genbank/nr [blastx] | Showing best 25 hits recorded |
Match: gi|255584772|ref|XP_002533104.1| |
score: 196 |
e-value: 7e-48 |
Identity: 91.34% |
Span: 381bp (27.7%) |
Frame: -2 |
histone h2a, putative [Ricinus communis] >gi223527095|gb|EEF29276.1| histone h2a, putative [Ricinus communis] |
Match: gi|255584768|ref|XP_002533102.1| |
score: 196 |
e-value: 7e-48 |
Identity: 91.34% |
Span: 381bp (27.7%) |
Frame: -2 |
histone h2a, putative [Ricinus communis] >gi223527093|gb|EEF29274.1| histone h2a, putative [Ricinus communis] |
Match: gi|225439749|ref|XP_002274570.1| |
score: 196 |
e-value: 7e-48 |
Identity: 95.24% |
Span: 378bp (27.5%) |
Frame: -2 |
PREDICTED: hypothetical protein [Vitis vinifera] >gi147769777|emb|CAN63391.1| hypothetical protein [Vitis vinifera] |
Match: gi|224087383|ref|XP_002308145.1| |
score: 193 |
e-value: 5e-47 |
Identity: 92.91% |
Span: 381bp (27.7%) |
Frame: -2 |
histone 2 [Populus trichocarpa] >gi222854121|gb|EEE91668.1| histone 2 [Populus trichocarpa] |
Match: gi|118485435|gb|ABK94574.1| |
score: 193 |
e-value: 5e-47 |
Identity: 92.91% |
Span: 381bp (27.7%) |
Frame: -2 |
unknown [Populus trichocarpa] |
Match: gi|225435042|ref|XP_002284305.1| |
score: 193 |
e-value: 5e-47 |
Identity: 92.91% |
Span: 381bp (27.7%) |
Frame: -2 |
PREDICTED: hypothetical protein [Vitis vinifera] >gi147841321|emb|CAN60181.1| hypothetical protein [Vitis vinifera] >... |
Match: gi|255640946|gb|ACU20753.1| |
score: 191 |
e-value: 2e-46 |
Identity: 91.34% |
Span: 381bp (27.7%) |
Frame: -2 |
unknown [Glycine max] |
Match: gi|255626369|gb|ACU13529.1| |
score: 191 |
e-value: 2e-46 |
Identity: 91.34% |
Span: 381bp (27.7%) |
Frame: -2 |
unknown [Glycine max] |
Match: gi|255628941|gb|ACU14815.1| |
score: 191 |
e-value: 2e-46 |
Identity: 91.34% |
Span: 381bp (27.7%) |
Frame: -2 |
unknown [Glycine max] |
Match: gi|255647574|gb|ACU24250.1| |
score: 187 |
e-value: 3e-45 |
Identity: 92.13% |
Span: 381bp (27.7%) |
Frame: -2 |
unknown [Glycine max] |
Match: gi|108936001|sp|Q2HU68.1|H2A1_MEDTR |
score: 185 |
e-value: 1e-44 |
Identity: 89.84% |
Span: 384bp (27.9%) |
Frame: -2 |
RecName: Full=Probable histone H2A.1 >gi87240419|gb|ABD32277.1| Histone H2A; Histone-fold [Medicago truncatula] |
Match: gi|62286683|sp|Q9M531.1|H2A_EUPES |
score: 185 |
e-value: 1e-44 |
Identity: 88.55% |
Span: 381bp (27.7%) |
Frame: -2 |
RecName: Full=Histone H2A >gi7649159|gb|AAF65769.1|AF242311_1 histone H2A [Euphorbia esula] |
Match: gi|47026912|gb|AAT08677.1| |
score: 184 |
e-value: 2e-44 |
Identity: 87.5% |
Span: 384bp (27.9%) |
Frame: -2 |
histone H2A [Hyacinthus orientalis] |
Match: gi|47026919|gb|AAT08680.1| |
score: 183 |
e-value: 4e-44 |
Identity: 87.5% |
Span: 384bp (27.9%) |
Frame: -2 |
histone H2A [Hyacinthus orientalis] |
Match: gi|122007|sp|P19177.1|H2A_PETCR |
score: 183 |
e-value: 5e-44 |
Identity: 89.15% |
Span: 384bp (27.9%) |
