| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224085557|ref|XP_002307619.1| |
score: 221 |
e-value: 3e-56 |
Identity: 89.31% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi118486969|gb|ABK95317.1| unknown [Populus trichocarpa] >gi|222857068|gb|EEE94615.1... |
| Match: gi|255576964|ref|XP_002529367.1| |
score: 220 |
e-value: 5e-56 |
Identity: 88.55% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223531187|gb|EEF33034.1| histone h2a, putative [Ricinus communis] |
| Match: gi|225437178|ref|XP_002281266.1| |
score: 219 |
e-value: 1e-55 |
Identity: 90.62% |
Span: 384bp (70.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270235938|emb|CBI25061.1| unnamed protein product [Vitis vinifera] |
| Match: gi|115450897|ref|NP_001049049.1| |
score: 219 |
e-value: 1e-55 |
Identity: 90.84% |
Span: 393bp (72.1%) |
Frame: 1 |
| Os03g0162200 [Oryza sativa (japonica cultivar-group)] >gi75299926|sp|Q8H7Y8.1|H2AV1_ORYSJ RecName: Full=Probable hist... |
| Match: gi|255628411|gb|ACU14550.1| |
score: 218 |
e-value: 3e-55 |
Identity: 87.79% |
Span: 393bp (72.1%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255629416|gb|ACU15054.1| |
score: 218 |
e-value: 3e-55 |
Identity: 87.79% |
Span: 393bp (72.1%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|226532207|ref|NP_001141633.1| |
score: 218 |
e-value: 3e-55 |
Identity: 89.31% |
Span: 393bp (72.1%) |
Frame: 1 |
| hypothetical protein LOC100273753 [Zea mays] >gi242065684|ref|XP_002454131.1| hypothetical protein SORBIDRAFT_04g0251... |
| Match: gi|224062285|ref|XP_002300810.1| |
score: 217 |
e-value: 5e-55 |
Identity: 89.31% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi118482024|gb|ABK92943.1| unknown [Populus trichocarpa] >gi|222842536|gb|EEE80083.1... |
| Match: gi|116781203|gb|ABK22002.1| |
score: 216 |
e-value: 9e-55 |
Identity: 85.5% |
Span: 393bp (72.1%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|15232536|ref|NP_191019.1| |
score: 215 |
e-value: 2e-54 |
Identity: 90.6% |
Span: 351bp (64.4%) |
Frame: 1 |
| HTA11; DNA binding [Arabidopsis thaliana] >gi75277395|sp|O23628.1|H2AV1_ARATH RecName: Full=Histone H2A variant 1; Al... |
| Match: gi|255628199|gb|ACU14444.1| |
score: 214 |
e-value: 3e-54 |
Identity: 87.02% |
Span: 393bp (72.1%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255630786|gb|ACU15754.1| |
score: 214 |
e-value: 3e-54 |
Identity: 93.1% |
Span: 348bp (63.9%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|115455263|ref|NP_001051232.1| |
score: 214 |
e-value: 3e-54 |
Identity: 89.31% |
Span: 393bp (72.1%) |
Frame: 1 |
| Os03g0743400 [Oryza sativa (japonica cultivar-group)] >gi75297915|sp|Q84MP7.1|H2AV3_ORYSJ RecName: Full=Probable hist... |
| Match: gi|219362481|ref|NP_001136523.1| |
score: 214 |
e-value: 5e-54 |
Identity: 88.55% |
Span: 393bp (72.1%) |
Frame: 1 |
| hypothetical protein LOC100216638 [Zea mays] >gi219363539|ref|NP_001136445.1| hypothetical protein LOC100216551 [Zea ... |
| Match: gi|255553037|ref|XP_002517561.1| |
score: 213 |
e-value: 6e-54 |
Identity: 83.97% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223543193|gb|EEF44725.1| histone h2a, putative [Ricinus communis] |
| Match: gi|224143081|ref|XP_002324843.1| |
score: 213 |
e-value: 6e-54 |
Identity: 92.31% |
Span: 351bp (64.4%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi222866277|gb|EEF03408.1| histone 2 [Populus trichocarpa] |
| Match: gi|255627361|gb|ACU14025.1| |
score: 213 |
e-value: 8e-54 |
Identity: 91.45% |
Span: 351bp (64.4%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255628201|gb|ACU14445.1| |
score: 213 |
e-value: 8e-54 |
Identity: 86.26% |
