| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|37530894|ref|NP_919749.1| |
score: 149.1 |
e-value: 1.7e-35 |
Identity: 67.01% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|37530894|ref|NP_919749.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|18642681|gb|AAK... |
| Match: gi|13876509|gb|AAK43485.1| |
score: 146 |
e-value: 1.5e-34 |
Identity: 66.33% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|13876509|gb|AAK43485.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|7444442|pir||T02087 |
score: 146 |
e-value: 1.5e-34 |
Identity: 67.01% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retr... |
| Match: gi|7485134|pir||E71436 |
score: 145.6 |
e-value: 1.9e-34 |
Identity: 66.33% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|7485134|pir||E71436 hypothetical protein - Arabidopsis thaliana |
| Match: gi|25301691|pir||B85188 |
score: 145.6 |
e-value: 1.9e-34 |
Identity: 66.33% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|25301691|pir||B85188 retrotransposon like protein [imported] - Arabidopsis thaliana gi|5302802|emb|CAB46043.1| ret... |
| Match: gi|40714683|gb|AAR88589.1| |
score: 145.6 |
e-value: 1.9e-34 |
Identity: 65.66% |
Span: 297bp (64.0%) |
Frame: 3 |
| putative copia-like retrotransposon protein [Oryza sativa Japonica Group] |
| Match: gi|34908452|ref|NP_915573.1| |
score: 144.4 |
e-value: 4.3e-34 |
Identity: 64.95% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|34908452|ref|NP_915573.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|15290020|dbj|BA... |
| Match: gi|34902630|ref|NP_912661.1| |
score: 144.4 |
e-value: 4.3e-34 |
Identity: 64.95% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|34902630|ref|NP_912661.1| Putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|22773264|gb|AAN... |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 144.1 |
e-value: 5.6e-34 |
Identity: 63.27% |
Span: 294bp (63.4%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|9802525|gb|AAF99727.1| |
score: 143.7 |
e-value: 7.3e-34 |
Identity: 65.31% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|9802525|gb|AAF99727.1| F17L21.7 [Arabidopsis thaliana] |
| Match: gi|18254413|gb|AAL66754.1| |
score: 141.7 |
e-value: 2.8e-33 |
Identity: 64.95% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|18254413|gb|AAL66754.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] |
| Match: gi|16905206|gb|AAL31076.1| |
score: 141.7 |
e-value: 2.8e-33 |
Identity: 63.64% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|16905206|gb|AAL31076.1| putaive copia-like retrotransposon polyprotein, 5'-partial [Oryza sativa] |
| Match: gi|33113978|gb|AAP94600.1| |
score: 141.7 |
e-value: 2.8e-33 |
Identity: 64.95% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|33113978|gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] |
| Match: gi|37532886|ref|NP_920745.1| |
score: 141.7 |
e-value: 2.8e-33 |
Identity: 63.64% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|37532886|ref|NP_920745.1| putative copia-like retrotransposon polyprotein [Oryza sativa (japonica cultivar-group)]... |
| Match: gi|23495377|dbj|BAC19858.1| |
score: 140.6 |
e-value: 6.1e-33 |
Identity: 64.95% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|23495377|dbj|BAC19858.1| orf490 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7444451|pir||T10728 |
score: 139.8 |
e-value: 1e-32 |
Identity: 62.89% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|32489196|emb|CAE04381.1| |
score: 139 |
e-value: 1.8e-32 |
Identity: 60.61% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|32489196|emb|CAE04381.1| OSJNBa0027G07.23 [Oryza sativa (japonica cultivar-group)] gi|38347090|emb|CAE02562.2| OSJ... |
| Match: gi|7444420|pir||T01397 |
score: 138.7 |
e-value: 2.3e-32 |
Identity: 63.64% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7444420|pir||T01397 LTR gag/pol polyprotein homolog T4I9.16 - Arabidopsis thaliana gi|3924609|gb|AAC79110.1| putat... |
| Match: gi|4996363|dbj|BAA78424.1| |
score: 138.7 |
e-value: 2.3e-32 |
Identity: 63.64% |
Span: 297bp (64.0%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|4996367|dbj|BAA78426.1| |
score: 138.7 |
e-value: 2.3e-32 |
Identity: 63.64% |
Span: 297bp (64.0%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|14475941|gb|AAK62788.1| |
score: 138.3 |
e-value: 3.1e-32 |
