| genbank/nr [blastx] | Showing best 64 hits recorded |
| Match: gi|1173137|sp|P46279|RPB7_SOYBN |
score: 339.3 |
e-value: 4.6e-92 |
Identity: 93.14% |
Span: 525bp (63.7%) |
Frame: 3 |
| gi|1173137|sp|P46279|RPB7_SOYBN DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE (RNA POLYMERASE II SUBUNIT 5) gi|322... |
| Match: gi|15237831|ref|NP_200726.1| |
score: 327.4 |
e-value: 1.8e-88 |
Identity: 90.75% |
Span: 519bp (63.0%) |
Frame: 3 |
| NRPB7; DNA-directed RNA polymerase/ RNA binding [Arabidopsis thaliana] >gi585917|sp|P38421.1|RPB7_ARATH RecName: Full... |
| Match: gi|24647020|ref|NP_731983.1| |
score: 206.5 |
e-value: 4.6e-52 |
Identity: 54.34% |
Span: 516bp (62.6%) |
Frame: 3 |
| Rpb7 [Drosophila melanogaster] >gi195328827|ref|XP_002031113.1| GM25797 [Drosophila sechellia] >gi|195570746|ref|XP_0... |
| Match: gi|4505947|ref|NP_002687.1| |
score: 202.2 |
e-value: 8.7e-51 |
Identity: 52.33% |
Span: 513bp (62.3%) |
Frame: 3 |
| gi|4505947|ref|NP_002687.1| DNA directed RNA polymerase II polypeptide G; DNA directed RNA polymerase II 19 kda polyp... |
| Match: gi|41054447|ref|NP_955963.1| |
score: 202.2 |
e-value: 8.7e-51 |
Identity: 52.91% |
Span: 513bp (62.3%) |
Frame: 3 |
| gi|41054447|ref|NP_955963.1| polymerase (RNA) II (DNA directed) polypeptide G [Danio rerio] gi|28278826|gb|AAH45299.1... |
| Match: gi|39595528|emb|CAE60566.1| |
score: 200.3 |
e-value: 3.3e-50 |
Identity: 51.18% |
Span: 507bp (61.5%) |
Frame: 3 |
| gi|39595528|emb|CAE60566.1| Hypothetical protein CBG04195 [Caenorhabditis briggsae] |
| Match: gi|17510349|ref|NP_491093.1| |
score: 198.4 |
e-value: 1.3e-49 |
Identity: 51.18% |
Span: 507bp (61.5%) |
Frame: 3 |
| gi|17510349|ref|NP_491093.1| polymerase II (1D600) [Caenorhabditis elegans] gi|7323534|gb|AAF59550.1| Hypothetical pr... |
| Match: gi|31241005|ref|XP_320916.1| |
score: 198 |
e-value: 1.6e-49 |
Identity: 53.8% |
Span: 510bp (61.9%) |
Frame: 3 |
| gi|31241005|ref|XP_320916.1| ENSANGP00000017695 [Anopheles gambiae] gi|21288656|gb|EAA00949.1| ENSANGP00000017695 [An... |
| Match: gi|19114885|ref|NP_593972.1| |
score: 174.9 |
e-value: 1.5e-42 |
Identity: 50% |
Span: 507bp (61.5%) |
Frame: 3 |
| gi|19114885|ref|NP_593972.1| RNA polymerase II subunit rpb7 [Schizosaccharomyces pombe] gi|3334317|sp|O14459|RPB7_SCH... |
| Match: gi|12655858|gb|AAK00627.1| |
score: 172.9 |
e-value: 5.7e-42 |
Identity: 52.63% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|12655858|gb|AAK00627.1| RNA polymerase II subunit 7 [Candida albicans] |
| Match: gi|49078380|ref|XP_402949.1| |
score: 172.2 |
e-value: 9.6e-42 |
Identity: 51.19% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|49078380|ref|XP_402949.1| hypothetical protein UM05334.1 [Ustilago maydis 521] >gi|46101350|gb|EAK86583.1| hypothe... |
| Match: gi|38567178|emb|CAE76471.1| |
score: 157.1 |
