| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|34393586|dbj|BAC83213.1| |
score: 152.1 |
e-value: 9.3e-36 |
Identity: 66.67% |
Span: 351bp (45.3%) |
Frame: 3 |
| putative rRNA methylase [Oryza sativa Japonica Group] >gi215686941|dbj|BAG90774.1| unnamed protein product [Oryza sat... |
| Match: gi|15242287|ref|NP_197043.1| |
score: 140.6 |
e-value: 7.4e-33 |
Identity: 75.53% |
Span: 282bp (36.4%) |
Frame: 3 |
| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] >gi7671508|emb|CAB89349.1| rRNA methylase-li... |
| Match: gi|42522737|ref|NP_968117.1| |
score: 72.79 |
e-value: 7.1e-12 |
Identity: 41.3% |
Span: 276bp (35.6%) |
Frame: 3 |
| putative RNA methylase [Bdellovibrio bacteriovorus HD100] >gi39573933|emb|CAE79110.1| putative RNA methylase [Bdellov... |
| Match: gi|28207743|gb|AAO32614.1| |
score: 72.02 |
e-value: 1.2e-11 |
Identity: 38.1% |
Span: 315bp (40.6%) |
Frame: 3 |
| gi|28207743|gb|AAO32614.1| CR004 protein [Chlamydomonas reinhardtii] |
| Match: gi|20808975|ref|NP_624146.1| |
score: 59.69 |
e-value: 6.3e-08 |
Identity: 39.33% |
Span: 267bp (34.5%) |
Frame: 3 |
| gi|20808975|ref|NP_624146.1| rRNA methylase [Thermoanaerobacter tengcongensis] gi|20517641|gb|AAM25750.1| rRNA methyl... |
| Match: gi|21673707|ref|NP_661772.1| |
score: 58.15 |
e-value: 1.8e-07 |
Identity: 61.22% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|21673707|ref|NP_661772.1| tRNA methyltransferase SpoU [Chlorobium tepidum TLS] gi|21646829|gb|AAM72114.1| tRNA met... |
| Match: gi|32562924|dbj|BAC79237.1| |
score: 56.22 |
e-value: 6.9e-07 |
Identity: 53.06% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|32562924|dbj|BAC79237.1| tRNA (guanosine-2'-O-)-methyltransferase [Shewanella violacea] |
| Match: gi|15606763|ref|NP_214143.1| |
score: 55.07 |
e-value: 1.5e-06 |
Identity: 38.96% |
Span: 228bp (29.4%) |
Frame: 3 |
| gi|15606763|ref|NP_214143.1| rRNA methylase SpoU [Aquifex aeolicus] gi|3915169|sp|O67577|TRMH_AQUAE Probable tRNA (Gu... |
| Match: gi|23475629|ref|ZP_00130912.1| |
score: 54.3 |
e-value: 2.6e-06 |
Identity: 48.15% |
Span: 162bp (20.9%) |
Frame: 3 |
| gi|23475629|ref|ZP_00130912.1| COG0566: rRNA methylases [Desulfovibrio desulfuricans G20] |
| Match: gi|46580760|ref|YP_011568.1| |
score: 53.91 |
e-value: 3.4e-06 |
Identity: 42.11% |
Span: 225bp (29.0%) |
Frame: 3 |
| gi|46580760|ref|YP_011568.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio vulgaris subsp. vulgaris str. Hi... |
| Match: gi|46911829|emb|CAG18627.1| |
score: 53.14 |
e-value: 5.9e-06 |
Identity: 53.06% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|46911829|emb|CAG18627.1| putative tRNA methyltransferase [Photobacterium profundum] |
| Match: gi|16120390|ref|NP_403703.1| |
score: 51.99 |
e-value: 1.3e-05 |
Identity: 42.86% |
Span: 222bp (28.6%) |
Frame: 3 |
| gi|16120390|ref|NP_403703.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis] gi|22124024|ref|NP_667447.1| ... |
| Match: gi|15594398|ref|NP_212186.1| |
score: 51.6 |
e-value: 1.7e-05 |
Identity: 40.32% |
Span: 186bp (24.0%) |
Frame: 3 |
| gi|15594398|ref|NP_212186.1| spoU protein (spoU) [Borrelia burgdorferi] gi|3915341|sp|O51081|Y052_BORBU Hypothetical ... |
| Match: gi|48859745|ref|ZP_00313675.1| |
score: 50.45 |
e-value: 3.8e-05 |
Identity: 53.33% |
Span: 135bp (17.4%) |
Frame: 3 |
| gi|48859745|ref|ZP_00313675.1| COG0566: rRNA methylases [Clostridium thermocellum ATCC 27405] |
| Match: gi|45534082|ref|ZP_00184638.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 44.68% |
Span: 141bp (18.2%) |
Frame: 3 |