Identity: 64.29% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|14475941|gb|AAK62788.1| polyprotein, putative [Arabidopsis thaliana] gi|18265373|dbj|BAB84015.1| polyprotein [Arab... |
| Match: gi|7444417|pir||T05745 |
score: 137.5 |
e-value: 5.2e-32 |
Identity: 63.64% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7444417|pir||T05745 hypothetical protein M4I22.20 - Arabidopsis thaliana gi|3269282|emb|CAA19715.1| putative prote... |
| Match: gi|13872712|emb|CAC37623.1| |
score: 137.1 |
e-value: 6.8e-32 |
Identity: 67.02% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|13872712|emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] |
| Match: gi|34907752|ref|NP_915223.1| |
score: 137.1 |
e-value: 6.8e-32 |
Identity: 60.82% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|37530442|ref|NP_919523.1| |
score: 137.1 |
e-value: 6.8e-32 |
Identity: 60.61% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|37530442|ref|NP_919523.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19920073|gb|AAM08505.1... |
| Match: gi|25301688|pir||H96650 |
score: 137.1 |
e-value: 6.8e-32 |
Identity: 67.02% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|25301688|pir||H96650 protein T3P18.3 [imported] - Arabidopsis thaliana gi|5454189|gb|AAD43604.1| T3P18.3 [Arabidop... |
| Match: gi|4996365|dbj|BAA78425.1| |
score: 137.1 |
e-value: 6.8e-32 |
Identity: 64.29% |
Span: 294bp (63.4%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|37534758|ref|NP_921681.1| |
score: 137.1 |
e-value: 6.8e-32 |
Identity: 61.62% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|37534758|ref|NP_921681.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|31432318|gb|AAP... |
| Match: gi|37532250|ref|NP_920427.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 62.89% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|37532250|ref|NP_920427.1| putative retrotransposon protein [Oryza sativa (japonica cultivar-group)] gi|19225034|gb... |
| Match: gi|14475946|gb|AAK62793.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 63.92% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|14475946|gb|AAK62793.1| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|20279486|gb|AAM18766.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 62.89% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|20279486|gb|AAM18766.1| putative copia-like retrotransposon Hopscotch polyprotein [Oryza sativa (japonica cultivar... |
| Match: gi|34910174|ref|NP_916434.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 64.29% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|34910174|ref|NP_916434.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|20160996|dbj|BA... |
| Match: gi|4996369|dbj|BAA78427.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 62.63% |
Span: 297bp (64.0%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|13991169|gb|AAK51235.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 68.09% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|13991169|gb|AAK51235.1| polyprotein [Arabidopsis thaliana] |
| Match: gi|4996361|dbj|BAA78423.1| |
score: 136.7 |
e-value: 8.9e-32 |
Identity: 63.92% |
Span: 291bp (62.7%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|23477804|gb|AAN34944.1| |
score: 136 |
e-value: 1.5e-31 |
Identity: 63.27% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|23477804|gb|AAN34944.1| Putative retroelement [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37532962|ref|NP_920783.1| |
score: 136 |
e-value: 1.5e-31 |
Identity: 63.27% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|37532962|ref|NP_920783.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|21671985|gb|AAM74347.1... |
| Match: gi|32487794|emb|CAE05417.1| |
score: 136 |
e-value: 1.5e-31 |
Identity: 62.24% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|32487794|emb|CAE05417.1| OSJNBa0035I04.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25301706|pir||C86438 |
score: 134 |
e-value: 5.8e-31 |
Identity: 63.83% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|25301706|pir||C86438 hypothetical protein F28K20.17 - Arabidopsis thaliana gi|4512618|gb|AAD21687.1| Strong simila... |
| Match: gi|7522104|pir||T31353 |
score: 132.9 |
e-value: 1.3e-30 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7522104|pir||T31353 polyprotein - Arabidopsis arenosa Evelknievel retrotransposon (fragment) gi|2865437|gb|AAC0267... |
