| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|77403675|dbj|BAE46416.1| |
score: 305 |
e-value: 7e-81 |
Identity: 62.54% |
Span: 1053bp (84.9%) |
Frame: 3 |
| TATA binding protein associated factor [Solanum tuberosum] |
| Match: gi|270253484|emb|CBI35882.1| |
score: 264 |
e-value: 2e-68 |
Identity: 53.39% |
Span: 1041bp (83.9%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224073716|ref|XP_002304140.1| |
score: 256 |
e-value: 3e-66 |
Identity: 51.73% |
Span: 1050bp (84.6%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222841572|gb|EEE79119.1| predicted protein [Populus trichocarpa] |
| Match: gi|255560645|ref|XP_002521336.1| |
score: 252 |
e-value: 7e-65 |
Identity: 50.93% |
Span: 1050bp (84.6%) |
Frame: 3 |
| protein with unknown function [Ricinus communis] >gi223539414|gb|EEF41004.1| protein with unknown function [Ricinus c... |
| Match: gi|169218920|gb|ACA50283.1| |
score: 221 |
e-value: 1e-55 |
Identity: 48.02% |
Span: 1056bp (85.1%) |
Frame: 3 |
| cytokinin hypersensitive 1 [Arabidopsis thaliana] |
| Match: gi|18394483|ref|NP_564023.1| |
score: 219 |
e-value: 4e-55 |
Identity: 47.64% |
Span: 1056bp (85.1%) |
Frame: 3 |
| EER4 (ENHANCED ETHYLENE RESPONSE 4); DNA binding / transcription initiation factor [Arabidopsis thaliana] >gi30685323... |
| Match: gi|224058669|ref|XP_002299594.1| |
score: 217 |
e-value: 2e-54 |
Identity: 44.96% |
Span: 1047bp (84.4%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222846852|gb|EEE84399.1| predicted protein [Populus trichocarpa] |
| Match: gi|8778478|gb|AAF79486.1|AC022492_30 |
score: 198 |
e-value: 1e-48 |
Identity: 51.12% |
Span: 855bp (68.9%) |
Frame: 3 |
| F1L3.13 [Arabidopsis thaliana] |
| Match: gi|9665128|gb|AAF97312.1|AC007843_15 |
score: 198 |
e-value: 1e-48 |
Identity: 51.12% |
Span: 855bp (68.9%) |
Frame: 3 |
| Unknown protein [Arabidopsis thaliana] |
| Match: gi|225466946|ref|XP_002264851.1| |
score: 191 |
e-value: 1e-46 |
Identity: 55.76% |
Span: 756bp (60.9%) |
Frame: 3 |
| PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Match: gi|224030295|gb|ACN34223.1| |
score: 176 |
e-value: 7e-42 |
Identity: 40.82% |
Span: 1068bp (86.1%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|224031427|gb|ACN34789.1| |
score: 175 |
e-value: 1e-41 |
Identity: 39.24% |
Span: 1068bp (86.1%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|242059221|ref|XP_002458756.1| |
score: 174 |
e-value: 1e-41 |
Identity: 40.11% |
Span: 1068bp (86.1%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g039720 [Sorghum bicolor] >gi241930731|gb|EES03876.1| hypothetical protein SORBIDRA... |
| Match: gi|125528368|gb|EAY76482.1| |
score: 167 |
e-value: 3e-39 |
Identity: 55% |
Span: 654bp (52.7%) |
Frame: 3 |
| hypothetical protein OsI_04423 [Oryza sativa Indica Group] |
| Match: gi|125572625|gb|EAZ14140.1| |
score: 166 |
e-value: 5e-39 |
Identity: 54.75% |
Span: 654bp (52.7%) |
Frame: 3 |
| hypothetical protein OsJ_04067 [Oryza sativa Japonica Group] |
| Match: gi|115441027|ref|NP_001044793.1| |
score: 166 |
e-value: 5e-39 |
Identity: 54.75% |
Span: 654bp (52.7%) |
Frame: 3 |
| Os01g0846900 [Oryza sativa (japonica cultivar-group)] >gi56784033|dbj|BAD82661.1| transcription initiation factor IID... |
| Match: gi|218189414|gb|EEC71841.1| |
score: 129 |
e-value: 5e-28 |
Identity: 36.4% |
Span: 666bp (53.7%) |
Frame: 3 |
| hypothetical protein OsI_04504 [Oryza sativa Indica Group] |
| Match: gi|242059307|ref|XP_002458799.1| |
score: 129 |
e-value: 7e-28 |
Identity: 54.63% |
Span: 321bp (25.9%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g040460 [Sorghum bicolor] >gi241930774|gb|EES03919.1| hypothetical protein SORBIDRA... |
