| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|34761728|gb|AAQ82037.1| |
score: 121.3 |
e-value: 3.3e-27 |
Identity: 56.84% |
Span: 285bp (91.9%) |
Frame: 1 |
| gag/pol polyprotein [Pisum sativum] |
| Match: gi|34761721|gb|AAQ82033.1| |
score: 120.9 |
e-value: 4.4e-27 |
Identity: 56.84% |
Span: 285bp (91.9%) |
Frame: 1 |
| gag/pol polyprotein [Pisum sativum] |
| Match: gi|18568275|gb|AAL76007.1| |
score: 112.8 |
e-value: 1.2e-24 |
Identity: 52.43% |
Span: 309bp (99.7%) |
Frame: 1 |
| gi|18568275|gb|AAL76007.1| prpol [Zea mays] |
| Match: gi|7489805|pir||T14595 |
score: 112.1 |
e-value: 2e-24 |
Identity: 52.43% |
Span: 309bp (99.7%) |
Frame: 1 |
| gi|7489805|pir||T14595 polyprotein - maize retrotransposon Cinful-1 gi|4206306|gb|AAD11615.1| prpol [Zea mays] |
| Match: gi|18254415|gb|AAL66756.1| |
score: 110.5 |
e-value: 5.9e-24 |
Identity: 51.46% |
Span: 309bp (99.7%) |
Frame: 1 |
| gi|18254415|gb|AAL66756.1| putative prpol [Zea mays] |
| Match: gi|21741300|emb|CAD41263.1| |
score: 109.8 |
e-value: 1e-23 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|21741300|emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa (japonica cultivar-group)] gi|38344987|emb|CAE02793.2| OSJN... |
| Match: gi|34905548|ref|NP_914121.1| |
score: 109.4 |
e-value: 1.3e-23 |
Identity: 53.92% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|34905548|ref|NP_914121.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|21328160|dbj|BAC00737.1... |
| Match: gi|20161451|dbj|BAB90375.1| |
score: 109 |
e-value: 1.7e-23 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|20161451|dbj|BAB90375.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411562|pir||G84516 |
score: 108.2 |
e-value: 2.9e-23 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|25411562|pir||G84516 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4263831|gb|AAD1547... |
| Match: gi|37534078|ref|NP_921341.1| |
score: 107.8 |
e-value: 3.8e-23 |
Identity: 51.96% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|37534078|ref|NP_921341.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19881722|gb|AAM01123.1... |
| Match: gi|13940598|gb|AAK50400.1| |
score: 107.8 |
e-value: 3.8e-23 |
Identity: 51.96% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|13940598|gb|AAK50400.1| Putative retroelement [Oryza sativa] |
| Match: gi|34015181|gb|AAQ56376.1| |
score: 107.8 |
e-value: 3.8e-23 |
Identity: 54.74% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34015181|gb|AAQ56376.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|34015206|gb|AAQ56400.1| p... |
| Match: gi|37533606|ref|NP_921105.1| |
score: 107.5 |
e-value: 5e-23 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|37533606|ref|NP_921105.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|23396194|gb|AAN31788.1|... |
| Match: gi|25402907|pir||H86337 |
score: 107.5 |
e-value: 5e-23 |
Identity: 50.98% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|25402907|pir||H86337 protein F5M15.26 [imported] - Arabidopsis thaliana gi|8778610|gb|AAF79618.1| F5M15.26 [Arabid... |
| Match: gi|27552545|gb|AAO19368.1| |
score: 107.1 |
e-value: 6.5e-23 |
Identity: 51.96% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|27552545|gb|AAO19368.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38605797|emb|CAD39994.3| |
score: 107.1 |
e-value: 6.5e-23 |
Identity: 55.79% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38605797|emb|CAD39994.3| OSJNBb0045P24.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37533484|ref|NP_921044.1| |
score: 106.7 |
e-value: 8.5e-23 |
Identity: 52.94% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|37533484|ref|NP_921044.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|18057150|gb|AAL58173.1|... |
| Match: gi|37532602|ref|NP_920603.1| |
score: 106.3 |
e-value: 1.1e-22 |
Identity: 51.96% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|37532602|ref|NP_920603.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|21672028|gb|AAM74390.1... |
| Match: gi|4378066|gb|AAD19359.1| |
score: 106.3 |
