| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|25301673|pir||F96509 |
score: 62.77 |
e-value: 8.2e-28 |
Identity: 59.52% |
Span: 126bp (10.2%) |
Frame: -3 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|7444421|pir||A71444 |
score: 62.77 |
e-value: 3.7e-29 |
Identity: 59.52% |
Span: 126bp (10.2%) |
Frame: -3 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 61.62 |
e-value: 7.7e-31 |
Identity: 50.82% |
Span: 180bp (14.6%) |
Frame: -1 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7444451|pir||T10728 |
score: 60.85 |
e-value: 8e-29 |
Identity: 58.14% |
Span: 129bp (10.5%) |
Frame: -3 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|38344705|emb|CAE05247.2| |
score: 60.08 |
e-value: 3.2e-25 |
Identity: 37.5% |
Span: 204bp (16.6%) |
Frame: -3 |
| gi|38344705|emb|CAE05247.2| OSJNBb0115I09.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903244|ref|NP_912969.1| |
score: 59.31 |
e-value: 1.8e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34903244|ref|NP_912969.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6539553|dbj|BAA88170... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 58.92 |
e-value: 1e-32 |
Identity: 42.62% |
Span: 177bp (14.4%) |
Frame: -3 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|7444414|pir||T02206 |
score: 58.92 |
e-value: 6e-30 |
Identity: 44.44% |
Span: 183bp (14.9%) |
Frame: -3 |
| gi|7444414|pir||T02206 hypothetical protein - common tobacco retrotransposon Tto1 gi|1167523|dbj|BAA11674.1| ORF(AA 1... |
| Match: gi|34907752|ref|NP_915223.1| |
score: 58.54 |
e-value: 1.7e-28 |
Identity: 51.16% |
Span: 129bp (10.5%) |
Frame: -3 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|38347007|emb|CAE02261.2| |
score: 58.54 |
e-value: 3.1e-25 |
Identity: 37.5% |
Span: 204bp (16.6%) |
Frame: -3 |
| gi|38347007|emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346534|emb|CAE04541.2| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32488578|emb|CAE03086.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|32488578|emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa (japonica cultivar-group)] gi|38345937|emb|CAD41412.2| OSJN... |
| Match: gi|24431600|gb|AAN61480.1| |
score: 58.15 |
e-value: 5e-26 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34915142|ref|NP_918918.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34915142|ref|NP_918918.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|34913798|ref|NP_918246.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34913798|ref|NP_918246.1| putative polyprotein from transposon TNT 1-94 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|48475093|gb|AAT44162.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| putative polyprotein [Oryza sativa Japonica Group] |
| Match: gi|34900652|ref|NP_911672.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34900652|ref|NP_911672.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|34914500|ref|NP_918597.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34914500|ref|NP_918597.1| putative retrovirus-related pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|12328467|dbj|BAB21127.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|12328467|dbj|BAB21127.1| putative retrotransposon RIRE1 poly protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30089754|gb|AAP20858.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|30089754|gb|AAP20858.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535968|ref|NP_922286.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|37535968|ref|NP_922286.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|15144313|gb|AAK84454.1|... |
| Match: gi|38346634|emb|CAD40744.2| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34913882|ref|NP_918288.1| |
score: 58.15 |
e-value: 4e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34913882|ref|NP_918288.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|20161774|dbj|BAB90690.1... |
| Match: gi|34906176|ref|NP_914435.1| |
score: 58.15 |
e-value: 3.1e-25 |
Identity: 52.27% |
Span: 132bp (10.7%) |
Frame: -3 |
| gi|34906176|ref|NP_914435.1| putative retrovirous-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (jap... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 57.38 |
e-value: 7.7e-31 |
Identity: 45% |
Span: 174bp (14.1%) |
Frame: -3 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30103001|gb|AAP21414.1| |
score: 57 |
e-value: 1e-32 |
Identity: 50.82% |
Span: 180bp (14.6%) |
Frame: -1 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 57 |