Frame: -2 |
RecName: Full=Histone H2A >gi20448|emb|CAA37828.1| unnamed protein product [Petroselinum crispum] |
Match: gi|6009909|dbj|BAA85117.1| |
score: 182 |
e-value: 1e-43 |
Identity: 88.98% |
Span: 381bp (27.7%) |
Frame: -2 |
histone H2A-like protein [Solanum melongena] |
Match: gi|108936002|sp|Q2HU65.1|H2A2_MEDTR |
score: 181 |
e-value: 2e-43 |
Identity: 85.5% |
Span: 384bp (27.9%) |
Frame: -2 |
RecName: Full=Probable histone H2A.2 >gi87240422|gb|ABD32280.1| Histone H2A; Histone-fold [Medicago truncatula] |
Match: gi|195606592|gb|ACG25126.1| |
score: 180 |
e-value: 4e-43 |
Identity: 85.27% |
Span: 384bp (27.9%) |
Frame: -2 |
histone H2A [Zea mays] >gi195628877|gb|ACG36235.1| histone H2A [Zea mays] >gi|195629440|gb|ACG36361.1| histone H2A [Z... |
Match: gi|195605264|gb|ACG24462.1| |
score: 180 |
e-value: 4e-43 |
Identity: 85.27% |
Span: 384bp (27.9%) |
Frame: -2 |
histone H2A [Zea mays] |
Match: gi|194698468|gb|ACF83318.1| |
score: 179 |
e-value: 5e-43 |
Identity: 84.09% |
Span: 384bp (27.9%) |
Frame: -2 |
unknown [Zea mays] >gi195619466|gb|ACG31563.1| histone H2A [Zea mays] >gi|195652861|gb|ACG45898.1| histone H2A [Zea m... |
Match: gi|15241857|ref|NP_195876.1| |
score: 179 |
e-value: 7e-43 |
Identity: 86.82% |
Span: 381bp (27.7%) |
Frame: -2 |
HTA12; DNA binding [Arabidopsis thaliana] >gi75311717|sp|Q9LZ46.1|H2A4_ARATH RecName: Full=Probable histone H2A.4; Al... |
Match: gi|121982|sp|P02277.1|H2A3_WHEAT |
score: 178 |
e-value: 1e-42 |
Identity: 82.44% |
Span: 384bp (27.9%) |
Frame: -2 |
RecName: Full=Histone H2A.2.2 |
Match: gi|242049962|ref|XP_002462725.1| |
score: 178 |
e-value: 2e-42 |
Identity: 84.85% |
Span: 384bp (27.9%) |
Frame: -2 |
hypothetical protein SORBIDRAFT_02g030950 [Sorghum bicolor] >gi241926102|gb|EER99246.1| hypothetical protein SORBIDRA... |
Match: gi|242032225|ref|XP_002463507.1| |
score: 178 |
e-value: 2e-42 |
Identity: 86.82% |
Span: 384bp (27.9%) |
Frame: -2 |
hypothetical protein SORBIDRAFT_01g000950 [Sorghum bicolor] >gi241917361|gb|EER90505.1| hypothetical protein SORBIDRA... |
Match: gi|195622870|gb|ACG33265.1| |
score: 178 |
e-value: 2e-42 |
Identity: 83.33% |
Span: 384bp (27.9%) |
Frame: -2 |
histone H2A [Zea mays] |
|
225 lower scoring hits censored -- only 25 best hits are stored. |
arabidopsis/peptide [blastx] | Showing best 14 hits recorded |
Match: At5G02560.1 |
score: 179 |
e-value: 4e-45 |
Identity: 86.82% |
Span: 381bp (27.7%) |
Frame: -2 |
histone H2A, putative | chr5:575435-576454 FORWARD |
Match: At5G59870.1 |
score: 159 |
e-value: 4e-39 |
Identity: 78.74% |
Span: 363bp (26.4%) |
Frame: -2 |
histone H2A, putative | chr5:24132831-24133370 REVERSE |
Match: At5G27670.1 |
score: 156 |
e-value: 3e-38 |
Identity: 78.91% |
Span: 384bp (27.9%) |
Frame: -2 |
histone H2A, putative | chr5:9792810-9793368 REVERSE |
Match: At1G51060.1 |
score: 135 |
e-value: 8e-32 |