| gi|45534082|ref|ZP_00184638.1| hypothetical protein Mflo018501 [Mesoplasma florum L1] |
| Match: gi|15804192|ref|NP_290231.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 51.02% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|15804192|ref|NP_290231.1| putative RNA methylase [Escherichia coli O157:H7 EDL933] gi|15833780|ref|NP_312553.1| pu... |
| Match: gi|26250298|ref|NP_756338.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 51.02% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|26250298|ref|NP_756338.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli CFT073] gi|26110728|gb|AAN829... |
| Match: gi|16767028|ref|NP_462643.1| |
score: 50.06 |
e-value: 5e-05 |
Identity: 51.02% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|16767028|ref|NP_462643.1| putative tRNA/rRNA methyltransferase [Salmonella typhimurium LT2] gi|16422312|gb|AAL2260... |
| Match: gi|16762567|ref|NP_458184.1| |
score: 49.68 |
e-value: 6.5e-05 |
Identity: 51.02% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|16762567|ref|NP_458184.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp. enterica serovar Typ... |
| Match: gi|46200169|ref|YP_005836.1| |
score: 49.29 |
e-value: 8.5e-05 |
Identity: 51.02% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|46200169|ref|YP_005836.1| tRNA (Guanosine-2'-O-)-methyltransferase [Thermus thermophilus HB27] >gi|48425869|pdb|1V... |
| Match: gi|48864628|ref|ZP_00318516.1| |
score: 49.29 |
e-value: 8.5e-05 |
Identity: 44.83% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|48864628|ref|ZP_00318516.1| COG0566: rRNA methylases [Oenococcus oeni PSU-1] |
| Match: gi|27364301|ref|NP_759829.1| |
score: 49.29 |
e-value: 8.5e-05 |
Identity: 46.94% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|27364301|ref|NP_759829.1| rRNA methylases [Vibrio vulnificus CMCP6] gi|27360419|gb|AAO09356.1| rRNA methylases [Vi... |
| Match: gi|20808679|ref|NP_623850.1| |
score: 49.29 |
e-value: 8.5e-05 |
Identity: 42.86% |
Span: 168bp (21.7%) |
Frame: 3 |
| gi|20808679|ref|NP_623850.1| rRNA methylase [Thermoanaerobacter tengcongensis] gi|20517315|gb|AAM25454.1| rRNA methyl... |
| Match: gi|33860979|ref|NP_892540.1| |
score: 48.91 |
e-value: 0.00011 |
Identity: 41.03% |
Span: 225bp (29.0%) |
Frame: 3 |
| gi|33860979|ref|NP_892540.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus subsp. pastoris str. CCMP137... |
| Match: gi|37678424|ref|NP_933033.1| |
score: 48.91 |
e-value: 0.00011 |
Identity: 46.94% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|37678424|ref|NP_933033.1| rRNA methylase [Vibrio vulnificus YJ016] gi|37197164|dbj|BAC93004.1| rRNA methylase [Vib... |
| Match: gi|15807204|ref|NP_295933.1| |
score: 48.91 |
e-value: 0.00011 |
Identity: 48.98% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|15807204|ref|NP_295933.1| rRNA methylase SpoU [Deinococcus radiodurans] gi|7473864|pir||C75301 rRNA methylase SpoU... |
| Match: gi|48825603|ref|ZP_00286846.1| |
score: 48.91 |
e-value: 0.00011 |
Identity: 44.83% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|48825603|ref|ZP_00286846.1| COG0566: rRNA methylases [Enterococcus faecium] |
| Match: gi|31195879|ref|XP_306887.1| |
score: 48.14 |
e-value: 0.00019 |
Identity: 45.28% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|31195879|ref|XP_306887.1| ENSANGP00000000448 [Anopheles gambiae] gi|21290535|gb|EAA02680.1| ENSANGP00000000448 [An... |
| Match: gi|33322913|gb|AAQ07193.1| |
score: 47.75 |
e-value: 0.00025 |
Identity: 40.82% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|33322913|gb|AAQ07193.1| trmh family RNA methyltransferase [Lactobacillus delbrueckii subsp. lactis] |
