97.7%) |
Frame: 1 |
| gi|6321634|ref|NP_011711.1| superkiller; ExtraCellular Mutant; Ribosomal RNA Processing; Ski6p [Saccharomyces cerevis... |
| Match: gi|23484066|gb|EAA19527.1| |
score: 114 |
e-value: 1.3e-24 |
Identity: 35.56% |
Span: 540bp (97.1%) |
Frame: 1 |
| gi|23484066|gb|EAA19527.1| exonuclease RRP41, putative [Plasmodium yoelii yoelii] |
| Match: gi|41351115|gb|AAH65602.1| |
score: 103.6 |
e-value: 1.7e-21 |
Identity: 33.51% |
Span: 531bp (95.5%) |
Frame: 1 |
| gi|41351115|gb|AAH65602.1| Unknown (protein for IMAGE:6966522) [Danio rerio] |
| Match: gi|23509478|ref|NP_702145.1| |
score: 102.4 |
e-value: 3.8e-21 |
Identity: 33.72% |
Span: 516bp (92.8%) |
Frame: 1 |
| gi|23509478|ref|NP_702145.1| exosome complex exonuclease rrp41, putative [Plasmodium falciparum 3D7] gi|23497324|gb|A... |
| Match: gi|42553839|gb|EAA76682.1| |
score: 97.44 |
e-value: 1.2e-19 |
Identity: 42.21% |
Span: 429bp (77.2%) |
Frame: 1 |
| gi|42553839|gb|EAA76682.1| hypothetical protein FG09363.1 [Gibberella zeae PH-1] |
| Match: gi|42567185|ref|NP_194479.2| |
score: 92.43 |
e-value: 3.9e-18 |
Identity: 32.07% |
Span: 552bp (99.3%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi124300968|gb|ABN04736.1| At4g27490 [A... |
| Match: gi|32409023|ref|XP_324992.1| |
score: 91.66 |
e-value: 6.7e-18 |
Identity: 37.43% |
Span: 510bp (91.7%) |
Frame: 1 |
| gi|32409023|ref|XP_324992.1| hypothetical protein [Neurospora crassa] gi|28926134|gb|EAA35119.1| hypothetical protein... |
| Match: gi|41469640|gb|AAS07363.1| |
score: 90.89 |
e-value: 1.1e-17 |
Identity: 33.73% |
Span: 498bp (89.6%) |
Frame: 1 |
| putative exoribonuclease [Oryza sativa Japonica Group] >gi108712055|gb|ABF99850.1| 3' exoribonuclease family, domain ... |
| Match: gi|42408306|dbj|BAD09460.1| |
score: 89.74 |
e-value: 2.5e-17 |
Identity: 32.53% |
Span: 498bp (89.6%) |
Frame: 1 |
| gi|42408306|dbj|BAD09460.1| putative ribonuclease PH [Oryza sativa (japonica cultivar-group)] |
| Match: gi|14250906|emb|CAC39258.1| |
score: 87.81 |
e-value: 9.7e-17 |
Identity: 36.88% |
Span: 423bp (76.1%) |
Frame: 1 |
| gi|14250906|emb|CAC39258.1| Rrp41p homologue [Trypanosoma brucei] |
| Match: gi|38109224|gb|EAA55128.1| |
score: 85.5 |
e-value: 4.8e-16 |
Identity: 35.05% |
Span: 510bp (91.7%) |
Frame: 1 |
| gi|38109224|gb|EAA55128.1| hypothetical protein MG06785.4 [Magnaporthe grisea 70-15] |
| Match: gi|30794378|ref|NP_082550.1| |
score: 83.96 |
e-value: 1.4e-15 |
Identity: 32.02% |
Span: 492bp (88.5%) |
Frame: 1 |
| gi|30794378|ref|NP_082550.1| Mtr3 (mRNA transport regulator 3)-homolog; Mtr3 (mRNA transport regulator 3)-homolog (ye... |
| Match: gi|41615042|ref|NP_963540.1| |
score: 82.8 |
e-value: 3.1e-15 |
Identity: 33.68% |
Span: 519bp (93.3%) |
Frame: 1 |
| gi|41615042|ref|NP_963540.1| NEQ248 [Nanoarchaeum equitans Kin4-M] gi|40068766|gb|AAR39101.1| NEQ248 [Nanoarchaeum eq... |
| Match: gi|34851927|ref|XP_226471.2| |
score: 80.11 |
e-value: 2e-14 |
Identity: 31.46% |
Span: 492bp (88.5%) |
Frame: 1 |