e-value: 4.9e-32 |
Identity: 50.82% |
Span: 180bp (14.6%) |
Frame: -1 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 56.61 |
e-value: 4.9e-32 |
Identity: 40.98% |
Span: 177bp (14.4%) |
Frame: -3 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|7444414|pir||T02206 |
score: 49.29 |
e-value: 6e-30 |
Identity: 42.55% |
Span: 141bp (11.4%) |
Frame: -3 |
| gi|7444414|pir||T02206 hypothetical protein - common tobacco retrotransposon Tto1 gi|1167523|dbj|BAA11674.1| ORF(AA 1... |
| Match: gi|25301673|pir||F96509 |
score: 48.52 |
e-value: 8.2e-28 |
Identity: 50% |
Span: 126bp (10.2%) |
Frame: -3 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|34907752|ref|NP_915223.1| |
score: 48.52 |
e-value: 1.7e-28 |
Identity: 54.76% |
Span: 126bp (10.2%) |
Frame: -3 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|7444421|pir||A71444 |
score: 48.14 |
e-value: 3.7e-29 |
Identity: 47.62% |
Span: 126bp (10.2%) |
Frame: -3 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|7444451|pir||T10728 |
score: 46.98 |
e-value: 8e-29 |
Identity: 54.76% |
Span: 126bp (10.2%) |
Frame: -3 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|34907752|ref|NP_915223.1| |
score: 45.82 |
e-value: 1.7e-28 |
Identity: 38.98% |
Span: 177bp (14.4%) |
Frame: -1 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|7444414|pir||T02206 |
score: 45.44 |
e-value: 6e-30 |
Identity: 40% |
Span: 198bp (16.1%) |
Frame: -2 |
| gi|7444414|pir||T02206 hypothetical protein - common tobacco retrotransposon Tto1 gi|1167523|dbj|BAA11674.1| ORF(AA 1... |
| Match: gi|7444451|pir||T10728 |
score: 45.05 |
e-value: 8e-29 |
Identity: 38.98% |
Span: 177bp (14.4%) |
Frame: -1 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 43.9 |
e-value: 4.9e-32 |
Identity: 48.78% |
Span: 123bp (10.0%) |
Frame: -3 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 43.9 |
e-value: 1e-32 |
Identity: 48.78% |
Span: 123bp (10.0%) |
Frame: -3 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|7444421|pir||A71444 |
score: 43.13 |
e-value: 3.7e-29 |
Identity: 37.7% |
Span: 180bp (14.6%) |
Frame: -1 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|24431600|gb|AAN61480.1| |
score: 42.36 |
e-value: 5e-26 |
Identity: 38% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346634|emb|CAD40744.2| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903244|ref|NP_912969.1| |
score: 41.97 |
e-value: 1.8e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34903244|ref|NP_912969.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6539553|dbj|BAA88170... |
| Match: gi|32488578|emb|CAE03086.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|32488578|emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa (japonica cultivar-group)] gi|38345937|emb|CAD41412.2| OSJN... |
| Match: gi|38346534|emb|CAE04541.2| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34906176|ref|NP_914435.1| |
score: 41.97 |
e-value: 3.1e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34906176|ref|NP_914435.1| putative retrovirous-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (jap... |
| Match: gi|37535968|ref|NP_922286.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|37535968|ref|NP_922286.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|15144313|gb|AAK84454.1|... |
| Match: gi|34913882|ref|NP_918288.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34913882|ref|NP_918288.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|20161774|dbj|BAB90690.1... |
| Match: gi|24431600|gb|AAN61480.1| |
score: 41.97 |
e-value: 5e-26 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30089754|gb|AAP20858.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|30089754|gb|AAP20858.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34913798|ref|NP_918246.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34913798|ref|NP_918246.1| putative polyprotein from transposon TNT 1-94 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|38347007|emb|CAE02261.2| |
score: 41.97 |
e-value: 3.1e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|38347007|emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34915142|ref|NP_918918.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34915142|ref|NP_918918.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|48475093|gb|AAT44162.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| putative polyprotein [Oryza sativa Japonica Group] |