e-value: 1.1e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|4378066|gb|AAD19359.1| polyprotein [Sorghum bicolor] gi|4680208|gb|AAD27571.1| polyprotein [Sorghum bicolor] |
| Match: gi|34896716|ref|NP_909702.1| |
score: 106.3 |
e-value: 1.1e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34896716|ref|NP_909702.1| putative GAG-POL precursor [Oryza sativa (japonica cultivar-group)] gi|28269460|gb|AAO38... |
| Match: gi|21740431|emb|CAD41616.1| |
score: 106.3 |
e-value: 1.1e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|21740431|emb|CAD41616.1| OSJNBa0091D06.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345992|emb|CAE01940.2| |
score: 105.9 |
e-value: 1.5e-22 |
Identity: 51.96% |
Span: 306bp (98.7%) |
Frame: 1 |
| OSJNBa0073L13.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346013|emb|CAE03952.2| |
score: 105.5 |
e-value: 1.9e-22 |
Identity: 54.74% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346013|emb|CAE03952.2| OSJNBb0085H11.1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411637|pir||F84528 |
score: 105.1 |
e-value: 2.5e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|25411637|pir||F84528 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4544372|gb|AAD2228... |
| Match: gi|34015295|gb|AAQ56486.1| |
score: 105.1 |
e-value: 2.5e-22 |
Identity: 52.63% |
Span: 285bp (91.9%) |
Frame: 1 |
| putative polyprotein [Oryza sativa Japonica Group] |
| Match: gi|38605802|emb|CAE05270.2| |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| OSJNBb0014D23.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37532500|ref|NP_920552.1| |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 50% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|37532500|ref|NP_920552.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|13992677|gb|AAK51571.1... |
| Match: gi|32489468|emb|CAE05822.1| |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 54.74% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|32489468|emb|CAE05822.1| OSJNBa0028M15.14 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|41393250|gb|AAS01973.1| |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|41393250|gb|AAS01973.1| putative retrotransposon protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37532234|ref|NP_920419.1| |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 50.98% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|37532234|ref|NP_920419.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|19225035|gb|AAL86511.1|... |
| Match: gi|29126356|gb|AAO66548.1| |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|29126356|gb|AAO66548.1| putative GAG-POL precursor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25405445|pir||E96549 |
score: 104.8 |
e-value: 3.2e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|25405445|pir||E96549 hypothetical protein F11M15.5 [imported] - Arabidopsis thaliana gi|4836930|gb|AAD30632.1| Hyp... |
| Match: gi|38347171|emb|CAE05575.2| |
score: 104.4 |
e-value: 4.2e-22 |
Identity: 50.98% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|38347171|emb|CAE05575.2| OSJNBa0032N05.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34015144|gb|AAQ56341.1| |
score: 104.4 |
e-value: 4.2e-22 |
Identity: 54.74% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34015144|gb|AAQ56341.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32487411|emb|CAE05745.1| |
score: 104.4 |
e-value: 4.2e-22 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| OSJNBb0017I01.25 [Oryza sativa (japonica cultivar-group)] >gi32488627|emb|CAE03420.1| OSJNBa0032F06.3 [Oryza sativa (... |
| Match: gi|34895680|ref|NP_909189.1| |
score: 104.4 |
e-value: 4.2e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34895680|ref|NP_909189.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|12328555|dbj|BAB21213.1... |
| Match: gi|34015092|gb|AAQ56290.1| |
score: 104.4 |
e-value: 4.2e-22 |
Identity: 54.74% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34015092|gb|AAQ56290.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31249750|gb|AAP46242.1| |
score: 104 |
e-value: 5.5e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|31249750|gb|AAP46242.1| putative gag-pol precursor, 3'-partial [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914092|ref|NP_918393.1| |