| Match: gi|7444467|pir||T08945 |
score: 132.1 |
e-value: 2.2e-30 |
Identity: 60.61% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7444467|pir||T08945 hypothetical protein F25O24.20 - Arabidopsis thaliana gi|4972079|emb|CAB43904.1| putative prot... |
| Match: gi|2865427|gb|AAC02666.1| |
score: 132.1 |
e-value: 2.2e-30 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|2865424|gb|AAC02664.1| |
score: 132.1 |
e-value: 2.2e-30 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|37536776|ref|NP_922690.1| |
score: 131.7 |
e-value: 2.9e-30 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|37536776|ref|NP_922690.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|14165328|gb|AAK... |
| Match: gi|2865431|gb|AAC02669.1| |
score: 131.3 |
e-value: 3.7e-30 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|46981245|gb|AAT07563.1| |
score: 131.3 |
e-value: 3.7e-30 |
Identity: 58.59% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|46981245|gb|AAT07563.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] >gi|46981313|gb|AAT07631.1| ... |
| Match: gi|38605755|emb|CAE04319.3| |
score: 131 |
e-value: 4.9e-30 |
Identity: 58.76% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|38605755|emb|CAE04319.3| OSJNBb0016D16.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7444456|pir||T01908 |
score: 130.6 |
e-value: 6.4e-30 |
Identity: 57.58% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7444456|pir||T01908 hypothetical protein T12H20.12 - Arabidopsis thaliana gi|3600044|gb|AAC35532.1| contains simil... |
| Match: gi|7444419|pir||T04204 |
score: 130.6 |
e-value: 6.4e-30 |
Identity: 57.58% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7444419|pir||T04204 hypothetical protein T4F9.150 - Arabidopsis thaliana gi|4539447|emb|CAB40035.1| retrotransposo... |
| Match: gi|34900938|ref|NP_911815.1| |
score: 129.4 |
e-value: 1.4e-29 |
Identity: 62.11% |
Span: 285bp (61.4%) |
Frame: 3 |
| gi|34900938|ref|NP_911815.1| gag/pol polyprotein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7484656|pir||T14620 |
score: 129 |
e-value: 1.9e-29 |
Identity: 64.58% |
Span: 288bp (62.1%) |
Frame: 3 |
| gi|7484656|pir||T14620 hypothetical protein - beet mitochondrion gi|498931|emb|CAA78285.1| unnamed protein product [B... |
| Match: gi|25301689|pir||C96578 |
score: 129 |
e-value: 1.9e-29 |
Identity: 61.46% |
Span: 288bp (62.1%) |
Frame: 3 |
| gi|25301689|pir||C96578 hypothetical protein T18A20.5 [imported] - Arabidopsis thaliana gi|6056391|gb|AAF02855.1| Sim... |
| Match: gi|39546266|emb|CAE05127.3| |
score: 128.6 |
e-value: 2.4e-29 |
Identity: 62.11% |
Span: 285bp (61.4%) |
Frame: 3 |
| gi|39546266|emb|CAE05127.3| OSJNBa0079F16.14 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25301711|pir||E96624 |
score: 128.3 |
e-value: 3.2e-29 |
Identity: 56.7% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|25301711|pir||E96624 hypothetical protein T2K10.7 [imported] - Arabidopsis thaliana gi|4249381|gb|AAD14478.1| Stro... |
| Match: gi|25518330|pir||A86465 |
score: 127.9 |
e-value: 4.1e-29 |
Identity: 61.46% |
Span: 288bp (62.1%) |
Frame: 3 |
| gi|25518330|pir||A86465 hypothetical protein F12G12.8 [imported] - Arabidopsis thaliana gi|10086467|gb|AAG12527.1| Hy... |
| Match: gi|25301677|pir||B96509 |
score: 127.9 |
e-value: 4.1e-29 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|25301677|pir||B96509 protein F27F5.11 [imported] - Arabidopsis thaliana gi|7767675|gb|AAF69172.1| F27F5.11 [Arabid... |
| Match: gi|37534250|ref|NP_921427.1| |
score: 126.7 |
e-value: 9.2e-29 |
Identity: 61.05% |
Span: 285bp (61.4%) |
Frame: 3 |
| gi|37534250|ref|NP_921427.1| putative gypsy-type retrotransposon RIRE2 [Oryza sativa (japonica cultivar-group)] gi|31... |
| Match: gi|25301693|pir||F84480 |
score: 126.7 |
e-value: 9.2e-29 |
Identity: 58.59% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|25301693|pir||F84480 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|3779021|gb|AAC6720... |
| Match: gi|25301708|pir||B84523 |
score: 126.7 |
e-value: 9.2e-29 |
Identity: 59.57% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|25301708|pir||B84523 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|3650035|gb|AAC6129... |
| Match: gi|32488723|emb|CAE03600.1| |
score: 126.3 |
e-value: 1.2e-28 |
Identity: 56.57% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|32488723|emb|CAE03600.1| OSJNBb0004A17.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34897472|ref|NP_910082.1| |