| Match: gi|42519503|ref|NP_965433.1| |
score: 47.75 |
e-value: 0.00025 |
Identity: 43.48% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|42519503|ref|NP_965433.1| hypothetical protein LJ1627 [Lactobacillus johnsonii NCC 533] >gi|41583791|gb|AAS09399.1... |
| Match: gi|47458982|ref|YP_015844.1| |
score: 47.75 |
e-value: 0.00025 |
Identity: 34.92% |
Span: 189bp (24.4%) |
Frame: 3 |
| gi|47458982|ref|YP_015844.1| spoU class tRNA/rRNA methylase [Mycoplasma mobile 163K] >gi|47458310|gb|AAT27633.1| spoU... |
| Match: gi|45524759|ref|ZP_00176025.1| |
score: 47.75 |
e-value: 0.00025 |
Identity: 51.02% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|45524759|ref|ZP_00176025.1| COG0566: rRNA methylases [Crocosphaera watsonii WH 8501] |
| Match: gi|23003468|ref|ZP_00047130.1| |
score: 47.37 |
e-value: 0.00032 |
Identity: 44.23% |
Span: 156bp (20.1%) |
Frame: 3 |
| gi|23003468|ref|ZP_00047130.1| COG0566: rRNA methylases [Lactobacillus gasseri] |
| Match: gi|38233754|ref|NP_939521.1| |
score: 47.37 |
e-value: 0.00032 |
Identity: 40.82% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|38233754|ref|NP_939521.1| Putative rRNA methyltransferase [Corynebacterium diphtheriae] gi|38200015|emb|CAE49684.1... |
| Match: gi|23099587|ref|NP_693053.1| |
score: 46.98 |
e-value: 0.00042 |
Identity: 38.46% |
Span: 156bp (20.1%) |
Frame: 3 |
| gi|23099587|ref|NP_693053.1| rRNA methylase [Oceanobacillus iheyensis HTE831] gi|22777817|dbj|BAC14088.1| rRNA methyl... |
| Match: gi|24378679|ref|NP_720634.1| |
score: 46.98 |
e-value: 0.00042 |
Identity: 41.38% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|24378679|ref|NP_720634.1| putative tRNA/rRNA methyltransferase [Streptococcus mutans UA159] gi|24376542|gb|AAN5794... |
| Match: gi|15675741|ref|NP_269915.1| |
score: 46.98 |
e-value: 0.00042 |
Identity: 41.38% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|15675741|ref|NP_269915.1| putative tRNA/rRNA methyltransferase [Streptococcus pyogenes] gi|19746851|ref|NP_607987.... |
| Match: gi|21911205|ref|NP_665473.1| |
score: 46.98 |
e-value: 0.00042 |
Identity: 41.38% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|21911205|ref|NP_665473.1| putative tRNA/rRNA methyltransferase, spoU family [Streptococcus pyogenes MGAS315] gi|28... |
| Match: gi|16125439|ref|NP_420003.1| |
score: 46.98 |
e-value: 0.00042 |
Identity: 40.43% |
Span: 141bp (18.2%) |
Frame: 3 |
| gi|16125439|ref|NP_420003.1| spoU rRNA methylase family protein [Caulobacter crescentus CB15] gi|25316738|pir||G87396... |
| Match: gi|29376897|ref|NP_816051.1| |
score: 46.98 |
e-value: 0.00042 |
Identity: 45.65% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|29376897|ref|NP_816051.1| RNA methyltransferase, TrmH family [Enterococcus faecalis V583] gi|29344362|gb|AAO82121.... |
| Match: gi|29346770|ref|NP_810273.1| |
score: 46.59 |
e-value: 0.00055 |
Identity: 43.64% |
Span: 165bp (21.3%) |
Frame: 3 |
| gi|29346770|ref|NP_810273.1| tRNA/rRNA methyltransferase [Bacteroides thetaiotaomicron VPI-5482] gi|29338667|gb|AAO76... |
| Match: gi|23003698|ref|ZP_00047351.1| |
score: 46.59 |
e-value: 0.00055 |
Identity: 41.3% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|23003698|ref|ZP_00047351.1| COG0566: rRNA methylases [Lactobacillus gasseri] |
| Match: gi|15672589|ref|NP_266763.1| |
score: 46.59 |
e-value: 0.00055 |
Identity: 50% |
Span: 132bp (17.0%) |
Frame: 3 |
| gi|15672589|ref|NP_266763.1| tRNA/rRNA methyltransferase [Lactococcus lactis subsp. lactis] gi|25316736|pir||G86700 t... |