score: 104 |
e-value: 5.5e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34914092|ref|NP_918393.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|18844934|dbj|BAB85403.1... |
| Match: gi|25411604|pir||A84525 |
score: 104 |
e-value: 5.5e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|25411604|pir||A84525 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4115365|gb|AAD0336... |
| Match: gi|34905400|ref|NP_914047.1| |
score: 104 |
e-value: 5.5e-22 |
Identity: 52.63% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34905400|ref|NP_914047.1| putative prpol [Oryza sativa (japonica cultivar-group)] gi|21743349|dbj|BAC03342.1| puta... |
| Match: gi|34897288|ref|NP_909990.1| |
score: 104 |
e-value: 5.5e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34897288|ref|NP_909990.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|28372690|gb|AAO39... |
| Match: gi|37535912|ref|NP_922258.1| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|37535912|ref|NP_922258.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|22324957|gb|AAM95... |
| Match: gi|34894140|ref|NP_908395.1| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34894140|ref|NP_908395.1| putative GAG-POL precursor [Oryza sativa (japonica cultivar-group)] gi|17385669|dbj|BAB7... |
| Match: gi|37531182|ref|NP_919893.1| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|37531182|ref|NP_919893.1| putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|20177635|gb|AAM14... |
| Match: gi|38567657|emb|CAE75940.1| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 51.96% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|38567657|emb|CAE75940.1| B1159F04.3 [Oryza sativa (japonica cultivar-group)] gi|38567815|emb|CAE05804.2| OSJNBb004... |
| Match: gi|32488455|emb|CAE03388.1| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|32488455|emb|CAE03388.1| OSJNBa0004N05.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32488012|emb|CAE02875.1| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 53.68% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|32488012|emb|CAE02875.1| OSJNBb0022F23.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345903|emb|CAE03547.2| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38345903|emb|CAE03547.2| OSJNBa0060D06.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38345834|emb|CAD41940.2| |
score: 103.6 |
e-value: 7.2e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38345834|emb|CAD41940.2| OSJNBa0070M12.17 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32488015|emb|CAE02878.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|32488015|emb|CAE02878.1| OSJNBb0022F23.15 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914218|ref|NP_918456.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34914218|ref|NP_918456.1| P0697C12.16 [Oryza sativa (japonica cultivar-group)] gi|15528735|dbj|BAB64681.1| P0697C1... |
| Match: gi|34911720|ref|NP_917207.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34911720|ref|NP_917207.1| P0707D10.24 [Oryza sativa (japonica cultivar-group)] gi|13603439|dbj|BAB40166.1| P0707D1... |
| Match: gi|38346194|emb|CAD39523.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346194|emb|CAD39523.2| OSJNBa0027O01.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|41469319|gb|AAS07175.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|41469319|gb|AAS07175.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344801|emb|CAE03002.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344801|emb|CAE03002.2| OSJNBa0043L09.21 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34912018|ref|NP_917356.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34912018|ref|NP_917356.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|18844802|dbj|BAB85272.1... |
| Match: gi|38344591|emb|CAE05339.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344591|emb|CAE05339.2| OSJNBa0079M09.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914078|ref|NP_918386.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34914078|ref|NP_918386.1| B1064G04.18 [Oryza sativa (japonica cultivar-group)] gi|18844927|dbj|BAB85396.1| B1064G0... |