score: 126.3 |
e-value: 1.2e-28 |
Identity: 56.57% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|34897472|ref|NP_910082.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|28269414|gb|AAO... |
| Match: gi|34902378|ref|NP_912535.1| |
score: 126.3 |
e-value: 1.2e-28 |
Identity: 56.57% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|34902378|ref|NP_912535.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica cultivar-group)] gi|244... |
| Match: gi|34895528|ref|NP_909107.1| |
score: 125.6 |
e-value: 2e-28 |
Identity: 56.57% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|34895528|ref|NP_909107.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|9558463|dbj|BAB03384... |
| Match: gi|12328472|dbj|BAB21132.1| |
score: 125.6 |
e-value: 2e-28 |
Identity: 60% |
Span: 285bp (61.4%) |
Frame: 3 |
| gi|12328472|dbj|BAB21132.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|4185312|gb|AAD09019.1| |
score: 125.2 |
e-value: 2.7e-28 |
Identity: 58.16% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|4185312|gb|AAD09019.1| copia protein [Zea mays] |
| Match: gi|7485052|pir||B71426 |
score: 124.4 |
e-value: 4.6e-28 |
Identity: 59.57% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|7485052|pir||B71426 hypothetical protein - Arabidopsis thaliana gi|2244959|emb|CAB10380.1| reverse transcriptase l... |
| Match: gi|7485052|pir||B71426 |
score: 124.4 |
e-value: 4.6e-28 |
Identity: 59.57% |
Span: 282bp (60.8%) |
Frame: 3 |
| gi|7485052|pir||B71426 hypothetical protein - Arabidopsis thaliana gi|2244959|emb|CAB10380.1| reverse transcriptase l... |
| Match: gi|7489803|pir||T04112 |
score: 124 |
e-value: 6e-28 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|7489803|pir||T04112 pol protein homolog - maize retrotransposon Opie-2 gi|3645899|gb|AAC49502.1| 5' end not determ... |
| Match: gi|18254418|gb|AAL66759.1| |
score: 124 |
e-value: 6e-28 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|18254418|gb|AAL66759.1| putative pol protein [Zea mays] |
| Match: gi|33113970|gb|AAP94592.1| |
score: 123.6 |
e-value: 7.8e-28 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|33113970|gb|AAP94592.1| retrotransposon Opie-2 [Zea mays] |
| Match: gi|31712106|gb|AAP68410.1| |
score: 122.9 |
e-value: 1.3e-27 |
Identity: 56.7% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|31712106|gb|AAP68410.1| putative gag/pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344211|emb|CAE01974.2| |
score: 122.9 |
e-value: 1.3e-27 |
Identity: 58.16% |
Span: 294bp (63.4%) |
Frame: 3 |
| OSJNBb0051N19.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|553073|gb|AAA33448.1| |
score: 122.9 |
e-value: 1.3e-27 |
Identity: 60% |
Span: 285bp (61.4%) |
Frame: 3 |
| gi|553073|gb|AAA33448.1| reverse transcriptase |
| Match: gi|283051|pir||S27768 |
score: 122.9 |
e-value: 1.3e-27 |
Identity: 60% |
Span: 285bp (61.4%) |
Frame: 3 |
| gi|283051|pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon (fragment) |
| Match: gi|17082479|gb|AAL35396.1| |
score: 122.1 |
e-value: 2.3e-27 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|17082479|gb|AAL35396.1| Opie2a pol [Zea mays] |
| Match: gi|17082481|gb|AAL35398.1| |
score: 122.1 |
e-value: 2.3e-27 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|17082481|gb|AAL35398.1| Opie2 pol [Zea mays] |
| Match: gi|38346582|emb|CAE04646.2| |
score: 122.1 |
e-value: 2.3e-27 |
Identity: 59.18% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|38346582|emb|CAE04646.2| OSJNBa0061G20.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914532|ref|NP_918613.1| |
score: 121.7 |
e-value: 3e-27 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 121.7 |
e-value: 3e-27 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|38346107|emb|CAE04585.2| |
score: 121.3 |
e-value: 3.9e-27 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|38346107|emb|CAE04585.2| OSJNBb0006N15.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37534234|ref|NP_921419.1| |
score: 121.3 |
e-value: 3.9e-27 |
Identity: 57.14% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|37534234|ref|NP_921419.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|31432007|gb|AAP53706.1|... |
| Match: gi|7444421|pir||A71444 |
score: 120.9 |
e-value: 5e-27 |