| Match: gi|28896932|ref|NP_796537.1| |
score: 46.59 |
e-value: 0.00055 |
Identity: 46.94% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|28896932|ref|NP_796537.1| tRNA methyltransferase [Vibrio parahaemolyticus RIMD 2210633] gi|28805140|dbj|BAC58421.1... |
| Match: gi|42518495|ref|NP_964425.1| |
score: 46.59 |
e-value: 0.00055 |
Identity: 44.23% |
Span: 156bp (20.1%) |
Frame: 3 |
| gi|42518495|ref|NP_964425.1| hypothetical protein LJ0402 [Lactobacillus johnsonii NCC 533] >gi|41582780|gb|AAS08391.1... |
| Match: gi|15903354|ref|NP_358904.1| |
score: 46.21 |
e-value: 0.00072 |
Identity: 39.66% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|15903354|ref|NP_358904.1| tRNA (guanosine-2'-O-)-methyltransferase, TrmH family [Streptococcus pneumoniae R6] gi|2... |
| Match: gi|22536393|ref|NP_687244.1| |
score: 46.21 |
e-value: 0.00072 |
Identity: 41.38% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|22536393|ref|NP_687244.1| RNA methyltransferase, TrmH family, group 3 [Streptococcus agalactiae 2603V/R] gi|225332... |
| Match: gi|46113629|ref|ZP_00183176.2| |
score: 46.21 |
e-value: 0.00072 |
Identity: 40% |
Span: 135bp (17.4%) |
Frame: 3 |
| gi|46113629|ref|ZP_00183176.2| COG0566: rRNA methylases [Exiguobacterium sp. 255-15] |
| Match: gi|25010279|ref|NP_734674.1| |
score: 46.21 |
e-value: 0.00072 |
Identity: 41.38% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|25010279|ref|NP_734674.1| Unknown [Streptococcus agalactiae NEM316] gi|23094631|emb|CAD45849.1| Unknown [Streptoco... |
| Match: gi|48855751|ref|ZP_00309909.1| |
score: 46.21 |
e-value: 0.00072 |
Identity: 41.51% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|48855751|ref|ZP_00309909.1| COG0566: rRNA methylases [Cytophaga hutchinsonii] |
| Match: gi|15896402|ref|NP_349751.1| |
score: 46.21 |
e-value: 0.00072 |
Identity: 35.62% |
Span: 219bp (28.3%) |
Frame: 3 |
| gi|15896402|ref|NP_349751.1| RRNA methylase, YACO B.subtilis ortholog [Clostridium acetobutylicum] gi|25316722|pir||H... |
| Match: gi|15901307|ref|NP_345911.1| |
score: 46.21 |
e-value: 0.00072 |
Identity: 39.66% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|15901307|ref|NP_345911.1| spoU rRNA methylase family protein [Streptococcus pneumoniae TIGR4] gi|25316718|pir||F95... |
| Match: gi|21674445|ref|NP_662510.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 43.4% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|21674445|ref|NP_662510.1| SpoU rRNA methylase family protein [Chlorobium tepidum TLS] gi|21647630|gb|AAM72852.1| S... |
| Match: gi|15639103|ref|NP_218549.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 52.17% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|15639103|ref|NP_218549.1| rRNA methylase, putative [Treponema pallidum subsp. pallidum str. Nichols] gi|7521403|pi... |
| Match: gi|15895625|ref|NP_348974.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 51.06% |
Span: 141bp (18.2%) |
Frame: 3 |
| gi|15895625|ref|NP_348974.1| RRNA methylase, YSGA B.subtilis ortholog [Clostridium acetobutylicum] gi|25316724|pir||G... |
| Match: gi|28378262|ref|NP_785154.1| |
score: 45.82 |
e-value: 0.001 |
Identity: 46.81% |
Span: 141bp (18.2%) |
Frame: 3 |
| gi|28378262|ref|NP_785154.1| rRNA methylase [Lactobacillus plantarum WCFS1] gi|28271097|emb|CAD64002.1| rRNA methylas... |
| Match: gi|33239873|ref|NP_874815.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 39.71% |
Span: 204bp (26.3%) |
Frame: 3 |
| gi|33239873|ref|NP_874815.1| rRNA methylase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237399|gb|AAP... |