Identity: 79.44% |
Span: 321bp (23.3%) |
Frame: -2 |
histone H2A, putative | chr1:18930616-18931111 FORWARD |
Match: At1G08880.1 |
score: 134 |
e-value: 1e-31 |
Identity: 76.52% |
Span: 345bp (25.1%) |
Frame: -2 |
histone H2A, putative | chr1:2847147-2847679 REVERSE |
Match: At1G54690.1 |
score: 134 |
e-value: 1e-31 |
Identity: 76.52% |
Span: 345bp (25.1%) |
Frame: -2 |
histone H2A, putative | chr1:20418274-20418873 REVERSE |
Match: At4G27230.1 |
score: 132 |
e-value: 5e-31 |
Identity: 78.5% |
Span: 321bp (23.3%) |
Frame: -2 |
histone H2A, putative | chr4:13637521-13638331 REVERSE |
Match: At3G20670.1 |
score: 132 |
e-value: 7e-31 |
Identity: 78.5% |
Span: 321bp (23.3%) |
Frame: -2 |
histone H2A, putative | chr3:7229478-7229969 FORWARD |
Match: At5G54640.1 |
score: 131 |
e-value: 1e-30 |
Identity: 77.57% |
Span: 321bp (23.3%) |
Frame: -2 |
Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22213766-22214505 FORWARD |
Match: At1G52740.1 |
score: 79.3 |
e-value: 5e-15 |
Identity: 58.88% |
Span: 318bp (23.1%) |
Frame: -2 |
histone H2A, putative | chr1:19649077-19649889 FORWARD |
Match: At2G38810.2 |
score: 78.2 |
e-value: 1e-14 |
Identity: 58.49% |
Span: 315bp (22.9%) |
Frame: -2 |
histone H2A, putative | chr2:16226522-16227757 REVERSE |
Match: At2G38810.3 |
score: 78.2 |
e-value: 1e-14 |
Identity: 58.49% |
Span: 315bp (22.9%) |
Frame: -2 |
histone H2A, putative | chr2:16226522-16227757 REVERSE |
Match: At2G38810.1 |
score: 78.2 |
e-value: 1e-14 |
Identity: 58.49% |
Span: 315bp (22.9%) |
Frame: -2 |
histone H2A, putative | chr2:16226522-16227757 REVERSE |
Match: At3G54560.1 |
score: 77 |
e-value: 3e-14 |
Identity: 58.1% |
Span: 312bp (22.7%) |
Frame: -2 |
histone H2A.F/Z | chr3:20207510-20208444 FORWARD |
|
swissprot [blastx] | Showing best 25 hits recorded |
Match: Q2HU68 |
score: 185 |
e-value: 6e-46 |
Identity: 89.84% |
Span: 384bp (27.9%) |
Frame: -2 |
Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1 |
Match: Q9M531 |
score: 185 |
e-value: 8e-46 |
Identity: 88.55% |
Span: 381bp (27.7%) |
Frame: -2 |
Histone H2A OS=Euphorbia esula PE=2 SV=1 |
Match: P19177 |
score: 183 |
e-value: 3e-45 |
Identity: 89.15% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A OS=Petroselinum crispum PE=2 SV=1 |
Match: Q2HU65 |
score: 181 |
e-value: 1e-44 |
Identity: 85.5% |
Span: 384bp (27.9%) |
Frame: -2 |
Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1 |
Match: Q9LZ46 |
score: 179 |
e-value: 4e-44 |
Identity: 86.82% |
Span: 381bp (27.7%) |
Frame: -2 |
Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1 |
Match: P02277 |
score: 178 |
e-value: 7e-44 |
Identity: 82.44% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A.2.2 OS=Triticum aestivum PE=1 SV=1 |
Match: Q1S053 |
score: 178 |
e-value: 9e-44 |
Identity: 85.5% |
Span: 384bp (27.9%) |
Frame: -2 |
Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1 |