Identity: 58.42% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|9294121|dbj|BAB01972.1| |
score: 120.6 |
e-value: 6.6e-27 |
Identity: 53.61% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|9294121|dbj|BAB01972.1| copia-like retrotransposable element [Arabidopsis thaliana] |
| Match: gi|7444455|pir||T05744 |
score: 120.6 |
e-value: 6.6e-27 |
Identity: 59.6% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|7444455|pir||T05744 hypothetical protein M4I22.10 - Arabidopsis thaliana >gi|3269281|emb|CAA19714.1| putative prot... |
| Match: gi|48210051|gb|AAT40550.1| |
score: 119.8 |
e-value: 1.1e-26 |
Identity: 55% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|48210051|gb|AAT40550.1| putative receptor kinase [Solanum demissum] |
| Match: gi|18378607|gb|AAL68641.1| |
score: 119.4 |
e-value: 1.5e-26 |
Identity: 55.1% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|47824974|gb|AAT38747.1| |
score: 119.4 |
e-value: 1.5e-26 |
Identity: 57.29% |
Span: 288bp (62.1%) |
Frame: 3 |
| gi|47824974|gb|AAT38747.1| putative polyprotein [Solanum demissum] |
| Match: gi|38345241|emb|CAD41085.2| |
score: 119.4 |
e-value: 1.5e-26 |
Identity: 55.1% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|38345241|emb|CAD41085.2| OSJNBb0011N17.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903116|ref|NP_912905.1| |
score: 119 |
e-value: 1.9e-26 |
Identity: 54.08% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|34903116|ref|NP_912905.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6630685|dbj|BAA88531... |
| Match: gi|25301699|pir||F84531 |
score: 119 |
e-value: 1.9e-26 |
Identity: 55.67% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|25301699|pir||F84531 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4335731|gb|AAD1740... |
| Match: gi|25411795|pir||G84552 |
score: 118.6 |
e-value: 2.5e-26 |
Identity: 56.7% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|25411795|pir||G84552 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana >gi|4914370|gb|AAD329... |
| Match: gi|6598588|gb|AAF18643.1| |
score: 118.6 |
e-value: 2.5e-26 |
Identity: 56.57% |
Span: 297bp (64.0%) |
Frame: 3 |
| gi|6598588|gb|AAF18643.1| F5J5.14 [Arabidopsis thaliana] |
| Match: gi|25301687|pir||F96614 |
score: 118.2 |
e-value: 3.3e-26 |
Identity: 55.67% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|25301687|pir||F96614 probable copia-type polyprotein T18I24.5 [imported] - Arabidopsis thaliana gi|12321254|gb|AAG... |
| Match: gi|37530622|ref|NP_919613.1| |
score: 118.2 |
e-value: 3.3e-26 |
Identity: 55.1% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|37530622|ref|NP_919613.1| putative Zea mays retrotransposon Opie-2 [Oryza sativa (japonica cultivar-group)] gi|169... |
| Match: gi|37535486|ref|NP_922045.1| |
score: 117.9 |
e-value: 4.3e-26 |
Identity: 54.08% |
Span: 294bp (63.4%) |
Frame: 3 |
| gi|37535486|ref|NP_922045.1| putative copia-like polyprotein [Oryza sativa (japonica cultivar-group)] gi|22094347|gb|... |
| Match: gi|25301682|pir||G86301 |
score: 117.5 |
e-value: 5.6e-26 |
Identity: 57% |
Span: 288bp (62.1%) |
Frame: 3 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|11278364|pir||T47925 |
score: 117.5 |
e-value: 5.6e-26 |
Identity: 55.67% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|11278364|pir||T47925 copia-type polyprotein - Arabidopsis thaliana gi|6850900|emb|CAB71063.1| copia-type polyprote... |
| Match: gi|25301681|pir||F86246 |
score: 117.5 |
e-value: 5.6e-26 |
Identity: 55.67% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|25301681|pir||F86246 hypothetical protein [imported] - Arabidopsis thaliana gi|5734736|gb|AAD50001.1| Hypothetical... |
| Match: gi|40737034|gb|AAR89047.1| |
score: 117.5 |
e-value: 5.6e-26 |
Identity: 56.12% |
Span: 294bp (63.4%) |
Frame: 3 |
| putative integrase [Oryza sativa Japonica Group] |
| Match: gi|25301673|pir||F96509 |
score: 117.5 |
e-value: 5.6e-26 |
Identity: 58.42% |
Span: 291bp (62.7%) |
Frame: 3 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
|
| 1 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At4g23160.1 |
score: 108.2 |
e-value: 7e-25 |
Identity: 52% |
Span: 288bp (62.1%) |
Frame: 3 |
| At4g23160.1 68411.m03051 hypothetical protein copia-like retrotransposon Hopscotch polyprotein, Zea mays |
| Match: AtMg00820 |
score: 43.51 |
e-value: 2.1e-05 |
Identity: 55.88% |
Span: 102bp (22.0%) |
Frame: 3 |
| AtMg00820 orf170 \N |
|