| Match: gi|28212189|ref|NP_783133.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 41.07% |
Span: 168bp (21.7%) |
Frame: 3 |
| gi|28212189|ref|NP_783133.1| 23S rRNA methyltransferase [Clostridium tetani E88] gi|28204633|gb|AAO37070.1| 23S rRNA ... |
| Match: gi|33866213|ref|NP_897772.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 47.17% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|33866213|ref|NP_897772.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH 8102] gi|3363918... |
| Match: gi|48891870|ref|ZP_00325319.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 36.54% |
Span: 156bp (20.1%) |
Frame: 3 |
| gi|48891870|ref|ZP_00325319.1| COG0566: rRNA methylases [Trichodesmium erythraeum IMS101] |
| Match: gi|42526951|ref|NP_972049.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 50% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|42526951|ref|NP_972049.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola ATCC 35405] >gi|4181726... |
| Match: gi|29374705|ref|NP_813857.1| |
score: 45.44 |
e-value: 0.001 |
Identity: 44.23% |
Span: 156bp (20.1%) |
Frame: 3 |
| gi|29374705|ref|NP_813857.1| RNA methyltransferase, TrmH family [Enterococcus faecalis V583] gi|29342163|gb|AAO79929.... |
| Match: gi|49236345|ref|ZP_00330405.1| |
score: 45.05 |
e-value: 0.002 |
Identity: 37.88% |
Span: 192bp (24.8%) |
Frame: 3 |
| gi|49236345|ref|ZP_00330405.1| COG0566: rRNA methylases [Moorella thermoacetica ATCC 39073] |
| Match: gi|48870450|ref|ZP_00323172.1| |
score: 45.05 |
e-value: 0.002 |
Identity: 43.18% |
Span: 132bp (17.0%) |
Frame: 3 |
| gi|48870450|ref|ZP_00323172.1| COG0566: rRNA methylases [Pediococcus pentosaceus ATCC 25745] |
| Match: gi|31196829|ref|XP_307362.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 48.84% |
Span: 129bp (16.6%) |
Frame: 3 |
| gi|31196829|ref|XP_307362.1| ENSANGP00000002005 [Anopheles gambiae] gi|21290960|gb|EAA03105.1| ENSANGP00000002005 [An... |
| Match: gi|22218790|pdb|1IPA|A |
score: 44.67 |
e-value: 0.002 |
Identity: 42.86% |
Span: 168bp (21.7%) |
Frame: 3 |
| gi|22218790|pdb|1IPA|A Chain A, Crystal Structure Of Rna 2'-O Ribose Methyltransferase |
| Match: gi|23024868|ref|ZP_00064059.1| |
score: 44.28 |
e-value: 0.003 |
Identity: 41.38% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|23024868|ref|ZP_00064059.1| COG0566: rRNA methylases [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] |
| Match: gi|16079917|ref|NP_390743.1| |
score: 44.28 |
e-value: 0.003 |
Identity: 41.3% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|16079917|ref|NP_390743.1| similar to rRNA methylase [Bacillus subtilis] gi|7475810|pir||G69984 rRNA methylase homo... |
| Match: gi|48849107|ref|ZP_00303351.1| |
score: 44.28 |
e-value: 0.003 |
Identity: 39.22% |
Span: 153bp (19.7%) |
Frame: 3 |
| gi|48849107|ref|ZP_00303351.1| COG0566: rRNA methylases [Novosphingobium aromaticivorans DSM 12444] |
| Match: gi|22973836|ref|ZP_00020312.1| |
score: 43.9 |
e-value: 0.004 |
Identity: 35.19% |
Span: 162bp (20.9%) |
Frame: 3 |
| gi|22973836|ref|ZP_00020312.1| hypothetical protein [Chloroflexus aurantiacus] |
| Match: gi|21402605|ref|NP_658590.1| |
score: 43.9 |
e-value: 0.004 |
Identity: 43.48% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|21402605|ref|NP_658590.1| SpoU_methylase, SpoU rRNA Methylase family [Bacillus anthracis A2012] gi|30264631|ref|NP... |
| Match: gi|42783734|ref|NP_980981.1| |
score: 43.9 |
e-value: 0.004 |