e-value: 3.2e-37 |
Identity: 45.83% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|38567178|emb|CAE76471.1| probable DNA-directed RNA polymerase II chain Rpb7 [Neurospora crassa] |
| Match: gi|46108676|ref|XP_381396.1| |
score: 153.7 |
e-value: 3.6e-36 |
Identity: 44.38% |
Span: 516bp (62.6%) |
Frame: 3 |
| gi|46108676|ref|XP_381396.1| hypothetical protein FG01220.1 [Gibberella zeae PH-1] >gi|42544433|gb|EAA67276.1| hypoth... |
| Match: gi|45198920|ref|NP_985949.1| |
score: 146.7 |
e-value: 4.3e-34 |
Identity: 43.35% |
Span: 510bp (61.9%) |
Frame: 3 |
| gi|45198920|ref|NP_985949.1| AFR402Cp [Eremothecium gossypii] >gi|44984949|gb|AAS53773.1| AFR402Cp [Eremothecium goss... |
| Match: gi|23508072|ref|NP_700742.1| |
score: 133.3 |
e-value: 5e-30 |
Identity: 39.41% |
Span: 510bp (61.9%) |
Frame: 3 |
| gi|23508072|ref|NP_700742.1| DNA-directed RNA polymerase II, putative [Plasmodium falciparum 3D7] gi|23495135|gb|AAN3... |
| Match: gi|19114884|ref|NP_593973.1| |
score: 132.9 |
e-value: 6.5e-30 |
Identity: 46.62% |
Span: 390bp (47.3%) |
Frame: 3 |
| gi|19114884|ref|NP_593973.1| DNA-directed RNA polymerase II subunit [Schizosaccharomyces pombe] gi|3395552|emb|CAA201... |
| Match: gi|49087448|ref|XP_405658.1| |
score: 131.7 |
e-value: 1.4e-29 |
Identity: 36.31% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|49087448|ref|XP_405658.1| hypothetical protein AN1521.2 [Aspergillus nidulans FGSC A4] >gi|40744621|gb|EAA63777.1|... |
| Match: gi|6320612|ref|NP_010692.1| |
score: 131.3 |
e-value: 1.9e-29 |
Identity: 38.15% |
Span: 510bp (61.9%) |
Frame: 3 |
| gi|6320612|ref|NP_010692.1| dissociable subunit of RNA polymerase II; Rpb7p [Saccharomyces cerevisiae] gi|464672|sp|P... |
| Match: gi|23481815|gb|EAA17978.1| |
score: 123.2 |
e-value: 5.1e-27 |
Identity: 36.02% |
Span: 510bp (61.9%) |
Frame: 3 |
| gi|23481815|gb|EAA17978.1| RNA polymerase II subunit 7 [Plasmodium yoelii yoelii] |
| Match: gi|38101952|gb|EAA48849.1| |
score: 120.6 |
e-value: 3.3e-26 |
Identity: 35.12% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|38101952|gb|EAA48849.1| hypothetical protein MG00507.4 [Magnaporthe grisea 70-15] |
| Match: gi|19074596|ref|NP_586102.1| |
score: 117.5 |
e-value: 2.8e-25 |
Identity: 36.84% |
Span: 513bp (62.3%) |
Frame: 3 |
| gi|19074596|ref|NP_586102.1| DNA-DIRECTED RNA POLYMERASE II 19kDa SUBUNIT [Encephalitozoon cuniculi] gi|19069238|emb|... |
| Match: gi|32422833|ref|XP_331860.1| |
score: 111.3 |
e-value: 2e-23 |
Identity: 37.28% |
Span: 507bp (61.5%) |
Frame: 3 |
| gi|32422833|ref|XP_331860.1| hypothetical protein [Neurospora crassa] gi|28927243|gb|EAA36198.1| hypothetical protein... |
| Match: gi|13811986|ref|NP_113115.1| |
score: 87.04 |
e-value: 4.1e-16 |
Identity: 31.36% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|13811986|ref|NP_113115.1| RNA polymerase II RPB7 subunit-like protein [Guillardia theta] gi|25312592|pir||C90124 R... |