| gi|34851927|ref|XP_226471.2| similar to homolog of yeast mRNA transport regulator 3 [Rattus norvegicus] |
| Match: gi|40740830|gb|EAA60020.1| |
score: 78.95 |
e-value: 4.5e-14 |
Identity: 32.99% |
Span: 510bp (91.7%) |
Frame: 1 |
| gi|40740830|gb|EAA60020.1| hypothetical protein AN3812.2 [Aspergillus nidulans FGSC A4] |
| Match: gi|17402904|ref|NP_478126.1| |
score: 78.18 |
e-value: 7.6e-14 |
Identity: 31.46% |
Span: 492bp (88.5%) |
Frame: 1 |
| gi|17402904|ref|NP_478126.1| homolog of yeast mRNA transport regulator 3 [Homo sapiens] |
| Match: gi|19113410|ref|NP_596618.1| |
score: 77.41 |
e-value: 1.3e-13 |
Identity: 32.94% |
Span: 492bp (88.5%) |
Frame: 1 |
| gi|19113410|ref|NP_596618.1| low similarity to ribonuclease ph-like protein [Schizosaccharomyces pombe] gi|11359191|p... |
| Match: gi|42544138|ref|NP_064543.2| |
score: 75.48 |
e-value: 5e-13 |
Identity: 32.97% |
Span: 531bp (95.5%) |
Frame: 1 |
| gi|42544138|ref|NP_064543.2| exosome component Rrp46 [Homo sapiens] gi|21693160|gb|AAM75154.1| chronic myelogenous le... |
| Match: gi|14043511|gb|AAH07742.1| |
score: 75.48 |
e-value: 5e-13 |
Identity: 32.97% |
Span: 531bp (95.5%) |
Frame: 1 |
| Exosome component 5 [Homo sapiens] >gi78394993|gb|AAI07697.1| Exosome component 5 [Homo sapiens] >gi|119577442|gb|EAW... |
| Match: gi|14285757|sp|Q9NQT4|RR46_HUMAN |
score: 75.48 |
e-value: 5e-13 |
Identity: 32.97% |
Span: 531bp (95.5%) |
Frame: 1 |
| gi|14285757|sp|Q9NQT4|RR46_HUMAN Exosome complex exonuclease RRP46 (Ribosomal RNA processing protein 46) (p12B) (Chro... |
| Match: gi|20070392|ref|NP_613052.1| |
score: 74.33 |
e-value: 1.1e-12 |
Identity: 38.28% |
Span: 372bp (66.9%) |
Frame: 1 |
| gi|20070392|ref|NP_613052.1| DNA segment, Chr 7, Wayne State University 180, expressed [Mus musculus] gi|21759413|sp|... |
| Match: gi|21706518|gb|AAH34358.1| |
score: 74.33 |
e-value: 1.1e-12 |
Identity: 38.28% |
Span: 372bp (66.9%) |
Frame: 1 |
| gi|21706518|gb|AAH34358.1| DNA segment, Chr 7, Wayne State University 180, expressed [Mus musculus] |
| Match: gi|15600527|ref|NP_254021.1| |
score: 72.79 |
e-value: 3.2e-12 |
Identity: 33.92% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|15600527|ref|NP_254021.1| ribonuclease PH [Pseudomonas aeruginosa PA01] gi|12230959|sp|P50597|RNPH_PSEAE Ribonucle... |
| Match: gi|1079663|gb|AAC44429.1| |
score: 71.25 |
e-value: 9.4e-12 |
Identity: 32.75% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|1079663|gb|AAC44429.1| RNase PH |
| Match: gi|23021335|ref|ZP_00061015.1| |
score: 70.86 |
e-value: 1.2e-11 |
Identity: 31.22% |
Span: 522bp (93.9%) |
Frame: 1 |
| gi|23021335|ref|ZP_00061015.1| COG0689: RNase PH [Clostridium thermocellum ATCC 27405] |
| Match: gi|15231368|ref|NP_190207.1| |
score: 70.48 |
e-value: 1.6e-11 |
Identity: 34.25% |
Span: 432bp (77.7%) |
Frame: 1 |
| 3' exoribonuclease family domain 1-containing protein [Arabidopsis thaliana] >gi79314404|ref|NP_001030817.1| 3' exori... |
| Match: gi|15794595|ref|NP_284417.1| |
score: 70.09 |
e-value: 2.1e-11 |
Identity: 36.14% |
Span: 453bp (81.5%) |
