| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|40644190|emb|CAC95126.1| |
score: 78.95 |
e-value: 1.7e-14 |
Identity: 33.99% |
Span: 459bp (52.6%) |
Frame: 1 |
| gi|40644190|emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] |
| Match: gi|25301673|pir||F96509 |
score: 73.17 |
e-value: 1.5e-17 |
Identity: 46.15% |
Span: 270bp (30.9%) |
Frame: 1 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|7444421|pir||A71444 |
score: 72.4 |
e-value: 4.6e-15 |
Identity: 46.15% |
Span: 270bp (30.9%) |
Frame: 1 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|25411082|pir||B84458 |
score: 72.02 |
e-value: 2.6e-18 |
Identity: 40.66% |
Span: 273bp (31.3%) |
Frame: 1 |
| gi|25411082|pir||B84458 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4587602|gb|AAD2583... |
| Match: gi|25301682|pir||G86301 |
score: 70.86 |
e-value: 5.6e-15 |
Identity: 44.58% |
Span: 249bp (28.5%) |
Frame: 1 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|38605755|emb|CAE04319.3| |
score: 70.48 |
e-value: 1.3e-15 |
Identity: 47.06% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|38605755|emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|48210051|gb|AAT40550.1| |
score: 70.48 |
e-value: 1.5e-12 |
Identity: 41.76% |
Span: 273bp (31.3%) |
Frame: 1 |
| gi|48210051|gb|AAT40550.1| putative receptor kinase [Solanum demissum] |
| Match: gi|37534758|ref|NP_921681.1| |
score: 70.09 |
e-value: 2.2e-14 |
Identity: 47.06% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|37534758|ref|NP_921681.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|31432318|gb|AAP... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 68.94 |
e-value: 8.2e-14 |
Identity: 30.07% |
Span: 459bp (52.6%) |
Frame: 1 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|32489196|emb|CAE04381.1| |
score: 68.94 |
e-value: 6.8e-13 |
Identity: 33.55% |
Span: 456bp (52.2%) |
Frame: 1 |
| gi|32489196|emb|CAE04381.1| OSJNBa0027G07.23 [Oryza sativa (japonica cultivar-group)] gi|38347090|emb|CAE02562.2| OSJ... |
| Match: gi|7444451|pir||T10728 |
score: 68.94 |
e-value: 2.5e-17 |
Identity: 45.88% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|31249765|gb|AAP46257.1| |
score: 68.55 |
e-value: 7.2e-16 |
Identity: 43.96% |
Span: 273bp (31.3%) |
Frame: 1 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711922|gb|ABF99717.1| retrotransposon protein, putative, unc... |
| Match: gi|38567922|emb|CAE75905.1| |
score: 68.17 |
e-value: 1.4e-13 |
Identity: 30.07% |
Span: 459bp (52.6%) |
Frame: 1 |
| gi|38567922|emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37530416|ref|NP_919510.1| |
score: 67.78 |
e-value: 6e-15 |
Identity: 31.29% |
Span: 471bp (54.0%) |
Frame: 1 |
| gi|37530416|ref|NP_919510.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|18542917|gb|... |
| Match: gi|40714683|gb|AAR88589.1| |
score: 67.4 |
e-value: 8.6e-13 |
Identity: 44.71% |
Span: 255bp (29.2%) |
Frame: 1 |
| putative copia-like retrotransposon protein [Oryza sativa Japonica Group] |
| Match: gi|18378607|gb|AAL68641.1| |
score: 67.01 |
e-value: 2e-14 |
Identity: 38.46% |
Span: 273bp (31.3%) |
Frame: 1 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|47824974|gb|AAT38747.1| |
score: 67.01 |
e-value: 3e-13 |
Identity: 39.36% |
Span: 282bp (32.3%) |
Frame: 1 |
| gi|47824974|gb|AAT38747.1| putative polyprotein [Solanum demissum] |
| Match: gi|48843818|gb|AAT47077.1| |
score: 66.63 |
e-value: 1.3e-14 |
Identity: 42.86% |
Span: 273bp (31.3%) |
Frame: 1 |