| Match: gi|45267865|gb|AAS55764.1| |
score: 84.73 |
e-value: 2e-15 |
Identity: 26.86% |
Span: 507bp (61.5%) |
Frame: 3 |
| gi|45267865|gb|AAS55764.1| putative RNA polymerase II fifth largest subunit [Oryza sativa (japonica cultivar-group)] |
| Match: gi|46485829|gb|AAS98454.1| |
score: 79.34 |
e-value: 8.5e-14 |
Identity: 28.21% |
Span: 453bp (55.0%) |
Frame: 3 |
| gi|46485829|gb|AAS98454.1| putative receptor kinase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7447215|pir||C71409 |
score: 77.41 |
e-value: 3.2e-13 |
Identity: 33.33% |
Span: 390bp (47.3%) |
Frame: 3 |
| gi|7447215|pir||C71409 probable RNA polymerase II fifth largest subunit - Arabidopsis thaliana gi|2244822|emb|CAB1024... |
| Match: gi|42566796|ref|NP_193202.2| |
score: 77.41 |
e-value: 3.2e-13 |
Identity: 33.33% |
Span: 390bp (47.3%) |
Frame: 3 |
| NRPE7; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi149944323|gb|ABR46204.1| At4g14660 [Arabidopsis thaliana] |
| Match: gi|11994719|dbj|BAB03035.1| |
score: 72.79 |
e-value: 8e-12 |
Identity: 32.81% |
Span: 378bp (45.9%) |
Frame: 3 |
| RNA polymerase II fifth largest subunit-like protein [Arabidopsis thaliana] |
| Match: gi|18403570|ref|NP_566719.1| |
score: 72.79 |
e-value: 8e-12 |
Identity: 32.81% |
Span: 378bp (45.9%) |
Frame: 3 |
| NRPD7; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21553765|gb|AAM62858.1| RNA polymerase II fifth largest ... |
| Match: gi|11498717|ref|NP_069946.1| |
score: 68.94 |
e-value: 1.2e-10 |
Identity: 25.81% |
Span: 465bp (56.4%) |
Frame: 3 |
| gi|11498717|ref|NP_069946.1| DNA-directed RNA polymerase, subunit E' (rpoE1) [Archaeoglobus fulgidus DSM 4304] gi|744... |
| Match: gi|41719959|ref|ZP_00148798.1| |
score: 65.08 |
e-value: 1.7e-09 |
Identity: 27.1% |
Span: 465bp (56.4%) |
Frame: 3 |
| gi|41719959|ref|ZP_00148798.1| hypothetical protein Mbur049201 [Methanococcoides burtonii DSM 6242] |
| Match: gi|15668573|ref|NP_247371.1| |
score: 62 |
e-value: 1.4e-08 |
Identity: 30.19% |
Span: 318bp (38.6%) |
Frame: 3 |
| gi|15668573|ref|NP_247371.1| DNA-directed RNA polymerase, subunit E' (rpoE1) [Methanococcus jannaschii] gi|2500642|sp... |
| Match: gi|21226698|ref|NP_632620.1| |
score: 60.46 |
e-value: 4.1e-08 |
Identity: 25.16% |
Span: 465bp (56.4%) |
Frame: 3 |
| gi|21226698|ref|NP_632620.1| DNA-directed RNA polymerase subunit E' [Methanosarcina mazei Goe1] gi|20904984|gb|AAM302... |
| Match: gi|20092492|ref|NP_618567.1| |
score: 60.46 |
e-value: 4.1e-08 |
Identity: 25.52% |
Span: 435bp (52.8%) |
Frame: 3 |
| gi|20092492|ref|NP_618567.1| DNA-directed RNA polymerase, subunit E [Methanosarcina acetivorans str. C2A] gi|19917756... |
| Match: gi|27374378|gb|AAO01116.1| |
score: 60.08 |
e-value: 5.3e-08 |
Identity: 49.02% |
