All Stored BLAST annotations for SGN-U275518
genbank/nr [blastx] Showing best 25 hits recorded
Match: gi|62751087|dbj|BAD95791.1| score: 78.2 e-value: 3e-13 Identity: 73.47% Span: 141bp (27.6%) Frame: 3
similar to u1 small nuclear ribonucleoprotein C [Solanum lycopersicum]
Match: gi|270244896|emb|CBI32274.1| score: 78.2 e-value: 3e-13 Identity: 85.37% Span: 117bp (22.9%) Frame: 3
unnamed protein product [Vitis vinifera]
Match: gi|255559356|ref|XP_002520698.1| score: 78.2 e-value: 3e-13 Identity: 85.37% Span: 117bp (22.9%) Frame: 3
U1 small nuclear ribonucleoprotein C, putative [Ricinus communis] >gi223540083|gb|EEF41660.1| U1 small nuclear ribonu...
Match: gi|225436815|ref|XP_002270246.1| score: 78.2 e-value: 3e-13 Identity: 85.37% Span: 117bp (22.9%) Frame: 3
PREDICTED: similar to putative C-type U1 snRNP [Vitis vinifera]
Match: gi|125538898|gb|EAY85293.1| score: 77 e-value: 7e-13 Identity: 82.93% Span: 117bp (22.9%) Frame: 3
hypothetical protein OsI_06664 [Oryza sativa Indica Group]
Match: gi|223942415|gb|ACN25291.1| score: 77 e-value: 7e-13 Identity: 82.93% Span: 117bp (22.9%) Frame: 3
unknown [Zea mays]
Match: gi|226462084|gb|EEH59376.1| score: 77 e-value: 7e-13 Identity: 75% Span: 126bp (24.7%) Frame: 3
U1 small nuclear ribonucleoprotein C protein [Micromonas pusilla CCMP1545]
Match: gi|212722338|ref|NP_001131283.1| score: 77 e-value: 7e-13 Identity: 82.93% Span: 117bp (22.9%) Frame: 3
hypothetical protein LOC100192596 [Zea mays] >gi194691078|gb|ACF79623.1| unknown [Zea mays] >gi|195658989|gb|ACG48962...
Match: gi|242064726|ref|XP_002453652.1| score: 77 e-value: 7e-13 Identity: 82.93% Span: 117bp (22.9%) Frame: 3
hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor] >gi241933483|gb|EES06628.1| hypothetical protein SORBIDRA...
Match: gi|115445447|ref|NP_001046503.1| score: 77 e-value: 7e-13 Identity: 82.93% Span: 117bp (22.9%) Frame: 3
Os02g0266100 [Oryza sativa (japonica cultivar-group)] >gi50251962|dbj|BAD27897.1| putative u1 small nuclear ribonucle...
Match: gi|242062554|ref|XP_002452566.1| score: 77 e-value: 7e-13 Identity: 82.93% Span: 117bp (22.9%) Frame: 3
hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor] >gi241932397|gb|EES05542.1| hypothetical protein SORBIDRA...
Match: gi|224073782|ref|XP_002304170.1| score: 76.3 e-value: 9e-27 Identity: 100% Span: 93bp (18.2%) Frame: 3
predicted protein [Populus trichocarpa] >gi222841602|gb|EEE79149.1| predicted protein [Populus trichocarpa]
Match: gi|18412147|ref|NP_567250.1| score: 76.3 e-value: 7e-26 Identity: 100% Span: 93bp (18.2%) Frame: 3
proline-rich family protein [Arabidopsis thaliana] >gi62320807|dbj|BAD93742.1| putative C-type U1 snRNP [Arabidopsis ...
Match: gi|4262140|gb|AAD14440.1| score: 76.3 e-value: 8e-26 Identity: 100% Span: 93bp (18.2%) Frame: 3
putative C-type U1 snRNP [Arabidopsis thaliana] >gi7270182|emb|CAB77797.1| putative C-type U1 snRNP [Arabidopsis thal...
Match: gi|28466929|gb|AAO44073.1| score: 76.3 e-value: 3e-25 Identity: 100% Span: 93bp (18.2%) Frame: 3
At4g03120 [Arabidopsis thaliana] >gi110743941|dbj|BAE99804.1| putative C-type U1 snRNP [Arabidopsis thaliana]
Match: gi|270244896|emb|CBI32274.1| score: 75.9 e-value: 2e-12 Identity: 66.67% Span: 162bp (31.8%) Frame: 2
unnamed protein product [Vitis vinifera]
Match: gi|225436815|ref|XP_002270246.1| score: 75.9 e-value: 2e-12 Identity: 66.67% Span: 162bp (31.8%) Frame: 2
PREDICTED: similar to putative C-type U1 snRNP [Vitis vinifera]
Match: gi|255559356|ref|XP_002520698.1| score: 74.7 e-value: 4e-12 Identity: 70.59% Span: 153bp (30.0%) Frame: 2
U1 small nuclear ribonucleoprotein C, putative [Ricinus communis] >gi223540083|gb|EEF41660.1| U1 small nuclear ribonu...