Frame: 1 |
| gi|15794595|ref|NP_284417.1| ribonuclease PH [Neisseria meningitidis Z2491] gi|21759416|sp|Q9JTN2|RNPH_NEIMA Ribonucl... |
| Match: gi|15677352|ref|NP_274507.1| |
score: 70.09 |
e-value: 2.1e-11 |
Identity: 35.54% |
Span: 453bp (81.5%) |
Frame: 1 |
| gi|15677352|ref|NP_274507.1| ribonuclease PH [Neisseria meningitidis MC58] gi|21759417|sp|Q9JYN5|RNPH_NEIMB Ribonucle... |
| Match: gi|27676672|ref|XP_218343.1| |
score: 70.09 |
e-value: 2.1e-11 |
Identity: 39.06% |
Span: 372bp (66.9%) |
Frame: 1 |
| gi|27676672|ref|XP_218343.1| similar to DNA segment, Chr 7, Wayne State University 180, expressed [Rattus norvegicus] |
| Match: gi|27364280|ref|NP_759808.1| |
score: 68.94 |
e-value: 4.6e-11 |
Identity: 34.32% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|27364280|ref|NP_759808.1| RNase PH [Vibrio vulnificus CMCP6] gi|37678463|ref|NP_933072.1| RNase PH [Vibrio vulnifi... |
| Match: gi|34499302|ref|NP_903517.1| |
score: 68.17 |
e-value: 7.9e-11 |
Identity: 35.33% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|34499302|ref|NP_903517.1| tRNA nucleotidyltransferase [Chromobacterium violaceum ATCC 12472] gi|34105153|gb|AAQ615... |
| Match: gi|15640240|ref|NP_229867.1| |
score: 67.78 |
e-value: 1e-10 |
Identity: 34.91% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|15640240|ref|NP_229867.1| ribonuclease PH [Vibrio cholerae O1 biovar eltor str. N16961] gi|11263570|pir||D82350 ri... |
| Match: gi|32398930|emb|CAD98395.1| |
score: 67.78 |
e-value: 1e-10 |
Identity: 31.29% |
Span: 420bp (75.5%) |
Frame: 1 |
| gi|32398930|emb|CAD98395.1| ribonuclease PH-like protein, possible [Cryptosporidium parvum] |
| Match: gi|21759419|sp|Q9KVD6|RNPH_VIBCH |
score: 67.78 |
e-value: 1e-10 |
Identity: 34.91% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|21759419|sp|Q9KVD6|RNPH_VIBCH Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) |
| Match: gi|28896951|ref|NP_796556.1| |
score: 67.78 |
e-value: 1e-10 |
Identity: 33.73% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|28896951|ref|NP_796556.1| ribonuclease PH [Vibrio parahaemolyticus RIMD 2210633] gi|33301645|sp|Q87T93|RNPH_VIBPA ... |
| Match: gi|24375740|ref|NP_719783.1| |
score: 67.01 |
e-value: 1.8e-10 |
Identity: 32.37% |
Span: 462bp (83.1%) |
Frame: 1 |
| gi|24375740|ref|NP_719783.1| ribonuclease PH [Shewanella oneidensis MR-1] gi|24350681|gb|AAN57227.1| ribonuclease PH ... |
| Match: gi|23017504|ref|ZP_00057231.1| |
score: 66.63 |
e-value: 2.3e-10 |
Identity: 33.53% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|23017504|ref|ZP_00057231.1| COG0689: RNase PH [Thermobifida fusca] |
| Match: gi|28867317|ref|NP_789936.1| |
score: 66.63 |
e-value: 2.3e-10 |
Identity: 31.98% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|28867317|ref|NP_789936.1| ribonuclease PH [Pseudomonas syringae pv. tomato str. DC3000] gi|28850551|gb|AAO53631.1|... |
| Match: gi|23335847|ref|ZP_00121079.1| |
score: 66.63 |
e-value: 2.3e-10 |
Identity: 31.95% |
Span: 453bp (81.5%) |
Frame: 1 |