Span: 153bp (18.6%) |
Frame: 3 |
| gi|27374378|gb|AAO01116.1| CG31155-PA [Drosophila pseudoobscura] |
| Match: gi|18314155|ref|NP_560822.1| |
score: 58.54 |
e-value: 1.6e-07 |
Identity: 26.06% |
Span: 423bp (51.3%) |
Frame: 3 |
| gi|18314155|ref|NP_560822.1| DNA-directed RNA polymerase subunit E' (rpoE1) [Pyrobaculum aerophilum] gi|18161744|gb|A... |
| Match: gi|48840174|ref|ZP_00297102.1| |
score: 58.54 |
e-value: 1.6e-07 |
Identity: 24.83% |
Span: 435bp (52.8%) |
Frame: 3 |
| gi|48840174|ref|ZP_00297102.1| COG1095: DNA-directed RNA polymerase, subunit E' [Methanosarcina barkeri str. fusaro] |
| Match: gi|20094887|ref|NP_614734.1| |
score: 54.3 |
e-value: 2.9e-06 |
Identity: 24.05% |
Span: 456bp (55.3%) |
Frame: 3 |
| gi|20094887|ref|NP_614734.1| DNA-directed RNA polymerase subunit E' [Methanopyrus kandleri AV19] gi|19888120|gb|AAM02... |
| Match: gi|14591652|ref|NP_143736.1| |
score: 53.91 |
e-value: 3.8e-06 |
Identity: 28.45% |
Span: 348bp (42.2%) |
Frame: 3 |
| gi|14591652|ref|NP_143736.1| DNA-directed RNA polymerase subunit E [Pyrococcus horikoshii] gi|7447210|pir||B71205 pro... |
| Match: gi|48853226|ref|ZP_00307406.1| |
score: 53.53 |
e-value: 5e-06 |
Identity: 23.88% |
Span: 402bp (48.8%) |
Frame: 3 |
| gi|48853226|ref|ZP_00307406.1| COG1095: DNA-directed RNA polymerase, subunit E' [Ferroplasma acidarmanus] |
| Match: gi|30682881|ref|NP_193188.2| |
score: 52.37 |
e-value: 1.1e-05 |
Identity: 27.83% |
Span: 315bp (38.2%) |
Frame: 3 |
| DNA-directed RNA polymerase II-related [Arabidopsis thaliana] >gi30682886|ref|NP_849385.1| DNA-directed RNA polymeras... |
| Match: gi|48477938|ref|YP_023644.1| |
score: 52.37 |
e-value: 1.1e-05 |
Identity: 27.63% |
Span: 426bp (51.7%) |
Frame: 3 |
| gi|48477938|ref|YP_023644.1| DNA-directed RNA polymerase subunit E' [Picrophilus torridus DSM 9790] >gi|48430586|gb|A... |
| Match: gi|47187492|emb|CAG14887.1| |
score: 52.37 |
e-value: 1.1e-05 |
Identity: 55.26% |
Span: 114bp (13.8%) |
Frame: 3 |
| gi|47187492|emb|CAG14887.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|15897347|ref|NP_341952.1| |
score: 52.37 |
e-value: 1.1e-05 |
Identity: 24.83% |
Span: 432bp (52.4%) |
Frame: 3 |
| gi|15897347|ref|NP_341952.1| DNA-directed RNA polymerase, subunit E' (rpoE1) [Sulfolobus solfataricus] gi|25312585|pi... |
| Match: gi|14600570|ref|NP_147087.1| |
score: 51.99 |
e-value: 1.5e-05 |
Identity: 23.56% |
Span: 504bp (61.2%) |
Frame: 3 |
| gi|14600570|ref|NP_147087.1| DNA-directed RNA polymerase subunit E' [Aeropyrum pernix] gi|7447214|pir||A72784 probabl... |
| Match: gi|45358003|ref|NP_987560.1| |
score: 50.45 |
e-value: 4.2e-05 |
Identity: 24.32% |
Span: 441bp (53.5%) |
Frame: 3 |
| gi|45358003|ref|NP_987560.1| DNA-directed RNA polymerase subunit E' [Methanococcus maripaludis S2] >gi|44920760|emb|C... |
| Match: gi|28828433|gb|AAO51051.1| |