| Match: gi|34913990|ref|NP_918342.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34913990|ref|NP_918342.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|20146293|dbj|BAB89075.1... |
| Match: gi|34911668|ref|NP_917181.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34911668|ref|NP_917181.1| P0510C12.24 [Oryza sativa (japonica cultivar-group)] gi|20161557|dbj|BAB90479.1| P0510C1... |
| Match: gi|34912062|ref|NP_917378.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34912062|ref|NP_917378.1| P0445H04.33 [Oryza sativa (japonica cultivar-group)] gi|20521216|dbj|BAB91733.1| P0671D0... |
| Match: gi|38344116|emb|CAE01723.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344116|emb|CAE01723.2| OSJNBb0050O03.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34911946|ref|NP_917320.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34911946|ref|NP_917320.1| P0694A04.3 [Oryza sativa (japonica cultivar-group)] gi|15290027|dbj|BAB63721.1| P0694A04... |
| Match: gi|34895270|ref|NP_908977.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34895270|ref|NP_908977.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|11034611|dbj|BAB17135.1... |
| Match: gi|34906548|ref|NP_914621.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34906548|ref|NP_914621.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|18844974|dbj|BAB85442.1... |
| Match: gi|38345168|emb|CAE03072.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38345168|emb|CAE03072.2| OSJNBa0089E12.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38347469|emb|CAE05289.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38347469|emb|CAE05289.2| OSJNBa0084N21.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344478|emb|CAE05493.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344478|emb|CAE05493.2| OSJNBa0022H21.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32488934|emb|CAE04515.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|32488934|emb|CAE04515.1| OSJNBb0059K02.25 [Oryza sativa (japonica cultivar-group)] gi|38345897|emb|CAE03541.2| OSJ... |
| Match: gi|38567773|emb|CAE76060.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38567773|emb|CAE76060.1| B1248C03.19 [Oryza sativa (japonica cultivar-group)] gi|38567781|emb|CAE76067.1| B1340F09... |
| Match: gi|38346434|emb|CAD40221.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346434|emb|CAD40221.2| OSJNBa0019J05.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|14091854|gb|AAK53857.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|14091854|gb|AAK53857.1| Putative retroelement [Oryza sativa] |
| Match: gi|38344386|emb|CAD40323.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344386|emb|CAD40323.2| OSJNBb0054B09.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|13236667|gb|AAK16189.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|13236667|gb|AAK16189.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|37718794|gb|AAR01665.1| ... |
| Match: gi|37991909|gb|AAR06355.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|37991909|gb|AAR06355.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|41469575|gb|AAS07318.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|41469575|gb|AAS07318.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|40714700|gb|AAR88606.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|40714700|gb|AAR88606.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346777|emb|CAE02196.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346777|emb|CAE02196.2| OSJNBa0095H06.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32489819|emb|CAE04563.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| OSJNBb0039L24.2 [Oryza sativa (japonica cultivar-group)] >gi38346770|emb|CAD41151.2| OSJNBa0081C01.21 [Oryza sativa (... |
| Match: gi|34895138|ref|NP_908894.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34895138|ref|NP_908894.1| putative GAG-POL precursor [Oryza sativa (japonica cultivar-group)] gi|15290202|dbj|BAB6... |
