| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225423909|ref|XP_002278845.1| |
score: 873 |
e-value: 0 |
Identity: 70.88% |
Span: 2055bp (72.5%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270239822|emb|CBI27055.1| |
score: 852 |
e-value: 0 |
Identity: 69.44% |
Span: 2055bp (72.5%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224111730|ref|XP_002315956.1| |
score: 800 |
e-value: 0 |
Identity: 66.14% |
Span: 2055bp (72.5%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222864996|gb|EEF02127.1| predicted protein [Populus trichocarpa] |
| Match: gi|30689268|ref|NP_173925.3| |
score: 707 |
e-value: 0 |
Identity: 58.6% |
Span: 2061bp (72.7%) |
Frame: 2 |
| PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator [Arabidopsis thaliana] >gi32478899|gb|AAO39425.1| ... |
| Match: gi|255576521|ref|XP_002529152.1| |
score: 584 |
e-value: 5e-165 |
Identity: 66.6% |
Span: 1572bp (55.4%) |
Frame: 2 |
| conserved hypothetical protein [Ricinus communis] >gi223531431|gb|EEF33265.1| conserved hypothetical protein [Ricinus... |
| Match: gi|145324014|ref|NP_001077596.1| |
score: 582 |
e-value: 1e-163 |
Identity: 57.09% |
Span: 1743bp (61.5%) |
Frame: 2 |
| PFT1 (PHYTOCHROME AND FLOWERING TIME 1); transcription coactivator [Arabidopsis thaliana] |
| Match: gi|115478458|ref|NP_001062824.1| |
score: 579 |
e-value: 7e-163 |
Identity: 49.93% |
Span: 2049bp (72.2%) |
Frame: 2 |
| Os09g0306700 [Oryza sativa (japonica cultivar-group)] >gi51091708|dbj|BAD36509.1| putative SMA-9 class B [Oryza sativ... |
| Match: gi|218201884|gb|EEC84311.1| |
score: 558 |
e-value: 1e-156 |
Identity: 49.07% |
Span: 2055bp (72.5%) |
Frame: 2 |
| hypothetical protein OsI_30806 [Oryza sativa Indica Group] |
| Match: gi|222641283|gb|EEE69415.1| |
score: 504 |
e-value: 2e-140 |
Identity: 46% |
Span: 1953bp (68.9%) |
Frame: 2 |
| hypothetical protein OsJ_28785 [Oryza sativa Japonica Group] |
| Match: gi|224099341|ref|XP_002311445.1| |
score: 390 |
e-value: 5e-106 |
Identity: 64.43% |
Span: 1119bp (39.5%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222851265|gb|EEE88812.1| predicted protein [Populus trichocarpa] |
| Match: gi|12321507|gb|AAG50810.1|AC079281_12 |
score: 380 |
e-value: 5e-103 |
Identity: 57.36% |
Span: 1161bp (40.9%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|168051357|ref|XP_001778121.1| |
score: 344 |
e-value: 4e-92 |
Identity: 37.73% |
Span: 2052bp (72.4%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162670443|gb|EDQ57011.1| predicted protein [Physcomitrella... |
| Match: gi|14190783|gb|AAF65166.2|AF166494_1 |
score: 290 |
e-value: 9e-76 |
Identity: 83% |
Span: 597bp (21.1%) |
Frame: 2 |
| putative phloem transcription factor M1 [Apium graveolens] |
| Match: gi|61611689|gb|AAX47175.1| |
score: 192 |
e-value: 2e-46 |
Identity: 54.44% |
Span: 753bp (26.6%) |
Frame: 2 |
| PHYTOCHROME AND FLOWERING TIME 1 [Pisum sativum] |
| Match: gi|148907978|gb|ABR17109.1| |
score: 187 |
e-value: 5e-45 |
Identity: 62.42% |
Span: 459bp (16.2%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|168051429|ref|XP_001778157.1| |
score: 143 |
e-value: 1e-31 |
Identity: 68.57% |
Span: 315bp (11.1%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162670479|gb|EDQ57047.1| predicted protein [Physcomitrella... |
| Match: gi|270226687|emb|CBI15421.1| |
score: 115 |
e-value: 3e-23 |
Identity: 53.23% |
Span: 369bp (13.0%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255678754|dbj|BAF24738.2| |
score: 104 |
e-value: 5e-20 |