Span: 393bp (72.1%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|225430153|ref|XP_002284738.1| |
score: 213 |
e-value: 8e-54 |
Identity: 92.31% |
Span: 351bp (64.4%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270231644|emb|CBI20969.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224092416|ref|XP_002309600.1| |
score: 212 |
e-value: 1e-53 |
Identity: 91.45% |
Span: 351bp (64.4%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi224092420|ref|XP_002309601.1| histone 2 [Populus trichocarpa] >gi|118488791|gb|ABK... |
| Match: gi|195607344|gb|ACG25502.1| |
score: 212 |
e-value: 2e-53 |
Identity: 87.79% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone H2A variant 3 [Zea mays] |
| Match: gi|168063596|ref|XP_001783756.1| |
score: 211 |
e-value: 2e-53 |
Identity: 92.31% |
Span: 351bp (64.4%) |
Frame: 1 |
| histone 2A variant [Physcomitrella patens subsp. patens] >gi162664699|gb|EDQ51408.1| histone 2A variant [Physcomitrel... |
| Match: gi|225442801|ref|XP_002285266.1| |
score: 211 |
e-value: 2e-53 |
Identity: 89.74% |
Span: 351bp (64.4%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147787162|emb|CAN64650.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|115482036|ref|NP_001064611.1| |
score: 211 |
e-value: 3e-53 |
Identity: 87.79% |
Span: 393bp (72.1%) |
Frame: 1 |
| Os10g0418000 [Oryza sativa (japonica cultivar-group)] >gi75303612|sp|Q8S857.1|H2AV2_ORYSJ RecName: Full=Probable hist... |
| Match: gi|255629422|gb|ACU15057.1| |
score: 211 |
e-value: 4e-53 |
Identity: 85.5% |
Span: 393bp (72.1%) |
Frame: 1 |
| unknown [Glycine max] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 15 hits recorded |
| Match: At3G54560.1 |
score: 215 |
e-value: 1e-56 |
Identity: 90.6% |
Span: 351bp (64.4%) |
Frame: 1 |
| histone H2A.F/Z | chr3:20207510-20208444 FORWARD |
| Match: At2G38810.2 |
score: 209 |
e-value: 6e-55 |
Identity: 85.5% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.3 |
score: 209 |
e-value: 6e-55 |
Identity: 85.5% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.1 |
score: 209 |
e-value: 6e-55 |
Identity: 85.5% |
Span: 393bp (72.1%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At1G52740.1 |
score: 209 |
e-value: 8e-55 |
Identity: 88.03% |
Span: 351bp (64.4%) |
Frame: 1 |
| histone H2A, putative | chr1:19649077-19649889 FORWARD |
| Match: At4G13570.1 |
score: 139 |
e-value: 8e-34 |
Identity: 76.92% |
Span: 273bp (50.1%) |
Frame: 1 |
| histone H2A, putative | chr4:7884512-7885660 FORWARD |
| Match: At5G02560.1 |
score: 124 |
e-value: 3e-29 |
Identity: 61.06% |
Span: 336bp (61.7%) |
Frame: 1 |
| histone H2A, putative | chr5:575435-576454 FORWARD |
| Match: At1G08880.1 |
score: 123 |
e-value: 8e-29 |
Identity: 64.76% |
Span: 312bp (57.2%) |
Frame: 1 |
| histone H2A, putative | chr1:2847147-2847679 REVERSE |
| Match: At5G54640.1 |
score: 122 |
e-value: 1e-28 |
Identity: 63.89% |
Span: 321bp (58.9%) |
Frame: 1 |
| Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22213766-22214505 FORWARD |
| Match: At4G27230.1 |
score: 122 |
e-value: 1e-28 |
Identity: 63.89% |
Span: 321bp (58.9%) |
Frame: 1 |
| histone H2A, putative | chr4:13637521-13638331 REVERSE |
| Match: At1G51060.1 |
score: 122 |
e-value: 1e-28 |
Identity: 62.73% |
Span: 327bp (60.0%) |
Frame: 1 |
| histone H2A, putative | chr1:18930616-18931111 FORWARD |
| Match: At1G54690.1 |
score: 122 |
e-value: 2e-28 |
Identity: 63.81% |
Span: 312bp (57.2%) |
Frame: 1 |
| histone H2A, putative | chr1:20418274-20418873 REVERSE |
| Match: At3G20670.1 |
score: 121 |
e-value: 2e-28 |
Identity: 63.89% |
Span: 321bp (58.9%) |
Frame: 1 |
| histone H2A, putative | chr3:7229478-7229969 FORWARD |