| gi|48843818|gb|AAT47077.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34907752|ref|NP_915223.1| |
score: 66.63 |
e-value: 7e-17 |
Identity: 42.35% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|16905206|gb|AAL31076.1| |
score: 66.63 |
e-value: 2.8e-14 |
Identity: 44.71% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|16905206|gb|AAL31076.1| putaive copia-like retrotransposon polyprotein, 5'-partial [Oryza sativa] |
| Match: gi|37532886|ref|NP_920745.1| |
score: 66.63 |
e-value: 2.7e-14 |
Identity: 44.71% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|37532886|ref|NP_920745.1| putative copia-like retrotransposon polyprotein [Oryza sativa (japonica cultivar-group)]... |
| Match: gi|34908452|ref|NP_915573.1| |
score: 66.63 |
e-value: 3.4e-13 |
Identity: 45.88% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|34908452|ref|NP_915573.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|15290020|dbj|BA... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 66.63 |
e-value: 5.1e-13 |
Identity: 29.41% |
Span: 459bp (52.6%) |
Frame: 1 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|34902630|ref|NP_912661.1| |
score: 66.63 |
e-value: 3.5e-13 |
Identity: 45.88% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|34902630|ref|NP_912661.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|22773264|gb|AAN... |
| Match: gi|37535486|ref|NP_922045.1| |
score: 65.08 |
e-value: 1.1e-12 |
Identity: 29.41% |
Span: 459bp (52.6%) |
Frame: 1 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|25301692|pir||H84467 |
score: 64.31 |
e-value: 7.4e-13 |
Identity: 37.78% |
Span: 270bp (30.9%) |
Frame: 1 |
| gi|25301692|pir||H84467 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4914361|gb|AAD3289... |
| Match: gi|38345658|emb|CAE04422.2| |
score: 63.54 |
e-value: 1.9e-12 |
Identity: 40% |
Span: 270bp (30.9%) |
Frame: 1 |
| gi|38345658|emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34910624|ref|NP_916659.1| |
score: 63.16 |
e-value: 3.9e-13 |
Identity: 38.46% |
Span: 273bp (31.3%) |
Frame: 1 |
| gi|34910624|ref|NP_916659.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|15623989|dbj... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 62.39 |
e-value: 1.4e-13 |
Identity: 28.76% |
Span: 459bp (52.6%) |
Frame: 1 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7487468|pir||T01810 |
score: 59.69 |
e-value: 2.2e-13 |
Identity: 37.93% |
Span: 261bp (29.9%) |
Frame: 1 |
| gi|7487468|pir||T01810 hypothetical protein T27D20.7 - Arabidopsis thaliana gi|3377848|gb|AAC28230.1| contains simila... |
| Match: gi|25411300|pir||F84485 |
score: 59.31 |
e-value: 4.1e-17 |
Identity: 36.78% |
Span: 261bp (29.9%) |
Frame: 1 |
| gi|25411300|pir||F84485 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4309765|gb|AAD1553... |
| Match: gi|7488558|pir||T14517 |
score: 58.92 |
e-value: 1.1e-14 |
Identity: 34.88% |
Span: 258bp (29.6%) |
Frame: 1 |
| gi|7488558|pir||T14517 hypothetical protein 1 - wild cabbage transposon Melmoth gi|2462935|emb|CAA72989.1| unnamed pr... |
| Match: gi|7444442|pir||T02087 |
score: 58.92 |
e-value: 8.2e-13 |
Identity: 39.74% |
Span: 234bp (26.8%) |
Frame: 1 |
| gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retr... |
| Match: gi|21741247|emb|CAD41731.1| |
score: 58.92 |
e-value: 3e-13 |
Identity: 38.82% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|21741247|emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346593|emb|CAE04657.2| |
score: 58.54 |