score: 50.06 |
e-value: 5.5e-05 |
Identity: 28.3% |
Span: 300bp (36.4%) |
Frame: 3 |
| gi|28828433|gb|AAO51051.1| hypothetical protein [Dictyostelium discoideum] |
| Match: gi|47209336|emb|CAF94683.1| |
score: 49.68 |
e-value: 7.2e-05 |
Identity: 51.22% |
Span: 123bp (14.9%) |
Frame: 3 |
| gi|47209336|emb|CAF94683.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|19112860|ref|NP_596068.1| |
score: 49.29 |
e-value: 9.4e-05 |
Identity: 23.85% |
Span: 327bp (39.7%) |
Frame: 3 |
| gi|19112860|ref|NP_596068.1| DNA directed RNA polymerase III subunit [Schizosaccharomyces pombe] gi|7490488|pir||T401... |
| Match: gi|41615160|ref|NP_963658.1| |
score: 48.91 |
e-value: 0.00012 |
Identity: 24.2% |
Span: 453bp (55.0%) |
Frame: 3 |
| gi|41615160|ref|NP_963658.1| NEQ370 [Nanoarchaeum equitans Kin4-M] gi|40068884|gb|AAR39219.1| NEQ370 [Nanoarchaeum eq... |
| Match: gi|15678292|ref|NP_275407.1| |
score: 48.91 |
e-value: 0.00012 |
Identity: 23.13% |
Span: 441bp (53.5%) |
Frame: 3 |
| gi|15678292|ref|NP_275407.1| DNA-dependent RNA polymerase, subunit E' [Methanothermobacter thermautotrophicus] gi|744... |
| Match: gi|7485116|pir||E71407 |
score: 48.52 |
e-value: 0.00016 |
Identity: 27.52% |
Span: 297bp (36.0%) |
Frame: 3 |
| gi|7485116|pir||E71407 hypothetical protein - Arabidopsis thaliana gi|2244808|emb|CAB10231.1| hypothetical protein [A... |
| Match: gi|49072458|ref|XP_400518.1| |
score: 48.14 |
e-value: 0.00021 |
Identity: 26.56% |
Span: 357bp (43.3%) |
Frame: 3 |
| gi|49072458|ref|XP_400518.1| hypothetical protein UM02903.1 [Ustilago maydis 521] >gi|46098719|gb|EAK83952.1| hypothe... |
| Match: gi|13541317|ref|NP_111005.1| |
score: 46.98 |
e-value: 0.00047 |
Identity: 25.55% |
Span: 411bp (49.9%) |
Frame: 3 |
| gi|13541317|ref|NP_111005.1| DNA-directed RNA polymerase subunit E' [Thermoplasma volcanium] |
| Match: gi|14324700|dbj|BAB59627.1| |
score: 46.98 |
e-value: 0.00047 |
Identity: 25.55% |
Span: 411bp (49.9%) |
Frame: 3 |
| gi|14324700|dbj|BAB59627.1| DNA-directed RNA polymerase E' [Thermoplasma volcanium] |
| Match: gi|49087254|ref|XP_405584.1| |
score: 46.98 |
e-value: 0.00047 |
Identity: 26.4% |
Span: 351bp (42.6%) |
Frame: 3 |
| gi|49087254|ref|XP_405584.1| hypothetical protein AN1447.2 [Aspergillus nidulans FGSC A4] >gi|40745421|gb|EAA64577.1|... |
| Match: gi|15790905|ref|NP_280729.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 22.22% |
Span: 456bp (55.3%) |
Frame: 3 |
| gi|15790905|ref|NP_280729.1| DNA-directed RNA polymerase subunit E'; RpoE' [Halobacterium sp. NRC-1] gi|25312587|pir|... |
| Match: gi|34901638|ref|NP_912165.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 28.12% |
Span: 288bp (35.0%) |
Frame: 3 |
| gi|34901638|ref|NP_912165.1| putative DNA-directed RNA polymerase III subunit 22.9 kDa polypeptide [Oryza sativa (jap... |