| gi|23335847|ref|ZP_00121079.1| COG0689: RNase PH [Bifidobacterium longum DJO10A] |
| Match: gi|23464887|ref|NP_695490.1| |
score: 66.63 |
e-value: 2.3e-10 |
Identity: 31.95% |
Span: 453bp (81.5%) |
Frame: 1 |
| gi|23464887|ref|NP_695490.1| probable ribonuclease PH [Bifidobacterium longum NCC2705] gi|23325477|gb|AAN24126.1| pro... |
| Match: gi|23469549|ref|ZP_00124883.1| |
score: 66.63 |
e-value: 2.3e-10 |
Identity: 31.98% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|23469549|ref|ZP_00124883.1| COG0689: RNase PH [Pseudomonas syringae pv. syringae B728a] |
| Match: gi|15603741|ref|NP_246815.1| |
score: 66.63 |
e-value: 2.3e-10 |
Identity: 31.74% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|15603741|ref|NP_246815.1| Rph [Pasteurella multocida] gi|21759412|sp|Q9CJW5|RNPH_PASMU Ribonuclease PH (RNase PH) ... |
| Match: gi|12848640|dbj|BAB28033.1| |
score: 66.24 |
e-value: 3e-10 |
Identity: 33.33% |
Span: 369bp (66.4%) |
Frame: 1 |
| gi|12848640|dbj|BAB28033.1| unnamed protein product [Mus musculus] |
| Match: gi|16120397|ref|NP_403710.1| |
score: 66.24 |
e-value: 3e-10 |
Identity: 32.16% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|16120397|ref|NP_403710.1| ribonuclease PH [Yersinia pestis] gi|22124017|ref|NP_667440.1| RNase PH [Yersinia pestis... |
| Match: gi|30065081|ref|NP_839252.1| |
score: 65.85 |
e-value: 3.9e-10 |
Identity: 31.58% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|30065081|ref|NP_839252.1| RNase PH [Shigella flexneri 2a str. 2457T] gi|30043342|gb|AAP19063.1| RNase PH [Shigella... |
| Match: gi|24114912|ref|NP_709422.1| |
score: 65.85 |
e-value: 3.9e-10 |
Identity: 31.58% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|24114912|ref|NP_709422.1| RNase PH [Shigella flexneri 2a str. 301] gi|24054154|gb|AAN45129.1| RNase PH [Shigella f... |
| Match: gi|26250289|ref|NP_756329.1| |
score: 65.47 |
e-value: 5.1e-10 |
Identity: 31.58% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|26250289|ref|NP_756329.1| Ribonuclease PH [Escherichia coli CFT073] gi|26110719|gb|AAN82903.1| Ribonuclease PH [Es... |
| Match: gi|29653650|ref|NP_819342.1| |
score: 65.47 |
e-value: 5.1e-10 |
Identity: 33.33% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|29653650|ref|NP_819342.1| ribonuclease PH [Coxiella burnetii RSA 493] gi|29540912|gb|AAO89856.1| ribonuclease PH [... |
| Match: gi|15804184|ref|NP_290223.1| |
score: 65.47 |
e-value: 5.1e-10 |
Identity: 31.58% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|15804184|ref|NP_290223.1| RNase PH [Escherichia coli O157:H7 EDL933] gi|15833772|ref|NP_312545.1| RNase PH [Escher... |
| Match: gi|28493589|ref|NP_787750.1| |
score: 64.31 |
e-value: 1.1e-09 |
Identity: 32.16% |
Span: 462bp (83.1%) |
Frame: 1 |
| gi|28493589|ref|NP_787750.1| ribonuclease PH [Tropheryma whipplei str. Twist] gi|28572785|ref|NP_789565.1| ribonuclea... |
| Match: gi|21759423|sp|Q9X528|RNPH_LEGPN |
score: 64.31 |
e-value: 1.1e-09 |
Identity: 32.16% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|21759423|sp|Q9X528|RNPH_LEGPN Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) gi|4704704|gb|AAD28218.1| r... |
