| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|76573357|gb|ABA46783.1| |
score: 326 |
e-value: 1e-87 |
Identity: 100% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Solanum tuberosum] |
| Match: gi|78191414|gb|ABB29928.1| |
score: 317 |
e-value: 6e-85 |
Identity: 97.42% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Solanum tuberosum] |
| Match: gi|78191408|gb|ABB29925.1| |
score: 315 |
e-value: 2e-84 |
Identity: 96.77% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Solanum tuberosum] |
| Match: gi|224116756|ref|XP_002317384.1| |
score: 307 |
e-value: 5e-82 |
Identity: 94.19% |
Span: 465bp (69.9%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi118483631|gb|ABK93710.1| unknown [Populus trichocarpa] >gi|222860449|gb|EE... |
| Match: gi|118482586|gb|ABK93213.1| |
score: 306 |
e-value: 1e-81 |
Identity: 94.19% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Populus trichocarpa] >gi118485561|gb|ABK94632.1| unknown [Populus trichocarpa] |
| Match: gi|247421866|gb|ACS96446.1| |
score: 304 |
e-value: 6e-81 |
Identity: 93.55% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18a [Jatropha curcas] |
| Match: gi|224078998|ref|XP_002305712.1| |
score: 303 |
e-value: 7e-81 |
Identity: 93.55% |
Span: 465bp (69.9%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi224079000|ref|XP_002305713.1| predicted protein [Populus trichocarpa] >gi|... |
| Match: gi|255628313|gb|ACU14501.1| |
score: 303 |
e-value: 1e-80 |
Identity: 93.55% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|225463470|ref|XP_002276512.1| |
score: 303 |
e-value: 7e-81 |
Identity: 92.9% |
Span: 465bp (69.9%) |
Frame: 2 |
| PREDICTED: similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome isoform 1 [Vitis vin... |
| Match: gi|225463466|ref|XP_002276260.1| |
score: 302 |
e-value: 2e-80 |
Identity: 92.26% |
Span: 465bp (69.9%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147769189|emb|CAN71860.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|224062663|ref|XP_002300869.1| |
score: 301 |
e-value: 3e-80 |
Identity: 92.26% |
Span: 465bp (69.9%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi118481342|gb|ABK92614.1| unknown [Populus trichocarpa] >gi|222842595|gb|EE... |
| Match: gi|225462960|ref|XP_002268750.1| |
score: 301 |
e-value: 4e-80 |
Identity: 92.86% |
Span: 462bp (69.5%) |
Frame: 2 |
| PREDICTED: similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome [Vitis vinifera] >gi... |
| Match: gi|255575183|ref|XP_002528496.1| |
score: 301 |
e-value: 5e-80 |
Identity: 91.61% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18a, putative [Ricinus communis] >gi223532105|gb|EEF33913.1| 60S ribosomal protein L18a, putat... |
| Match: gi|21362874|sp|Q9ATF5.1|RL18A_CASSA |
score: 300 |
e-value: 8e-80 |
Identity: 92.86% |
Span: 462bp (69.5%) |
Frame: 2 |
| RecName: Full=60S ribosomal protein L18a >gi13430184|gb|AAK25759.1|AF334839_1 ribosomal protein L18a [Castanea sativa] |
| Match: gi|255629253|gb|ACU14971.1| |
score: 300 |
e-value: 6e-80 |
Identity: 92.26% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|118484993|gb|ABK94361.1| |
score: 299 |
e-value: 2e-79 |
Identity: 91.61% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Populus trichocarpa] |
| Match: gi|255627767|gb|ACU14228.1| |
score: 299 |
e-value: 1e-79 |
Identity: 91.61% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|255631354|gb|ACU16044.1| |
score: 298 |
e-value: 3e-79 |
Identity: 91.61% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|225463468|ref|XP_002276545.1| |
score: 297 |
e-value: 5e-79 |
Identity: 92.81% |
Span: 459bp (69.0%) |
Frame: 2 |
| PREDICTED: similar to RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome isoform 2 [Vitis vin... |
| Match: gi|15231888|ref|NP_188078.1| |
score: 296 |
e-value: 1e-78 |
Identity: 92.11% |
Span: 456bp (68.6%) |
Frame: 2 |
| 60S ribosomal protein L18A (RPL18aC) [Arabidopsis thaliana] >gi21362875|sp|Q9LUD4.1|R18A3_ARATH RecName: Full=60S rib... |
| Match: gi|15226755|ref|NP_180995.1| |
score: 296 |
e-value: 1e-78 |