Identity: 43.48% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|42783734|ref|NP_980981.1| RNA methyltransferase, TrmH family [Bacillus cereus ATCC 10987] >gi|42739664|gb|AAS43589... |
| Match: gi|30022637|ref|NP_834268.1| |
score: 43.9 |
e-value: 0.004 |
Identity: 43.48% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|30022637|ref|NP_834268.1| 23S rRNA methyltransferase [Bacillus cereus ATCC 14579] gi|29898195|gb|AAP11469.1| 23S r... |
| Match: gi|21674078|ref|NP_662143.1| |
score: 43.9 |
e-value: 0.004 |
Identity: 44% |
Span: 150bp (19.4%) |
Frame: 3 |
| gi|21674078|ref|NP_662143.1| SpoU rRNA methylase family protein [Chlorobium tepidum TLS] gi|21647231|gb|AAM72485.1| S... |
| Match: gi|38234534|ref|NP_940301.1| |
score: 43.51 |
e-value: 0.005 |
Identity: 50% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|38234534|ref|NP_940301.1| SpoU rRNA Methylase family protein [Corynebacterium diphtheriae] gi|38200797|emb|CAE5050... |
| Match: gi|15615674|ref|NP_243978.1| |
score: 43.51 |
e-value: 0.005 |
Identity: 41.3% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|15615674|ref|NP_243978.1| rRNA methylase [Bacillus halodurans] gi|25316739|pir||H84038 rRNA methylase BH3112 [impo... |
| Match: gi|18310871|ref|NP_562805.1| |
score: 43.51 |
e-value: 0.005 |
Identity: 40.43% |
Span: 141bp (18.2%) |
Frame: 3 |
| gi|18310871|ref|NP_562805.1| probable rRNA methylase [Clostridium perfringens] gi|18145553|dbj|BAB81595.1| probable r... |
| Match: gi|33862541|ref|NP_894101.1| |
score: 43.51 |
e-value: 0.005 |
Identity: 49.06% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|33862541|ref|NP_894101.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str. MIT 9313] gi|33640654|e... |
| Match: gi|15673854|ref|NP_268029.1| |
score: 43.51 |
e-value: 0.005 |
Identity: 37.93% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|15673854|ref|NP_268029.1| tRNA-guanosine methyltransferase [Lactococcus lactis subsp. lactis] gi|25316693|pir||H86... |
| Match: gi|48835514|ref|ZP_00292513.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 43.64% |
Span: 165bp (21.3%) |
Frame: 3 |
| gi|48835514|ref|ZP_00292513.1| COG0566: rRNA methylases [Thermobifida fusca] |
| Match: gi|21909794|ref|NP_664062.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 45.28% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|21909794|ref|NP_664062.1| putative spoU rRNA Methylase family protein [Streptococcus pyogenes MGAS315] gi|28896513... |
| Match: gi|19745515|ref|NP_606651.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 45.28% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|19745515|ref|NP_606651.1| putative rRNA methylase [Streptococcus pyogenes MGAS8232] gi|19747633|gb|AAL97150.1| put... |
| Match: gi|15674507|ref|NP_268681.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 45.28% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|15674507|ref|NP_268681.1| putative rRNA methylase [Streptococcus pyogenes] gi|13621609|gb|AAK33402.1| putative rRN... |
| Match: gi|23121814|ref|ZP_00103993.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 41.51% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|23121814|ref|ZP_00103993.1| COG0566: rRNA methylases [Desulfitobacterium hafniense] |
| Match: gi|32475172|ref|NP_868166.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 41.51% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|32475172|ref|NP_868166.1| spoU rRNA methylase family protein [Pirellula sp.] gi|32445713|emb|CAD78444.1| spoU rRNA... |
| Match: gi|28377488|ref|NP_784380.1| |
score: 43.13 |
e-value: 0.006 |
Identity: 39.66% |
Span: 174bp (22.5%) |
Frame: 3 |