e-value: 4e-13 |
Identity: 38.82% |
Span: 255bp (29.2%) |
Frame: 1 |
| gi|38346593|emb|CAE04657.2| OSJNBa0061G20.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|39546217|emb|CAE04466.3| |
score: 55.45 |
e-value: 1.1e-12 |
Identity: 57.14% |
Span: 126bp (14.4%) |
Frame: 1 |
| gi|39546217|emb|CAE04466.3| OSJNBa0029L02.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37530800|ref|NP_919702.1| |
score: 54.68 |
e-value: 3.4e-12 |
Identity: 36.59% |
Span: 246bp (28.2%) |
Frame: 1 |
| gi|37530800|ref|NP_919702.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|20514806|gb|AAM2325... |
| Match: gi|13991169|gb|AAK51235.1| |
score: 53.91 |
e-value: 2.9e-12 |
Identity: 42.67% |
Span: 225bp (25.8%) |
Frame: 1 |
| gi|13991169|gb|AAK51235.1| polyprotein [Arabidopsis thaliana] |
| Match: gi|39546217|emb|CAE04466.3| |
score: 40.43 |
e-value: 1.1e-12 |
Identity: 48.39% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|39546217|emb|CAE04466.3| OSJNBa0029L02.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21741247|emb|CAD41731.1| |
score: 38.89 |
e-value: 3e-13 |
Identity: 48.39% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|21741247|emb|CAD41731.1| OSJNBb0034I13.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346593|emb|CAE04657.2| |
score: 38.89 |
e-value: 4e-13 |
Identity: 48.39% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|38346593|emb|CAE04657.2| OSJNBa0061G20.13 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37530800|ref|NP_919702.1| |
score: 37.35 |
e-value: 3.4e-12 |
Identity: 51.61% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|37530800|ref|NP_919702.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|20514806|gb|AAM2325... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 36.58 |
e-value: 1.4e-13 |
Identity: 43.59% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|48843818|gb|AAT47077.1| |
score: 35.81 |
e-value: 1.3e-14 |
Identity: 51.72% |
Span: 87bp (10.0%) |
Frame: 2 |
| gi|48843818|gb|AAT47077.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31249765|gb|AAP46257.1| |
score: 35.81 |
e-value: 7.2e-16 |
Identity: 51.72% |
Span: 87bp (10.0%) |
Frame: 2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711922|gb|ABF99717.1| retrotransposon protein, putative, unc... |
| Match: gi|37530416|ref|NP_919510.1| |
score: 35.81 |
e-value: 6e-15 |
Identity: 51.72% |
Span: 87bp (10.0%) |
Frame: 2 |
| gi|37530416|ref|NP_919510.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|18542917|gb|... |
| Match: gi|38605755|emb|CAE04319.3| |
score: 35.42 |
e-value: 1.3e-15 |
Identity: 41.27% |
Span: 159bp (18.2%) |
Frame: 2 |
| gi|38605755|emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34910624|ref|NP_916659.1| |
score: 34.27 |
e-value: 3.9e-13 |
Identity: 46.67% |
Span: 90bp (10.3%) |
Frame: 2 |
| gi|34910624|ref|NP_916659.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|15623989|dbj... |
| Match: gi|34907752|ref|NP_915223.1| |
score: 33.11 |
e-value: 7e-17 |
Identity: 38.1% |
Span: 159bp (18.2%) |
Frame: 2 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|25411300|pir||F84485 |
score: 32.34 |
e-value: 4.1e-17 |
Identity: 46.43% |
Span: 84bp (9.6%) |
Frame: 2 |
| gi|25411300|pir||F84485 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4309765|gb|AAD1553... |
| Match: gi|7444451|pir||T10728 |
score: 32.34 |
e-value: 2.5e-17 |
Identity: 38.1% |
Span: 159bp (18.2%) |
Frame: 2 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|25411300|pir||F84485 |