| Match: At5G27670.1 |
score: 118 |
e-value: 2e-27 |
Identity: 61.06% |
Span: 336bp (61.7%) |
Frame: 1 |
| histone H2A, putative | chr5:9792810-9793368 REVERSE |
| Match: At5G59870.1 |
score: 116 |
e-value: 1e-26 |
Identity: 61.47% |
Span: 324bp (59.4%) |
Frame: 1 |
| histone H2A, putative | chr5:24132831-24133370 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q8H7Y8 |
score: 219 |
e-value: 8e-57 |
Identity: 90.84% |
Span: 393bp (72.1%) |
Frame: 1 |
| Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=1 |
| Match: O23628 |
score: 215 |
e-value: 1e-55 |
Identity: 90.6% |
Span: 351bp (64.4%) |
Frame: 1 |
| Histone H2A variant 1 OS=Arabidopsis thaliana GN=H2AV PE=1 SV=1 |
| Match: Q84MP7 |
score: 214 |
e-value: 3e-55 |
Identity: 89.31% |
Span: 393bp (72.1%) |
Frame: 1 |
| Probable histone H2A variant 3 OS=Oryza sativa subsp. japonica GN=Os03g0743400 PE=2 SV=1 |
| Match: Q8S857 |
score: 211 |
e-value: 2e-54 |
Identity: 87.79% |
Span: 393bp (72.1%) |
Frame: 1 |
| Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1 |
| Match: Q9SII0 |
score: 209 |
e-value: 6e-54 |
Identity: 85.5% |
Span: 393bp (72.1%) |
Frame: 1 |
| Probable histone H2A variant 2 OS=Arabidopsis thaliana GN=At2g38810 PE=1 SV=1 |
| Match: Q9C944 |
score: 209 |
e-value: 8e-54 |
Identity: 88.03% |
Span: 351bp (64.4%) |
Frame: 1 |
| Probable histone H2A variant 3 OS=Arabidopsis thaliana GN=At1g52740 PE=1 SV=1 |
| Match: Q5ZMD6 |
score: 193 |
e-value: 6e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3 |
| Match: P08985 |
score: 193 |
e-value: 6e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.v OS=Drosophila melanogaster GN=His2Av PE=1 SV=2 |
| Match: Q6YNC8 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Ovis aries GN=H2AFZ PE=2 SV=3 |
| Match: P0C0S7 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Rattus norvegicus GN=H2afz PE=1 SV=2 |
| Match: Q5RC42 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Pongo abelii GN=H2AFZ PE=2 SV=3 |
| Match: P22647 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Oncorhynchus mykiss GN=h2afz PE=1 SV=4 |
| Match: P0C0S6 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Mus musculus GN=H2afz PE=1 SV=2 |
| Match: P0C0S5 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2 |
| Match: P0C0S4 |
score: 192 |
e-value: 8e-49 |
Identity: 90% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2 |
| Match: P08991 |
score: 192 |
e-value: 1e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus GN=H2A.F/Z PE=1 SV=1 |
| Match: Q5BJ65 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Xenopus tropicalis GN=h2afv PE=2 SV=3 |
| Match: Q6GM74 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Xenopus laevis GN=h2afv PE=2 SV=3 |
| Match: Q6Y237 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Pagrus major GN=h2afv PE=2 SV=3 |
| Match: Q3THW5 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Mus musculus GN=H2afv PE=1 SV=3 |
| Match: Q71UI9 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Homo sapiens GN=H2AFV PE=1 SV=3 |
| Match: Q71PD7 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Danio rerio GN=h2afv PE=2 SV=3 |
| Match: P02272 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Gallus gallus GN=H2AFV PE=1 SV=2 |
| Match: Q32LA7 |
score: 191 |
e-value: 2e-48 |
Identity: 89.09% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Bos taurus GN=H2AFV PE=2 SV=3 |
| Match: O62695 |
score: 190 |
e-value: 5e-48 |
Identity: 88.18% |
Span: 330bp (60.6%) |
Frame: 1 |
| Histone H2A.V OS=Oryctolagus cuniculus GN=H2AFV PE=2 SV=3 |
|
| 219 lower scoring hits censored -- only 25 best hits are stored. |