Match: P25470 |
score: 177 |
e-value: 2e-43 |
Identity: 83.59% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A.1 OS=Pisum sativum PE=2 SV=1 |
Match: Q75L11 |
score: 176 |
e-value: 4e-43 |
Identity: 85.83% |
Span: 378bp (27.5%) |
Frame: -2 |
Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2 |
Match: A2XZN0 |
score: 176 |
e-value: 4e-43 |
Identity: 85.83% |
Span: 378bp (27.5%) |
Frame: -2 |
Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2 |
Match: Q6L500 |
score: 176 |
e-value: 4e-43 |
Identity: 84.44% |
Span: 381bp (27.7%) |
Frame: -2 |
Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1 |
Match: A2Y5G8 |
score: 176 |
e-value: 4e-43 |
Identity: 84.44% |
Span: 381bp (27.7%) |
Frame: -2 |
Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1 |
Match: P40280 |
score: 174 |
e-value: 1e-42 |
Identity: 82.58% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A OS=Zea mays PE=2 SV=1 |
Match: Q94E96 |
score: 174 |
e-value: 1e-42 |
Identity: 84.21% |
Span: 384bp (27.9%) |
Frame: -2 |
Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1 |
Match: A2WQG7 |
score: 174 |
e-value: 1e-42 |
Identity: 84.21% |
Span: 384bp (27.9%) |
Frame: -2 |
Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1 |
Match: P02276 |
score: 174 |
e-value: 1e-42 |
Identity: 80.3% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A.2.1 OS=Triticum aestivum PE=1 SV=1 |
Match: P40281 |
score: 172 |
e-value: 5e-42 |
Identity: 82.81% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A.2 OS=Pisum sativum PE=2 SV=1 |
Match: P02275 |
score: 171 |
e-value: 9e-42 |
Identity: 82.17% |
Span: 381bp (27.7%) |
Frame: -2 |
Histone H2A.1 OS=Triticum aestivum GN=H2A-9 PE=1 SV=2 |
Match: P25469 |
score: 171 |
e-value: 9e-42 |
Identity: 86.82% |
Span: 384bp (27.9%) |
Frame: -2 |
Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1 |
Match: Q43213 |
score: 170 |
e-value: 2e-41 |
Identity: 81.89% |
Span: 381bp (27.7%) |
Frame: -2 |
Protein H2A.5 OS=Triticum aestivum GN=H2A-2 PE=2 SV=3 |
Match: Q43214 |
score: 166 |
e-value: 4e-40 |
Identity: 82.31% |
Span: 381bp (27.7%) |
Frame: -2 |
Protein H2A.6 OS=Triticum aestivum GN=H2A-3 PE=2 SV=3 |
Match: Q9FJE8 |
score: 159 |
e-value: 4e-38 |
Identity: 78.74% |
Span: 363bp (26.4%) |
Frame: -2 |
Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1 SV=1 |
Match: Q94F49 |
score: 156 |
e-value: 4e-37 |
Identity: 78.91% |
Span: 384bp (27.9%) |
Frame: -2 |
Probable histone H2A.5 OS=Arabidopsis thaliana GN=At5g27670 PE=1 SV=1 |
Match: P16865 |
score: 143 |
e-value: 3e-33 |
Identity: 80.36% |
Span: 336bp (24.4%) |
Frame: -2 |
Histone H2A-III OS=Volvox carteri PE=3 SV=1 |
Match: P16866 |
score: 142 |
e-value: 4e-33 |
Identity: 80.36% |
Span: 336bp (24.4%) |
Frame: -2 |
Histone H2A-IV OS=Volvox carteri PE=3 SV=1 |
|
213 lower scoring hits censored -- only 25 best hits are stored. |