| gi|28377488|ref|NP_784380.1| tRNA/rRNA methyltransferase [Lactobacillus plantarum WCFS1] gi|28270320|emb|CAD63221.1| ... |
| Match: gi|22298586|ref|NP_681833.1| |
score: 42.74 |
e-value: 0.008 |
Identity: 37.14% |
Span: 210bp (27.1%) |
Frame: 3 |
| gi|22298586|ref|NP_681833.1| ORF_ID:tll1042~putative tRNA/rRNA methyltransferase [Thermosynechococcus elongatus BP-1]... |
| Match: gi|15903830|ref|NP_359380.1| |
score: 42.74 |
e-value: 0.008 |
Identity: 48.89% |
Span: 135bp (17.4%) |
Frame: 3 |
| gi|15903830|ref|NP_359380.1| Possible rRNA/tRNA methylase [Streptococcus pneumoniae R6] gi|25316728|pir||B99095 proba... |
| Match: gi|15827088|ref|NP_301351.1| |
score: 42.74 |
e-value: 0.008 |
Identity: 47.83% |
Span: 138bp (17.8%) |
Frame: 3 |
| gi|15827088|ref|NP_301351.1| putative methyltransferase [Mycobacterium leprae] gi|25316690|pir||D86949 probable methy... |
| Match: gi|15901796|ref|NP_346400.1| |
score: 42.74 |
e-value: 0.008 |
Identity: 48.89% |
Span: 135bp (17.4%) |
Frame: 3 |
| gi|15901796|ref|NP_346400.1| spoU rRNA Methylase family protein [Streptococcus pneumoniae TIGR4] gi|25316719|pir||G95... |
| Match: gi|46447426|ref|YP_008791.1| |
score: 42.74 |
e-value: 0.008 |
Identity: 37.04% |
Span: 162bp (20.9%) |
Frame: 3 |
| gi|46447426|ref|YP_008791.1| putative rRNA methylase [Parachlamydia sp. UWE25] >gi|46401067|emb|CAF24516.1| putative ... |
| Match: gi|46319202|ref|ZP_00219616.1| |
score: 42.36 |
e-value: 0.01 |
Identity: 45.28% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|46319202|ref|ZP_00219616.1| COG0566: rRNA methylases [Burkholderia cepacia R1808] |
| Match: gi|46105657|ref|ZP_00199623.1| |
score: 42.36 |
e-value: 0.01 |
Identity: 46.94% |
Span: 147bp (19.0%) |
Frame: 3 |
| gi|46105657|ref|ZP_00199623.1| COG0566: rRNA methylases [Rubrobacter xylanophilus DSM 9941] |
| Match: gi|48894153|ref|ZP_00327351.1| |
score: 42.36 |
e-value: 0.01 |
Identity: 35.09% |
Span: 165bp (21.3%) |
Frame: 3 |
| gi|48894153|ref|ZP_00327351.1| COG0566: rRNA methylases [Trichodesmium erythraeum IMS101] |
| Match: gi|42561476|ref|NP_975927.1| |
score: 42.36 |
e-value: 0.01 |
Identity: 38.64% |
Span: 132bp (17.0%) |
Frame: 3 |
| gi|42561476|ref|NP_975927.1| rRNA Methylase [Mycoplasma mycoides subsp. mycoides SC str. PG1] >gi|42492975|emb|CAE775... |
| Match: gi|48769568|ref|ZP_00273913.1| |
score: 42.36 |
e-value: 0.01 |
Identity: 45.28% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|48769568|ref|ZP_00273913.1| COG0566: rRNA methylases [Ralstonia metallidurans CH34] |
| Match: gi|45658662|ref|YP_002748.1| |
score: 41.97 |
e-value: 0.014 |
Identity: 39.58% |
Span: 144bp (18.6%) |
Frame: 3 |
| gi|45658662|ref|YP_002748.1| rRNA methylase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] >gi|4560... |
| Match: gi|15644487|ref|NP_229539.1| |
score: 41.97 |
e-value: 0.014 |
Identity: 43.4% |
Span: 159bp (20.5%) |
Frame: 3 |
| gi|15644487|ref|NP_229539.1| conserved hypothetical protein [Thermotoga maritima] gi|7448027|pir||D72218 conserved hy... |
| Match: gi|15828649|ref|NP_326009.1| |
score: 41.97 |
e-value: 0.014 |
Identity: 44.68% |
Span: 141bp (18.2%) |
Frame: 3 |
| gi|15828649|ref|NP_326009.1| TRNA/RRNA METHYLTRANSFERASE [Mycoplasma pulmonis] gi|25316688|pir||B90534 trna/rrna meth... |
| Match: gi|15242287|ref|NP_197043.1| |
score: 23.1 |
e-value: 7.4e-33 |
Identity: 55% |
Span: 60bp (7.7%) |
Frame: 2 |
| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] >gi7671508|emb|CAB89349.1| rRNA methylase-li... |
|
| 68 lower scoring hits censored -- only 100 best hits are stored. |