| Match: gi|38346727|emb|CAE04877.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346727|emb|CAE04877.2| OSJNBa0086O06.25 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34015289|gb|AAQ56480.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34015289|gb|AAQ56480.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344457|emb|CAE04928.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344457|emb|CAE04928.2| OSJNBa0017P10.5 [Oryza sativa (japonica cultivar-group)] gi|38345442|emb|CAE03294.2| OSJN... |
| Match: gi|38345754|emb|CAE03482.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38345754|emb|CAE03482.2| OSJNBa0065O17.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344641|emb|CAE05074.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344641|emb|CAE05074.2| OSJNBa0094P09.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34899206|ref|NP_910949.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34899206|ref|NP_910949.1| similar to gag-ppl polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34902176|ref|NP_912434.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34902176|ref|NP_912434.1| Putative gag-pol precursor [Oryza sativa (japonica cultivar-group)] gi|27476094|gb|AAO17... |
| Match: gi|38344645|emb|CAE05078.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344645|emb|CAE05078.2| OSJNBa0094P09.17 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|14192869|gb|AAK55774.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|14192869|gb|AAK55774.1| Putative polyprotein [Oryza sativa] |
| Match: gi|34894774|ref|NP_908712.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|34894774|ref|NP_908712.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|13366008|dbj|BAB39285.1... |
| Match: gi|38345112|emb|CAE01613.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38345112|emb|CAE01613.2| OSJNBa0067G20.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344136|emb|CAE01816.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344136|emb|CAE01816.2| OSJNBa0041A02.3 [Oryza sativa (japonica cultivar-group)] gi|38345781|emb|CAD41821.2| OSJN... |
| Match: gi|38346291|emb|CAE04174.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346291|emb|CAE04174.2| OSJNBa0029C04.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346981|emb|CAD40289.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38346981|emb|CAD40289.2| OSJNBb0062H02.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34896552|ref|NP_909620.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.98% |
Span: 306bp (98.7%) |
Frame: 1 |
| gi|34896552|ref|NP_909620.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|31126674|gb|AAP44597.1|... |
| Match: gi|38344085|emb|CAE01745.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38344085|emb|CAE01745.2| OSJNBb0056F09.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|18087677|gb|AAL58969.1| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|18087677|gb|AAL58969.1| putative gag-pol precursor [Oryza sativa] |
| Match: gi|38345498|emb|CAD41709.2| |
score: 103.2 |
e-value: 9.4e-22 |
Identity: 50.53% |
Span: 285bp (91.9%) |
Frame: 1 |
| gi|38345498|emb|CAD41709.2| OSJNBa0010D21.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34015295|gb|AAQ56486.1| |
score: 72.02 |
e-value: 2.3e-12 |
Identity: 46.84% |
Span: 237bp (76.5%) |
Frame: 1 |
| putative polyprotein [Oryza sativa Japonica Group] |
|
| 151 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 40 hits recorded |
| Match: At2g14400.1 |
score: 108.2 |
e-value: 7e-25 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| At2g14400.1 68409.m01457 polyprotein, putative similar to GAG-POL precursor [Oryza sativa (japonica cultivar-group)] ... |
| Match: At1g20390.1 |
score: 107.5 |
e-value: 1.2e-24 |
Identity: 50.98% |
Span: 306bp (98.7%) |
Frame: 1 |
| At1g20390.1 68408.m02295 retrotransposon gag protein family similar to GAG-POL precursor [Oryza sativa (japonica cult... |
| Match: At2g15410.1 |
score: 105.1 |
e-value: 5.9e-24 |
Identity: 51.58% |
Span: 285bp (91.9%) |
Frame: 1 |