score: 31.96 |
e-value: 4.1e-17 |
Identity: 51.22% |
Span: 123bp (14.1%) |
Frame: 2 |
| gi|25411300|pir||F84485 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4309765|gb|AAD1553... |
| Match: gi|38345658|emb|CAE04422.2| |
score: 31.57 |
e-value: 1.9e-12 |
Identity: 41.67% |
Span: 108bp (12.4%) |
Frame: 2 |
| gi|38345658|emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37534758|ref|NP_921681.1| |
score: 31.57 |
e-value: 2.2e-14 |
Identity: 32.88% |
Span: 189bp (21.6%) |
Frame: 2 |
| gi|37534758|ref|NP_921681.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|31432318|gb|AAP... |
| Match: gi|7444421|pir||A71444 |
score: 31.57 |
e-value: 4.6e-15 |
Identity: 30.77% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|25411082|pir||B84458 |
score: 31.19 |
e-value: 2.6e-18 |
Identity: 40% |
Span: 120bp (13.7%) |
Frame: 2 |
| gi|25411082|pir||B84458 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4587602|gb|AAD2583... |
| Match: gi|7487468|pir||T01810 |
score: 31.19 |
e-value: 2.2e-13 |
Identity: 51.22% |
Span: 123bp (14.1%) |
Frame: 2 |
| gi|7487468|pir||T01810 hypothetical protein T27D20.7 - Arabidopsis thaliana gi|3377848|gb|AAC28230.1| contains simila... |
| Match: gi|25301673|pir||F96509 |
score: 31.19 |
e-value: 1.5e-17 |
Identity: 30.77% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|18378607|gb|AAL68641.1| |
score: 31.19 |
e-value: 2e-14 |
Identity: 35.9% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30103001|gb|AAP21414.1| |
score: 30.8 |
e-value: 8.2e-14 |
Identity: 33.33% |
Span: 117bp (13.4%) |
Frame: 2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|37535486|ref|NP_922045.1| |
score: 30.8 |
e-value: 1.1e-12 |
Identity: 35.9% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|25301692|pir||H84467 |
score: 30.8 |
e-value: 7.4e-13 |
Identity: 53.57% |
Span: 84bp (9.6%) |
Frame: 2 |
| gi|25301692|pir||H84467 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4914361|gb|AAD3289... |
| Match: gi|47824974|gb|AAT38747.1| |
score: 30.8 |
e-value: 3e-13 |
Identity: 33.33% |
Span: 162bp (18.6%) |
Frame: 2 |
| gi|47824974|gb|AAT38747.1| putative polyprotein [Solanum demissum] |
| Match: gi|38567922|emb|CAE75905.1| |
score: 30.8 |
e-value: 1.4e-13 |
Identity: 35.9% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|38567922|emb|CAE75905.1| OSJNBa0088I22.18 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914532|ref|NP_918613.1| |
score: 30.42 |
e-value: 5.1e-13 |
Identity: 33.33% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|7488558|pir||T14517 |
score: 30.42 |
e-value: 1.1e-14 |
Identity: 30.77% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|7488558|pir||T14517 hypothetical protein 1 - wild cabbage transposon Melmoth gi|2462935|emb|CAA72989.1| unnamed pr... |
| Match: gi|7444451|pir||T10728 |
score: 30.03 |
e-value: 2.5e-17 |
Identity: 43.75% |
Span: 96bp (11.0%) |
Frame: 2 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|34907752|ref|NP_915223.1| |
score: 30.03 |
e-value: 7e-17 |
Identity: 43.75% |
Span: 96bp (11.0%) |
Frame: 2 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|13991169|gb|AAK51235.1| |
score: 30.03 |
e-value: 2.9e-12 |
Identity: 43.75% |
Span: 96bp (11.0%) |
Frame: 2 |
| gi|13991169|gb|AAK51235.1| polyprotein [Arabidopsis thaliana] |
| Match: gi|40714683|gb|AAR88589.1| |
score: 28.88 |
e-value: 8.6e-13 |
Identity: 55% |
Span: 60bp (6.9%) |
Frame: 2 |
| putative copia-like retrotransposon protein [Oryza sativa Japonica Group] |