| Match: gi|34900652|ref|NP_911672.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34900652|ref|NP_911672.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|34914500|ref|NP_918597.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|34914500|ref|NP_918597.1| putative retrovirus-related pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|12328467|dbj|BAB21127.1| |
score: 41.97 |
e-value: 4e-25 |
Identity: 42.31% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|12328467|dbj|BAB21127.1| putative retrotransposon RIRE1 poly protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344705|emb|CAE05247.2| |
score: 41.2 |
e-value: 3.2e-25 |
Identity: 38% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|38344705|emb|CAE05247.2| OSJNBb0115I09.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7444414|pir||T02206 |
score: 41.2 |
e-value: 6e-30 |
Identity: 45.83% |
Span: 144bp (11.7%) |
Frame: -1 |
| gi|7444414|pir||T02206 hypothetical protein - common tobacco retrotransposon Tto1 gi|1167523|dbj|BAA11674.1| ORF(AA 1... |
| Match: gi|25301673|pir||F96509 |
score: 39.66 |
e-value: 8.2e-28 |
Identity: 34.43% |
Span: 180bp (14.6%) |
Frame: -1 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|32489843|emb|CAE05707.1| |
score: 39.66 |
e-value: 7.7e-31 |
Identity: 40.68% |
Span: 168bp (13.6%) |
Frame: -2 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|30089754|gb|AAP20858.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|30089754|gb|AAP20858.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903244|ref|NP_912969.1| |
score: 39.28 |
e-value: 1.8e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|34903244|ref|NP_912969.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6539553|dbj|BAA88170... |
| Match: gi|34906176|ref|NP_914435.1| |
score: 39.28 |
e-value: 3.1e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|34906176|ref|NP_914435.1| putative retrovirous-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (jap... |
| Match: gi|34906176|ref|NP_914435.1| |
score: 39.28 |
e-value: 3.1e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|34906176|ref|NP_914435.1| putative retrovirous-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (jap... |
| Match: gi|38347007|emb|CAE02261.2| |
score: 39.28 |
e-value: 3.1e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|38347007|emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34913882|ref|NP_918288.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|34913882|ref|NP_918288.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|20161774|dbj|BAB90690.1... |
| Match: gi|32488578|emb|CAE03086.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|32488578|emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa (japonica cultivar-group)] gi|38345937|emb|CAD41412.2| OSJN... |
| Match: gi|38346534|emb|CAE04541.2| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346634|emb|CAD40744.2| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|32489843|emb|CAE05707.1| |
score: 39.28 |
e-value: 7.7e-31 |
Identity: 43.9% |
Span: 123bp (10.0%) |
Frame: -3 |
| gi|32489843|emb|CAE05707.1| OSJNBb0065J09.3 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535968|ref|NP_922286.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|37535968|ref|NP_922286.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|15144313|gb|AAK84454.1|... |
| Match: gi|12328467|dbj|BAB21127.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|12328467|dbj|BAB21127.1| putative retrotransposon RIRE1 poly protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914500|ref|NP_918597.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|34914500|ref|NP_918597.1| putative retrovirus-related pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|34900652|ref|NP_911672.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|34900652|ref|NP_911672.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|48475093|gb|AAT44162.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| putative polyprotein [Oryza sativa Japonica Group] |
| Match: gi|34913798|ref|NP_918246.1| |
score: 39.28 |
e-value: 4e-25 |
Identity: 36% |
Span: 150bp (12.2%) |
Frame: -3 |
| gi|34913798|ref|NP_918246.1| putative polyprotein from transposon TNT 1-94 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|34913882|ref|NP_918288.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|34913882|ref|NP_918288.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|20161774|dbj|BAB90690.1... |