| At2g15410.1 68409.m01579 retrotransposon gag protein family similar to GAG-POL precursor [Oryza sativa (japonica cult... |
| Match: At4g03800.1 |
score: 101.3 |
e-value: 8.5e-23 |
Identity: 48.42% |
Span: 285bp (91.9%) |
Frame: 1 |
| At4g03800.1 68411.m00476 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to GAG-POL precu... |
| Match: At1g40113.1 |
score: 99.37 |
e-value: 3.2e-22 |
Identity: 48.42% |
Span: 285bp (91.9%) |
Frame: 1 |
| At1g40113.1 68408.m04338 GAG-POL precursor (gypsy_Ty3-element) [Oryza sativa] -related (GB:BAA84458) temporary gene ... |
| Match: At2g14380.1 |
score: 98.98 |
e-value: 4.2e-22 |
Identity: 49.46% |
Span: 279bp (90.0%) |
Frame: 1 |
| At2g14380.1 68409.m01455 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to GAG-POL precu... |
| Match: At2g13210.1 |
score: 97.83 |
e-value: 9.4e-22 |
Identity: 47.37% |
Span: 285bp (91.9%) |
Frame: 1 |
| At2g13210.1 68409.m01318 retroelement pol polyprotein -related |
| Match: At2g13330.1 |
score: 87.04 |
e-value: 1.7e-18 |
Identity: 57.35% |
Span: 204bp (65.8%) |
Frame: 1 |
| At2g13330.1 68409.m01330 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to GAG-POL precu... |
| Match: At1g42375.1 |
score: 83.96 |
e-value: 1.4e-17 |
Identity: 41.59% |
Span: 285bp (91.9%) |
Frame: 1 |
| At1g42375.1 68408.m04470 retroelement, putative similar to Athila ORF 1 [Arabidopsis thaliana] GI:806535; contains Pf... |
| Match: At5g32426.1 |
score: 83.57 |
e-value: 1.8e-17 |
Identity: 41.59% |
Span: 285bp (91.9%) |
Frame: 1 |
| At5g32426.1 68412.m03447 polyprotein-related low similarity to protease, reverse transcriptase, ribonuclease H, integ... |
| Match: At3g11970.1 |
score: 80.88 |
e-value: 1.2e-16 |
Identity: 51.9% |
Span: 237bp (76.5%) |
Frame: 1 |
| At3g11970.1 68410.m01326 polyprotein, putative similar to polyprotein [Lycopersicon esculentum] GI:4235644; contains ... |
| Match: At1g36590.1 |
score: 80.88 |
e-value: 1.2e-16 |
Identity: 51.9% |
Span: 237bp (76.5%) |
Frame: 1 |
| At1g36590.1 68408.m04141 polyprotein, putative similar to polyprotein [Lycopersicon esculentum] GI:4235644; contains ... |
| Match: At2g14040.1 |
score: 79.72 |
e-value: 2.7e-16 |
Identity: 39.82% |
Span: 285bp (91.9%) |
Frame: 1 |
| At2g14040.1 68409.m01413 retroelement-related low similarity to Athila ORF 1 [Arabidopsis thaliana] GI:806535; contai... |
| Match: At1g37060.1 |
score: 78.18 |
e-value: 7.7e-16 |
Identity: 38.94% |
Span: 285bp (91.9%) |
Frame: 1 |
| At1g37060.1 68408.m04208 retroelement, putative similar to Athila ORF 1 [Arabidopsis thaliana] GI:806535; contains Pf... |
| Match: At2g05610.1 |
score: 77.41 |
e-value: 1.3e-15 |
Identity: 49.37% |
Span: 237bp (76.5%) |
Frame: 1 |
| At2g05610.1 68409.m00534 polyprotein, putative similar to polyprotein [Lycopersicon esculentum] GI:4235644; contains ... |
| Match: At2g07660.1 |
score: 77.03 |
e-value: 1.7e-15 |
Identity: 44% |
Span: 291bp (93.9%) |
Frame: 1 |
| At2g07660.1 68409.m00791 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At2g01026.1 |
score: 75.87 |
e-value: 3.8e-15 |
Identity: 43.3% |
Span: 291bp (93.9%) |
Frame: 1 |
| At2g01026.1 68409.m00003 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At4g10580.1 |
score: 75.87 |
e-value: 3.8e-15 |
Identity: 41.24% |
Span: 291bp (93.9%) |
Frame: 1 |
| At4g10580.1 68411.m01565 retrotransposon gag protein-related contains Pfam profiles PF00078: Reverse transcriptase (R... |
| Match: At2g01034.1 |
score: 75.87 |
e-value: 3.8e-15 |
Identity: 42% |
Span: 291bp (93.9%) |
Frame: 1 |
| At2g01034.1 68409.m00006 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At2g10780.1 |
score: 74.33 |
e-value: 1.1e-14 |
Identity: 46.84% |
Span: 237bp (76.5%) |
Frame: 1 |
| At2g10780.1 68409.m01020 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At1g35370.1 |
score: 73.94 |
e-value: 1.5e-14 |
Identity: 48.1% |
Span: 237bp (76.5%) |
Frame: 1 |
| At1g35370.1 68408.m03988 polyprotein, putative similar to polyprotein [Lycopersicon esculentum] GI:4235644; contains ... |
| Match: At1g34080.1 |
score: 73.56 |
e-value: 1.9e-14 |
Identity: 53.23% |
Span: 186bp (60.0%) |
Frame: 1 |