| Match: gi|255575631|ref|XP_002528715.1| |
score: 129 |
e-value: 7e-28 |
Identity: 49.24% |
Span: 393bp (31.7%) |
Frame: 3 |
| protein with unknown function [Ricinus communis] >gi223531809|gb|EEF33627.1| protein with unknown function [Ricinus c... |
| Match: gi|18398741|ref|NP_566367.1| |
score: 129 |
e-value: 7e-28 |
Identity: 37.2% |
Span: 717bp (57.8%) |
Frame: 3 |
| TAF12 (TBP-ASSOCIATED FACTOR 12); DNA binding / transcription initiation factor [Arabidopsis thaliana] >gi6143870|gb|... |
| Match: gi|115441161|ref|NP_001044860.1| |
score: 128 |
e-value: 1e-27 |
Identity: 51.75% |
Span: 339bp (27.3%) |
Frame: 3 |
| Os01g0858500 [Oryza sativa (japonica cultivar-group)] >gi113534391|dbj|BAF06774.1| Os01g0858500 [Oryza sativa Japonic... |
| Match: gi|56784833|dbj|BAD82054.1| |
score: 128 |
e-value: 1e-27 |
Identity: 51.75% |
Span: 339bp (27.3%) |
Frame: 3 |
| transcription initiation factor IID (TFIID) subunit A-like protein [Oryza sativa Japonica Group] |
| Match: gi|270243324|emb|CBI30264.1| |
score: 125 |
e-value: 8e-27 |
Identity: 44.08% |
Span: 453bp (36.5%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225440954|ref|XP_002277150.1| |
score: 125 |
e-value: 8e-27 |
Identity: 44.08% |
Span: 453bp (36.5%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224087397|ref|XP_002308150.1| |
score: 125 |
e-value: 1e-26 |
Identity: 47.45% |
Span: 408bp (32.9%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222854126|gb|EEE91673.1| predicted protein [Populus trichocarpa] |
|
| 119 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At1G17440.2 |
score: 219 |
e-value: 2e-57 |
Identity: 47.64% |
Span: 1056bp (85.1%) |
Frame: 3 |
| transcription initiation factor IID (TFIID) subunit A family protein | chr1:5984400-5987656 REVERSE |
| Match: At1G17440.1 |
score: 219 |
e-value: 2e-57 |
Identity: 47.64% |
Span: 1056bp (85.1%) |
Frame: 3 |
| transcription initiation factor IID (TFIID) subunit A family protein | chr1:5984400-5987656 REVERSE |
| Match: At3G10070.1 |
score: 129 |
e-value: 4e-30 |
Identity: 37.2% |
Span: 717bp (57.8%) |
Frame: 3 |
| Symbols: TAFII58 | TAFII58 (tata-associated factor II 58) | chr3:3104200-3106803 REVERSE |
|
| swissprot [blastx] | Showing best 8 hits recorded |
| Match: O13722 |
score: 115 |
e-value: 5e-25 |
Identity: 60.49% |
Span: 243bp (19.6%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Schizosaccharomyces pombe GN=taf12 PE=1 SV=1 |
| Match: Q8VE65 |
score: 114 |
e-value: 2e-24 |
Identity: 52.94% |
Span: 303bp (24.4%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Mus musculus GN=Taf12 PE=1 SV=1 |
| Match: Q16514 |
score: 114 |
e-value: 2e-24 |
Identity: 52.94% |
Span: 303bp (24.4%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Homo sapiens GN=TAF12 PE=1 SV=1 |
| Match: Q3T174 |
score: 114 |
e-value: 2e-24 |
Identity: 52.94% |
Span: 303bp (24.4%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Bos taurus GN=TAF12 PE=2 SV=1 |
| Match: Q91858 |
score: 110 |
e-value: 3e-23 |
Identity: 50% |
Span: 303bp (24.4%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Xenopus laevis GN=taf12 PE=2 SV=1 |
| Match: Q555L9 |
score: 97.8 |
e-value: 1e-19 |
Identity: 48.39% |
Span: 261bp (21.0%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Dictyostelium discoideum GN=TAF12 PE=3 SV=2 |
| Match: Q03761 |
score: 93.6 |
e-value: 3e-18 |
Identity: 47.13% |
Span: 246bp (19.8%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Saccharomyces cerevisiae GN=TAF12 PE=1 SV=1 |
| Match: P49905 |
score: 73.9 |
e-value: 2e-12 |
Identity: 35.71% |
Span: 291bp (23.4%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 12 OS=Drosophila melanogaster GN=Taf12 PE=1 SV=1 |
|