| Match: gi|42571371|ref|NP_973776.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 32.18% |
Span: 261bp (31.7%) |
Frame: 3 |
| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] |
| Match: gi|18976628|ref|NP_577985.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 25.86% |
Span: 348bp (42.2%) |
Frame: 3 |
| gi|18976628|ref|NP_577985.1| DNA-directed RNA polymerase, subunit e' [Pyrococcus furiosus DSM 3638] gi|18892197|gb|AA... |
| Match: gi|15222202|ref|NP_172164.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 32.18% |
Span: 261bp (31.7%) |
Frame: 3 |
| RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] >gi7523702|gb|AAF63141.1|AC011001_11 ... |
| Match: gi|17566938|ref|NP_505625.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 26.12% |
Span: 360bp (43.7%) |
Frame: 3 |
| gi|17566938|ref|NP_505625.1| RNA polymerase (5K686) [Caenorhabditis elegans] gi|7511361|pir||T28049 hypothetical prot... |
| Match: gi|23508254|ref|NP_700923.1| |
score: 43.9 |
e-value: 0.004 |
Identity: 25.3% |
Span: 447bp (54.2%) |
Frame: 3 |
| gi|23508254|ref|NP_700923.1| hypothetical protein, conserved [Plasmodium falciparum 3D7] gi|23495984|gb|AAN35647.1| h... |
| Match: gi|46437521|gb|EAK96866.1| |
score: 42.74 |
e-value: 0.009 |
Identity: 23.97% |
Span: 363bp (44.1%) |
Frame: 3 |
| gi|46437521|gb|EAK96866.1| hypothetical protein CaO19.443 [Candida albicans SC5314] >gi|46437573|gb|EAK96917.1| hypot... |
|
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At5g59180.1 |
score: 327.4 |
e-value: 5e-90 |
Identity: 90.75% |
Span: 519bp (63.0%) |
Frame: 3 |
| At5g59180.1 68412.m06712 RNA polymerase II |
| Match: At4g14660.1 |
score: 77.41 |
e-value: 9e-15 |
Identity: 33.33% |
Span: 390bp (47.3%) |
Frame: 3 |
| At4g14660.1 68411.m02042 RNA polymerase II fifth largest subunit like protein |
| Match: At3g22900.1 |
score: 72.79 |
e-value: 2.2e-13 |
Identity: 32.81% |
Span: 378bp (45.9%) |
Frame: 3 |
| At3g22900.1 68410.m02624 expressed protein similar to DNA-directed RNA polymerase II 19 KD polypeptide (subunit 5) GB... |
| Match: At4g14520.2 |
score: 52.37 |
e-value: 3.1e-07 |
Identity: 27.83% |
Span: 315bp (38.2%) |
Frame: 3 |
| At4g14520.2 68411.m05458 expressed protein |
| Match: At4g14520.1 |
score: 52.37 |
e-value: 3.1e-07 |
Identity: 27.83% |
Span: 315bp (38.2%) |
Frame: 3 |
| At4g14520.1 68411.m05457 expressed protein |
| Match: At1g06790.1 |
score: 45.44 |
e-value: 3.8e-05 |
Identity: 32.18% |
Span: 261bp (31.7%) |
Frame: 3 |
| At1g06790.1 68408.m00656 RNA polymerase -related similar to DNA directed RNA polymerase III subunit GB:CAA21883 GI:38... |
| Match: At1g06790.2 |
score: 45.44 |
e-value: 3.8e-05 |
Identity: 32.18% |
Span: 261bp (31.7%) |
Frame: 3 |
| At1g06790.2 68414.m00722 RNA polymerase Rpb7 N-terminal domain-containing protein similar to SP|P35718 DNA-directed R... |
|