| Match: gi|23060372|ref|ZP_00085279.1| |
score: 64.31 |
e-value: 1.1e-09 |
Identity: 31.4% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|23060372|ref|ZP_00085279.1| COG0689: RNase PH [Pseudomonas fluorescens PfO-1] |
| Match: gi|16762575|ref|NP_458192.1| |
score: 64.31 |
e-value: 1.1e-09 |
Identity: 30.99% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|16762575|ref|NP_458192.1| RNase PH [Salmonella enterica subsp. enterica serovar Typhi] gi|16767019|ref|NP_462634.1... |
| Match: gi|16131514|ref|NP_418100.1| |
score: 63.93 |
e-value: 1.5e-09 |
Identity: 30.99% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|16131514|ref|NP_418100.1| RNase PH [Escherichia coli K12] gi|290493|gb|AAA61996.1| RNase PH gi|1790074|gb|AAC76667... |
| Match: gi|401009|sp|P03842|RNPH_ECOLI |
score: 63.93 |
e-value: 1.5e-09 |
Identity: 30.99% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|401009|sp|P03842|RNPH_ECOLI Ribonuclease PH (RNase PH) (tRNA nucleotidyltransferase) |
| Match: gi|15827593|ref|NP_301856.1| |
score: 63.54 |
e-value: 1.9e-09 |
Identity: 29.35% |
Span: 540bp (97.1%) |
Frame: 1 |
| gi|15827593|ref|NP_301856.1| ribonuclease PH [Mycobacterium leprae] gi|585906|sp|P37939|RNPH_MYCLE Ribonuclease PH (R... |
| Match: gi|22998514|ref|ZP_00042575.1| |
score: 63.54 |
e-value: 1.9e-09 |
Identity: 32.73% |
Span: 450bp (80.9%) |
Frame: 1 |
| gi|22998514|ref|ZP_00042575.1| COG0689: RNase PH [Magnetococcus sp. MC-1] |
| Match: gi|39996894|ref|NP_952845.1| |
score: 63.54 |
e-value: 1.9e-09 |
Identity: 32.95% |
Span: 474bp (85.3%) |
Frame: 1 |
| gi|39996894|ref|NP_952845.1| ribonuclease PH [Geobacter sulfurreducens PCA] gi|39983782|gb|AAR35172.1| ribonuclease P... |
| Match: gi|23102645|ref|ZP_00089147.1| |
score: 63.54 |
e-value: 1.9e-09 |
Identity: 31.95% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|23102645|ref|ZP_00089147.1| COG0689: RNase PH [Azotobacter vinelandii] |
| Match: gi|37928168|pdb|1UDO|A |
score: 63.16 |
e-value: 2.5e-09 |
Identity: 31.93% |
Span: 453bp (81.5%) |
Frame: 1 |
| gi|37928168|pdb|1UDO|A Chain A, Crystal Structure Of The Trna Processing Enzyme Rnase Ph R86a Mutant From Aquifex Aeo... |
| Match: gi|1945337|emb|CAA97223.1| |
score: 63.16 |
e-value: 2.5e-09 |
Identity: 43.59% |
Span: 234bp (42.1%) |
Frame: 1 |
| gi|1945337|emb|CAA97223.1| unnamed protein product [Saccharomyces cerevisiae] |
| Match: gi|26991970|ref|NP_747395.1| |
score: 62.77 |
e-value: 3.3e-09 |
Identity: 31.4% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|26991970|ref|NP_747395.1| ribonuclease PH [Pseudomonas putida KT2440] gi|24987100|gb|AAN70859.1| ribonuclease PH [... |
| Match: gi|15606253|ref|NP_213631.1| |
score: 62.77 |
e-value: 3.3e-09 |
Identity: 32.53% |
Span: 453bp (81.5%) |
Frame: 1 |
| gi|15606253|ref|NP_213631.1| RNase PH [Aquifex aeolicus] gi|6094114|sp|O67069|RNPH_AQUAE Ribonuclease PH (RNase PH) (... |
| Match: gi|21221351|ref|NP_627130.1| |