| Match: gi|30089754|gb|AAP20858.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|30089754|gb|AAP20858.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34913798|ref|NP_918246.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|34913798|ref|NP_918246.1| putative polyprotein from transposon TNT 1-94 [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|34900652|ref|NP_911672.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|34900652|ref|NP_911672.1| putative retrovirus-related pol polyprotein from transposon TNT 1-94 [Oryza sativa (japo... |
| Match: gi|38347007|emb|CAE02261.2| |
score: 38.89 |
e-value: 3.1e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|38347007|emb|CAE02261.2| OSJNBb0058J09.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34903244|ref|NP_912969.1| |
score: 38.89 |
e-value: 1.8e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|34903244|ref|NP_912969.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|6539553|dbj|BAA88170... |
| Match: gi|38346634|emb|CAD40744.2| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|38346634|emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|48475093|gb|AAT44162.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| putative polyprotein [Oryza sativa Japonica Group] |
| Match: gi|38346534|emb|CAE04541.2| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|38346534|emb|CAE04541.2| OSJNBa0040D17.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535968|ref|NP_922286.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|37535968|ref|NP_922286.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|15144313|gb|AAK84454.1|... |
| Match: gi|32488578|emb|CAE03086.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|32488578|emb|CAE03086.1| OSJNBa0017B10.1 [Oryza sativa (japonica cultivar-group)] gi|38345937|emb|CAD41412.2| OSJN... |
| Match: gi|12328467|dbj|BAB21127.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|12328467|dbj|BAB21127.1| putative retrotransposon RIRE1 poly protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|24431600|gb|AAN61480.1| |
score: 38.89 |
e-value: 5e-26 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|24431600|gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34914500|ref|NP_918597.1| |
score: 38.89 |
e-value: 4e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|34914500|ref|NP_918597.1| putative retrovirus-related pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|... |
| Match: gi|38344705|emb|CAE05247.2| |
score: 38.89 |
e-value: 3.2e-25 |
Identity: 40.38% |
Span: 156bp (12.7%) |
Frame: -1 |
| gi|38344705|emb|CAE05247.2| OSJNBb0115I09.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38344705|emb|CAE05247.2| |
score: 38.51 |
e-value: 3.2e-25 |
Identity: 40.35% |
Span: 162bp (13.1%) |
Frame: -2 |
| gi|38344705|emb|CAE05247.2| OSJNBb0115I09.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7444451|pir||T10728 |
score: 38.12 |
e-value: 8e-29 |
Identity: 38.57% |
Span: 198bp (16.1%) |
Frame: -2 |
| gi|7444451|pir||T10728 probable gag/pol polyprotein - long-staminate rice retrotransposon retrofit gi|2586082|gb|AAB8... |
| Match: gi|7444421|pir||A71444 |
score: 38.12 |
e-value: 3.7e-29 |
Identity: 37.29% |
Span: 168bp (13.6%) |
Frame: -2 |
| gi|7444421|pir||A71444 probable LTR retrotransposon - Arabidopsis thaliana gi|2245104|emb|CAB10526.1| retrotransposon... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 37.35 |
e-value: 1e-32 |
Identity: 40.68% |
Span: 168bp (13.6%) |
Frame: -2 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 37.35 |
e-value: 4.9e-32 |
Identity: 40.68% |
Span: 168bp (13.6%) |
Frame: -2 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|34907752|ref|NP_915223.1| |
score: 36.96 |
e-value: 1.7e-28 |
Identity: 38.57% |
Span: 198bp (16.1%) |
Frame: -2 |
| gi|34907752|ref|NP_915223.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza sativa (japonica culti... |
| Match: gi|25301673|pir||F96509 |
score: 36.58 |
e-value: 8.2e-28 |
Identity: 32.5% |
Span: 207bp (16.8%) |
Frame: -2 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|30103001|gb|AAP21414.1| |
score: 26.56 |
e-value: 1e-32 |
Identity: 52.38% |
Span: 63bp (5.1%) |
Frame: -3 |
| putative polyprotein [Oryza sativa Japonica Group] >gi108711651|gb|ABF99446.1| retrotransposon protein, putative, unc... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 26.56 |
e-value: 4.9e-32 |
Identity: 52.38% |
Span: 63bp (5.1%) |
Frame: -3 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
|
| 623 lower scoring hits censored -- only 100 best hits are stored. |