| At1g34080.1 68408.m03834 hypothetical protein similar to putative retroelement gag/pol polyprotein GI:4557066 from [A... |
| Match: At3g32917.1 |
score: 72.79 |
e-value: 3.2e-14 |
Identity: 42% |
Span: 291bp (93.9%) |
Frame: 1 |
| At3g32917.1 68410.m03854 retrotransposon gag protein family contains Pfam profiles PF03732: Retrotransposon gag prote... |
| Match: At2g01028.1 |
score: 72.4 |
e-value: 4.2e-14 |
Identity: 41% |
Span: 291bp (93.9%) |
Frame: 1 |
| At2g01028.1 68409.m00004 reverse transcriptase (RNA-dependent DNA polymerase) family protein contains Pfam profiles P... |
| Match: At2g04670.1 |
score: 72.4 |
e-value: 4.2e-14 |
Identity: 43% |
Span: 291bp (93.9%) |
Frame: 1 |
| At2g04670.1 68409.m00426 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At2g01022.1 |
score: 69.71 |
e-value: 2.7e-13 |
Identity: 42% |
Span: 291bp (93.9%) |
Frame: 1 |
| At2g01022.1 68409.m00001 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At3g33076.1 |
score: 68.94 |
e-value: 4.7e-13 |
Identity: 41.49% |
Span: 282bp (91.0%) |
Frame: 1 |
| At3g33076.1 68410.m03915 retrotransposon gag protein family similar to gag-pol polyprotein [Zea mays] GI:22296822; co... |
| Match: At5g32592.1 |
score: 68.17 |
e-value: 8e-13 |
Identity: 38.05% |
Span: 285bp (91.9%) |
Frame: 1 |
| At5g32592.1 68412.m03485 polyprotein-related low similarity to protease, reverse transcriptase, ribonuclease H, integ... |
| Match: At2g14650.1 |
score: 64.7 |
e-value: 8.8e-12 |
Identity: 45.33% |
Span: 225bp (72.6%) |
Frame: 1 |
| At2g14650.1 68409.m01487 polyprotein, putative similar to polyprotein [Ananas comosus] GI:2995405; contains Pfam prof... |
| Match: At1g35647.1 |
score: 64.7 |
e-value: 8.8e-12 |
Identity: 46.58% |
Span: 219bp (70.6%) |
Frame: 1 |
| At1g35647.1 68408.m04030 gag-pol polyprotein, putative similar to gag-pol polyprotein [Zea mays] GI:22296822; contain... |
| Match: At5g28845.1 |
score: 64.31 |
e-value: 1.2e-11 |
Identity: 46.58% |
Span: 219bp (70.6%) |
Frame: 1 |
| At5g28845.1 68412.m03211 gag-pol polyprotein, putative similar to gag-pol polyprotein [Zea mays] GI:22296822; contain... |
| Match: At4g04230.1 |
score: 62.77 |
e-value: 3.4e-11 |
Identity: 43.84% |
Span: 219bp (70.6%) |
Frame: 1 |
| At4g04230.1 68411.m00531 polyprotein, putative similar to gag-pol polyprotein [Zea mays] GI:22296822; contains Pfam p... |
| Match: At4g07600.1 |
score: 62.39 |
e-value: 4.4e-11 |
Identity: 45.9% |
Span: 183bp (59.0%) |
Frame: 1 |
| At4g07600.1 68411.m01074 reverse transcriptase-related similar to Athila ORF 1 [Arabidopsis thaliana] GI:806535 (retr... |
| Match: At2g12920.1 |
score: 56.22 |
e-value: 3.1e-09 |
Identity: 48.39% |
Span: 186bp (60.0%) |
Frame: 1 |
| At2g12920.1 68409.m01280 reverse transcriptase-related similar to GAG-POL precursor [Oryza sativa (japonica cultivar-... |
| Match: At2g06890.1 |
score: 55.84 |
e-value: 4.1e-09 |
Identity: 41.18% |
Span: 204bp (65.8%) |
Frame: 1 |
| At2g06890.1 68409.m00692 gag-pol polyprotein, putative similar to gag-pol polyprotein [Zea mays] GI:22296822; contain... |
| Match: At1g41825.1 |
score: 45.82 |
e-value: 4.2e-06 |
Identity: 40% |
Span: 165bp (53.2%) |
Frame: 1 |
| At1g41825.1 68408.m04416 polyprotein-related low similarity to SP|P04323 Retrovirus-related Pol polyprotein from tran... |
| Match: At4g08100.1 |
score: 38.89 |
e-value: 0.00052 |
Identity: 36.21% |
Span: 174bp (56.1%) |
Frame: 1 |
| At4g08100.1 68411.m01206 gag-pol polyprotein, putative similar to gag-pol polyprotein [Zea mays] GI:22296822; contain... |
| Match: At2g06170.1 |
score: 38.89 |
e-value: 0.00052 |
Identity: 34.62% |
Span: 156bp (50.3%) |
Frame: 1 |
| At2g06170.1 68409.m00603 polyprotein-related low similarity to gag-pol polyprotein [Zea mays] GI:22296822; contains P... |
| Match: At4g32220.1 |
score: 32.34 |
e-value: 0.049 |
Identity: 38.46% |
Span: 117bp (37.7%) |
Frame: 1 |
| At4g32220.1 68411.m04175 RNase H domain-containing protein low similarity to GAG-POL precursor [Oryza sativa (japonic... |
| Match: At2g14640.1 |
score: 31.57 |
e-value: 0.083 |
Identity: 31.91% |
Span: 141bp (45.5%) |
Frame: 1 |
| At2g14640.1 68409.m01486 retroelement pol polyprotein -related |
|