score: 62.39 |
e-value: 4.3e-09 |
Identity: 31.36% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|21221351|ref|NP_627130.1| putative ribonuclease PH [Streptomyces coelicolor A3(2)] gi|21759422|sp|Q9S2H7|RNPH_STRC... |
| Match: gi|39933406|ref|NP_945682.1| |
score: 62.39 |
e-value: 4.3e-09 |
Identity: 38% |
Span: 267bp (48.0%) |
Frame: 1 |
| gi|39933406|ref|NP_945682.1| ribonuclease PH [Rhodopseudomonas palustris] gi|39647252|emb|CAE25773.1| ribonuclease PH... |
| Match: gi|41725667|ref|ZP_00152425.1| |
score: 62.39 |
e-value: 4.3e-09 |
Identity: 32.16% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|41725667|ref|ZP_00152425.1| hypothetical protein Daro062501 [Dechloromonas aromatica RCB] |
| Match: gi|16272231|ref|NP_438442.1| |
score: 62.39 |
e-value: 4.3e-09 |
Identity: 30.99% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|16272231|ref|NP_438442.1| ribonuclease PH [Haemophilus influenzae Rd] gi|1173102|sp|P44444|RNPH_HAEIN Ribonuclease... |
| Match: gi|21232680|ref|NP_638597.1| |
score: 62 |
e-value: 5.7e-09 |
Identity: 31.14% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|21232680|ref|NP_638597.1| ribonuclease PH [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|24638173|sp|Q... |
| Match: gi|30248295|ref|NP_840365.1| |
score: 62 |
e-value: 5.7e-09 |
Identity: 32.94% |
Span: 465bp (83.6%) |
Frame: 1 |
| gi|30248295|ref|NP_840365.1| 3' exoribonuclease family [Nitrosomonas europaea ATCC 19718] gi|30138181|emb|CAD84187.1|... |
| Match: gi|20807113|ref|NP_622284.1| |
score: 61.62 |
e-value: 7.4e-09 |
Identity: 31.14% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|20807113|ref|NP_622284.1| RNase PH [Thermoanaerobacter tengcongensis] gi|22096086|sp|Q8RC30|RNPH_THETN Ribonucleas... |
| Match: gi|23467185|ref|ZP_00122769.1| |
score: 61.62 |
e-value: 7.4e-09 |
Identity: 31.95% |
Span: 456bp (82.0%) |
Frame: 1 |
| gi|23467185|ref|ZP_00122769.1| COG0689: RNase PH [Haemophilus somnus 129PT] |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At3g61620.1 |
score: 280 |
e-value: 4.8e-76 |
Identity: 83.87% |
Span: 555bp (99.8%) |
Frame: 1 |
| At3g61620.1 68410.m06380 exonuclease RRP41 |
| Match: At3g46210.1 |
score: 70.48 |
e-value: 5.8e-13 |
Identity: 34.25% |
Span: 432bp (77.7%) |
Frame: 1 |
| At3g46210.1 68410.m04633 expressed protein tRNA nucleotidyltransferase, Methanobacterium thermoautotrophicum, PIR:A69... |
| Match: At5g14580.1 |
score: 46.21 |
e-value: 1.2e-05 |
Identity: 26.6% |
Span: 513bp (92.3%) |
Frame: 1 |
| At5g14580.1 68412.m01577 polynucleotide phosphorylase |
| Match: At4g27490.1 |
score: 44.67 |
e-value: 3.4e-05 |
Identity: 22.44% |
Span: 357bp (64.2%) |
Frame: 1 |
| At4g27490.1 68411.m03596 expressed protein tRNA nucleotidyltransferase -Methanobacterium thermoautotrophicum,PID:g262... |
| Match: At3g03710.1 |
score: 41.2 |
e-value: 0.00037 |
Identity: 23.59% |
Span: 537bp (96.6%) |
Frame: 1 |
| At3g03710.1 68410.m00348 polyribonucleotide nucleotidyltransferase, putative similar to polynucleotide phosphorylase ... |
|