| Match: gi|7444442|pir||T02087 |
score: 28.49 |
e-value: 8.2e-13 |
Identity: 44.83% |
Span: 87bp (10.0%) |
Frame: 2 |
| gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retr... |
| Match: gi|37532886|ref|NP_920745.1| |
score: 27.72 |
e-value: 2.7e-14 |
Identity: 41.94% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|37532886|ref|NP_920745.1| putative copia-like retrotransposon polyprotein [Oryza sativa (japonica cultivar-group)]... |
| Match: gi|16905206|gb|AAL31076.1| |
score: 27.72 |
e-value: 2.8e-14 |
Identity: 41.94% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|16905206|gb|AAL31076.1| putaive copia-like retrotransposon polyprotein, 5'-partial [Oryza sativa] |
| Match: gi|25411082|pir||B84458 |
score: 27.72 |
e-value: 2.6e-18 |
Identity: 42.86% |
Span: 84bp (9.6%) |
Frame: 2 |
| gi|25411082|pir||B84458 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4587602|gb|AAD2583... |
| Match: gi|32489196|emb|CAE04381.1| |
score: 27.72 |
e-value: 6.8e-13 |
Identity: 45.16% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|32489196|emb|CAE04381.1| OSJNBa0027G07.23 [Oryza sativa (japonica cultivar-group)] gi|38347090|emb|CAE02562.2| OSJ... |
| Match: gi|13991169|gb|AAK51235.1| |
score: 27.34 |
e-value: 2.9e-12 |
Identity: 50% |
Span: 60bp (6.9%) |
Frame: 2 |
| gi|13991169|gb|AAK51235.1| polyprotein [Arabidopsis thaliana] |
| Match: gi|7487468|pir||T01810 |
score: 26.95 |
e-value: 2.2e-13 |
Identity: 42.31% |
Span: 78bp (8.9%) |
Frame: 3 |
| gi|7487468|pir||T01810 hypothetical protein T27D20.7 - Arabidopsis thaliana gi|3377848|gb|AAC28230.1| contains simila... |
| Match: gi|7488558|pir||T14517 |
score: 26.56 |
e-value: 1.1e-14 |
Identity: 53.57% |
Span: 84bp (9.6%) |
Frame: 2 |
| gi|7488558|pir||T14517 hypothetical protein 1 - wild cabbage transposon Melmoth gi|2462935|emb|CAA72989.1| unnamed pr... |
| Match: gi|16905206|gb|AAL31076.1| |
score: 26.56 |
e-value: 2.8e-14 |
Identity: 37.25% |
Span: 123bp (14.1%) |
Frame: 2 |
| gi|16905206|gb|AAL31076.1| putaive copia-like retrotransposon polyprotein, 5'-partial [Oryza sativa] |
| Match: gi|37532886|ref|NP_920745.1| |
score: 26.56 |
e-value: 2.7e-14 |
Identity: 37.25% |
Span: 123bp (14.1%) |
Frame: 2 |
| gi|37532886|ref|NP_920745.1| putative copia-like retrotransposon polyprotein [Oryza sativa (japonica cultivar-group)]... |
| Match: gi|34908452|ref|NP_915573.1| |
score: 26.56 |
e-value: 3.4e-13 |
Identity: 32.69% |
Span: 126bp (14.4%) |
Frame: 2 |
| gi|34908452|ref|NP_915573.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|15290020|dbj|BA... |
| Match: gi|34902630|ref|NP_912661.1| |
score: 26.56 |
e-value: 3.5e-13 |
Identity: 32.69% |
Span: 126bp (14.4%) |
Frame: 2 |
| gi|34902630|ref|NP_912661.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|22773264|gb|AAN... |
| Match: gi|25301682|pir||G86301 |
score: 26.56 |
e-value: 5.6e-15 |
Identity: 35.14% |
Span: 111bp (12.7%) |
Frame: 2 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|25301673|pir||F96509 |
score: 26.18 |
e-value: 1.5e-17 |
Identity: 44% |
Span: 75bp (8.6%) |
Frame: 3 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|25411300|pir||F84485 |
score: 26.18 |
e-value: 4.1e-17 |
Identity: 42.31% |
Span: 78bp (8.9%) |
Frame: 3 |
| gi|25411300|pir||F84485 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4309765|gb|AAD1553... |
| Match: gi|7444442|pir||T02087 |
score: 26.18 |
e-value: 8.2e-13 |
Identity: 45% |
Span: 60bp (6.9%) |
Frame: 2 |
| gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retr... |
| Match: gi|25301682|pir||G86301 |
score: 25.79 |
e-value: 5.6e-15 |
Identity: 52% |
Span: 60bp (6.9%) |
Frame: 2 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|7488558|pir||T14517 |
score: 25.41 |
e-value: 1.1e-14 |
Identity: 37.5% |
Span: 72bp (8.2%) |
Frame: 3 |
| gi|7488558|pir||T14517 hypothetical protein 1 - wild cabbage transposon Melmoth gi|2462935|emb|CAA72989.1| unnamed pr... |
| Match: gi|48210051|gb|AAT40550.1| |
score: 25.02 |
e-value: 1.5e-12 |
Identity: 45.45% |
Span: 66bp (7.6%) |
Frame: 2 |
| gi|48210051|gb|AAT40550.1| putative receptor kinase [Solanum demissum] |
| Match: gi|34908452|ref|NP_915573.1| |
score: 23.87 |
e-value: 3.4e-13 |
Identity: 38.71% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|34908452|ref|NP_915573.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|15290020|dbj|BA... |
| Match: gi|34902630|ref|NP_912661.1| |
score: 23.87 |
e-value: 3.5e-13 |
Identity: 38.71% |
Span: 93bp (10.7%) |
Frame: 2 |
| gi|34902630|ref|NP_912661.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|22773264|gb|AAN... |
| Match: gi|40644190|emb|CAC95126.1| |
score: 23.1 |
e-value: 1.7e-14 |
Identity: 28.21% |
Span: 117bp (13.4%) |
Frame: 2 |
| gi|40644190|emb|CAC95126.1| gag-pol polyprotein [Populus deltoides] |
| Match: gi|18378607|gb|AAL68641.1| |
score: 23.1 |
e-value: 2e-14 |
Identity: 39.02% |
Span: 123bp (14.1%) |
Frame: 2 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411082|pir||B84458 |
score: 23.1 |
e-value: 2.6e-18 |
Identity: 46.67% |
Span: 45bp (5.2%) |
Frame: 3 |
| gi|25411082|pir||B84458 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4587602|gb|AAD2583... |
| Match: gi|31249765|gb|AAP46257.1| |
score: 21.94 |
e-value: 7.2e-16 |
Identity: 52.63% |
Span: 57bp (6.5%) |
Frame: 2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711922|gb|ABF99717.1| retrotransposon protein, putative, unc... |
| Match: gi|13991169|gb|AAK51235.1| |
score: 21.56 |
e-value: 2.9e-12 |
Identity: 41.67% |
Span: 72bp (8.2%) |
Frame: 3 |
| gi|13991169|gb|AAK51235.1| polyprotein [Arabidopsis thaliana] |
| Match: gi|37530800|ref|NP_919702.1| |
score: 21.56 |
e-value: 3.4e-12 |
Identity: 42.31% |
Span: 78bp (8.9%) |
Frame: 2 |
| gi|37530800|ref|NP_919702.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|20514806|gb|AAM2325... |
| Match: gi|7444442|pir||T02087 |
score: 21.17 |
e-value: 8.2e-13 |
Identity: 37.04% |
Span: 81bp (9.3%) |
Frame: 3 |
| gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retr... |
| Match: gi|25301692|pir||H84467 |
score: 20.79 |
e-value: 7.4e-13 |
Identity: 47.37% |
Span: 57bp (6.5%) |
Frame: 2 |
| gi|25301692|pir||H84467 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4914361|gb|AAD3289... |
| Match: gi|25301673|pir||F96509 |
score: 20.79 |
e-value: 1.5e-17 |
Identity: 58.33% |
Span: 36bp (4.1%) |
Frame: 2 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
|
| 138 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At4g23160.1 |
score: 65.08 |
e-value: 5e-11 |
Identity: 58.14% |
Span: 129bp (14.8%) |
Frame: 1 |
| At4g23160.1 68411.m03051 hypothetical protein copia-like retrotransposon Hopscotch polyprotein, Zea mays |
| Match: AtMg00820 |
score: 54.68 |
e-value: 3.1e-09 |
Identity: 57.14% |
Span: 126bp (14.4%) |
Frame: 1 |
| AtMg00820 orf170 \N |
| Match: AtMg00820 |
score: 24.25 |
e-value: 3.1e-09 |
Identity: 34.29% |
Span: 105bp (12.0%) |
Frame: 2 |
| AtMg00820 orf170 \N |
|