Identity: 53.41% |
Span: 264bp (9.3%) |
Frame: 2 |
| Os09g0306700 [Oryza sativa Japonica Group] |
| Match: gi|168051429|ref|XP_001778157.1| |
score: 100 |
e-value: 1e-18 |
Identity: 47.26% |
Span: 399bp (14.1%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162670479|gb|EDQ57047.1| predicted protein [Physcomitrella... |
| Match: gi|224099339|ref|XP_002311444.1| |
score: 95.9 |
e-value: 2e-17 |
Identity: 72.88% |
Span: 177bp (6.2%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222851264|gb|EEE88811.1| predicted protein [Populus trichocarpa] |
| Match: gi|156717452|ref|NP_001096266.1| |
score: 86.3 |
e-value: 2e-14 |
Identity: 25.6% |
Span: 981bp (34.6%) |
Frame: 2 |
| mediator complex subunit 25 [Xenopus (Silurana) tropicalis] >gi158705954|sp|A4IHD9.1|MED25_XENTR RecName: Full=Mediat... |
| Match: gi|147907042|ref|NP_001085778.1| |
score: 85.9 |
e-value: 3e-14 |
Identity: 24.18% |
Span: 1083bp (38.2%) |
Frame: 2 |
| mediator complex subunit 25 [Xenopus laevis] >gi82184340|sp|Q6GP15.1|MED25_XENLA RecName: Full=Mediator of RNA polyme... |
| Match: gi|149056013|gb|EDM07444.1| |
score: 83.2 |
e-value: 2e-13 |
Identity: 24.82% |
Span: 1155bp (40.7%) |
Frame: 2 |
| mediator of RNA polymerase II transcription, subunit 25 homolog (yeast) (predicted), isoform CRA_b [Rattus norvegicus] |
| Match: gi|148690821|gb|EDL22768.1| |
score: 80.9 |
e-value: 8e-13 |
Identity: 25.25% |
Span: 1161bp (40.9%) |
Frame: 2 |
| mediator of RNA polymerase II transcription, subunit 25 homolog (yeast), isoform CRA_a [Mus musculus] |
| Match: gi|255576521|ref|XP_002529152.1| |
score: 22.3 |
e-value: 5e-165 |
Identity: 44.44% |
Span: 81bp (2.9%) |
Frame: 3 |
| conserved hypothetical protein [Ricinus communis] >gi223531431|gb|EEF33265.1| conserved hypothetical protein [Ricinus... |
|
| 27 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G25540.1 |
score: 707 |
e-value: 0 |
Identity: 58.6% |
Span: 2061bp (72.7%) |
Frame: 2 |
| Symbols: PFT1 | PFT1 (PHYTOCHROME AND FLOWERING TIME 1) | chr1:8969379-8974433 REVERSE |
| Match: At1G25540.2 |
score: 582 |
e-value: 6e-166 |
Identity: 57.09% |
Span: 1743bp (61.5%) |
Frame: 2 |
| Symbols: PFT1 | PFT1 (PHYTOCHROME AND FLOWERING TIME 1) | chr1:8969379-8973288 REVERSE |
|
| swissprot [blastx] | Showing best 6 hits recorded |
| Match: A4IHD9 |
score: 86.3 |
e-value: 1e-15 |
Identity: 25.6% |
Span: 981bp (34.6%) |
Frame: 2 |
| Mediator of RNA polymerase II transcription subunit 25 OS=Xenopus tropicalis GN=med25 PE=2 SV=1 |
| Match: Q6GP15 |
score: 85.9 |
e-value: 1e-15 |
Identity: 24.18% |
Span: 1083bp (38.2%) |
Frame: 2 |
| Mediator of RNA polymerase II transcription subunit 25 OS=Xenopus laevis GN=med25 PE=2 SV=1 |
| Match: Q8VCB2 |
score: 80.9 |
e-value: 5e-14 |
Identity: 25.25% |
Span: 1161bp (40.9%) |
Frame: 2 |
| Mediator of RNA polymerase II transcription subunit 25 OS=Mus musculus GN=Med25 PE=1 SV=1 |
| Match: Q71SY5 |
score: 80.9 |
e-value: 5e-14 |
Identity: 25.06% |
Span: 1155bp (40.7%) |
Frame: 2 |
| Mediator of RNA polymerase II transcription subunit 25 OS=Homo sapiens GN=MED25 PE=1 SV=2 |
| Match: Q6PEH8 |
score: 78.6 |
e-value: 2e-13 |
Identity: 23.69% |
Span: 1086bp (38.3%) |
Frame: 2 |
| Mediator of RNA polymerase II transcription subunit 25 OS=Danio rerio GN=med25 PE=2 SV=1 |
| Match: A2VE44 |
score: 76.6 |
e-value: 9e-13 |
Identity: 22.66% |
Span: 975bp (34.4%) |
Frame: 2 |
| Mediator of RNA polymerase II transcription subunit 25 OS=Bos taurus GN=MED25 PE=2 SV=1 |
|