Identity: 90.97% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18A (RPL18aB) [Arabidopsis thaliana] >gi21431842|sp|P51418.2|R18A2_ARATH RecName: Full=60S rib... |
| Match: gi|217072984|gb|ACJ84852.1| |
score: 295 |
e-value: 2e-78 |
Identity: 91.61% |
Span: 465bp (69.9%) |
Frame: 2 |
| unknown [Medicago truncatula] |
| Match: gi|76573357|gb|ABA46783.1| |
score: 24.6 |
e-value: 1e-87 |
Identity: 37.04% |
Span: 81bp (12.2%) |
Frame: 1 |
| unknown [Solanum tuberosum] |
| Match: gi|255628313|gb|ACU14501.1| |
score: 24.6 |
e-value: 1e-80 |
Identity: 37.04% |
Span: 81bp (12.2%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|78191414|gb|ABB29928.1| |
score: 24.6 |
e-value: 6e-85 |
Identity: 37.04% |
Span: 81bp (12.2%) |
Frame: 1 |
| unknown [Solanum tuberosum] |
|
| 228 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At3G14600.1 |
score: 296 |
e-value: 7e-81 |
Identity: 92.11% |
Span: 456bp (68.6%) |
Frame: 2 |
| 60S ribosomal protein L18A (RPL18aC) | chr3:4910780-4911940 FORWARD |
| Match: At2G34480.1 |
score: 296 |
e-value: 9e-81 |
Identity: 90.97% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18A (RPL18aB) | chr2:14539995-14541240 REVERSE |
| Match: At1G29965.1 |
score: 287 |
e-value: 4e-78 |
Identity: 88.39% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18A (RPL18aA) | chr1:10498442-10499357 REVERSE |
| Match: At1G29970.2 |
score: 285 |
e-value: 1e-77 |
Identity: 91.28% |
Span: 447bp (67.2%) |
Frame: 2 |
| Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1); structural constituent of ribosome | chr1:10498442-105012... |
|
| swissprot [blastx] | Showing best 17 hits recorded |
| Match: Q9ATF5 |
score: 300 |
e-value: 5e-81 |
Identity: 92.86% |
Span: 462bp (69.5%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1 |
| Match: Q9LUD4 |
score: 296 |
e-value: 8e-80 |
Identity: 92.11% |
Span: 456bp (68.6%) |
Frame: 2 |
| 60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1 |
| Match: P51418 |
score: 296 |
e-value: 1e-79 |
Identity: 90.97% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2 |
| Match: Q943F3 |
score: 289 |
e-value: 1e-77 |
Identity: 88.39% |
Span: 465bp (69.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1 |
| Match: Q54MK8 |
score: 186 |
e-value: 9e-47 |
Identity: 59.18% |
Span: 441bp (66.3%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Dictyostelium discoideum GN=rpl18a PE=3 SV=2 |
| Match: P41093 |
score: 184 |
e-value: 4e-46 |
Identity: 55.78% |
Span: 441bp (66.3%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Drosophila melanogaster GN=RpL18A PE=1 SV=1 |
| Match: Q02543 |
score: 184 |
e-value: 6e-46 |
Identity: 56.85% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2 |
| Match: Q3T003 |
score: 184 |
e-value: 6e-46 |
Identity: 56.85% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1 |
| Match: Q8WQI7 |
score: 183 |
e-value: 1e-45 |
Identity: 54.11% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Spodoptera frugiperda GN=RpL18A PE=2 SV=1 |
| Match: P62718 |
score: 183 |
e-value: 1e-45 |
Identity: 56.85% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1 |
| Match: P62717 |
score: 183 |
e-value: 1e-45 |
Identity: 56.85% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1 |
| Match: O44480 |
score: 181 |
e-value: 3e-45 |
Identity: 54.42% |
Span: 441bp (66.3%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Caenorhabditis elegans GN=rpl-20 PE=2 SV=2 |
| Match: Q7ZWJ4 |
score: 180 |
e-value: 8e-45 |
Identity: 54.79% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1 |
| Match: Q90YU9 |
score: 177 |
e-value: 5e-44 |
Identity: 54.11% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1 |
| Match: O57561 |
score: 169 |
e-value: 1e-41 |
Identity: 52.05% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1 |
| Match: P0C2I0 |
score: 167 |
e-value: 4e-41 |
Identity: 52.35% |
Span: 444bp (66.8%) |
Frame: 2 |
| 60S ribosomal protein L20 OS=Saccharomyces cerevisiae GN=RPL20A PE=1 SV=2 |
| Match: P05732 |
score: 160 |
e-value: 7e-39 |
Identity: 52.38% |
Span: 438bp (65.9%) |
Frame: 2 |
| 60S ribosomal protein L20 OS=Schizosaccharomyces pombe GN=rpl20a PE=1 SV=3 |
|