Match: gi|168040659|ref|XP_001772811.1| score: 71.2 e-value: 4e-11 Identity: 78.05% Span: 117bp (22.9%) Frame: 3
predicted protein [Physcomitrella patens subsp. patens] >gi162675888|gb|EDQ62378.1| predicted protein [Physcomitrella...
Match: gi|159474196|ref|XP_001695215.1| score: 70.9 e-value: 5e-11 Identity: 71.43% Span: 120bp (23.5%) Frame: 3
predicted protein [Chlamydomonas reinhardtii] >gi158276149|gb|EDP01923.1| predicted protein [Chlamydomonas reinhardtii]
Match: gi|224073782|ref|XP_002304170.1| score: 70.1 e-value: 9e-27 Identity: 64.71% Span: 153bp (30.0%) Frame: 2
predicted protein [Populus trichocarpa] >gi222841602|gb|EEE79149.1| predicted protein [Populus trichocarpa]
Match: gi|18412147|ref|NP_567250.1| score: 67 e-value: 7e-26 Identity: 60.38% Span: 159bp (31.2%) Frame: 2
proline-rich family protein [Arabidopsis thaliana] >gi62320807|dbj|BAD93742.1| putative C-type U1 snRNP [Arabidopsis ...
Match: gi|4262140|gb|AAD14440.1| score: 67 e-value: 8e-26 Identity: 60.38% Span: 159bp (31.2%) Frame: 2
putative C-type U1 snRNP [Arabidopsis thaliana] >gi7270182|emb|CAB77797.1| putative C-type U1 snRNP [Arabidopsis thal...
Match: gi|17539712|ref|NP_501490.1| score: 66.2 e-value: 9e-11 Identity: 83.87% Span: 93bp (18.2%) Frame: 3
hypothetical protein F08B4.7 [Caenorhabditis elegans] >gi1705482|gb|AAB37732.1| Hypothetical protein F08B4.7 [Caenorh...
Match: gi|28466929|gb|AAO44073.1| score: 65.1 e-value: 3e-25 Identity: 58.49% Span: 159bp (31.2%) Frame: 2
At4g03120 [Arabidopsis thaliana] >gi110743941|dbj|BAE99804.1| putative C-type U1 snRNP [Arabidopsis thaliana]

3 lower scoring hits censored -- only 25 best hits are stored.
arabidopsis/peptide [blastx] Showing best 2 hits recorded
Match: At4G03120.1 score: 76.3 e-value: 4e-28 Identity: 100% Span: 93bp (18.2%) Frame: 3
proline-rich family protein | chr4:1385747-1387331 FORWARD
Match: At4G03120.1 score: 67 e-value: 4e-28 Identity: 60.38% Span: 159bp (31.2%) Frame: 2
proline-rich family protein | chr4:1385747-1387331 FORWARD

swissprot [blastx] Showing best 8 hits recorded
Match: Q03369 score: 63.2 e-value: 3e-11 Identity: 80.65% Span: 93bp (18.2%) Frame: 3
U1 small nuclear ribonucleoprotein C OS=Xenopus laevis GN=snrp1c PE=2 SV=1
Match: Q62241 score: 63.2 e-value: 3e-11 Identity: 80.65% Span: 93bp (18.2%) Frame: 3
U1 small nuclear ribonucleoprotein C OS=Mus musculus GN=Snrpc PE=2 SV=1
Match: P09234 score: 63.2 e-value: 3e-11 Identity: 80.65% Span: 93bp (18.2%) Frame: 3
U1 small nuclear ribonucleoprotein C OS=Homo sapiens GN=SNRPC PE=1 SV=1
Match: Q32PA0 score: 61.6 e-value: 7e-11 Identity: 80.65% Span: 93bp (18.2%) Frame: 3
U1 small nuclear ribonucleoprotein C OS=Bos taurus GN=SNRPC PE=2 SV=1
Match: Q62241 score: 26.9 e-value: 3e-11 Identity: 60% Span: 60bp (11.8%) Frame: 2
U1 small nuclear ribonucleoprotein C OS=Mus musculus GN=Snrpc PE=2 SV=1
Match: Q32PA0 score: 26.9 e-value: 7e-11 Identity: 60% Span: 60bp (11.8%) Frame: 2
U1 small nuclear ribonucleoprotein C OS=Bos taurus GN=SNRPC PE=2 SV=1
Match: P09234 score: 26.9 e-value: 3e-11 Identity: 60% Span: 60bp (11.8%) Frame: 2
U1 small nuclear ribonucleoprotein C OS=Homo sapiens GN=SNRPC PE=1 SV=1
Match: Q03369 score: 26.9 e-value: 3e-11 Identity: 60% Span: 60bp (11.8%) Frame: 2
U1 small nuclear ribonucleoprotein C OS=Xenopus laevis GN=snrp1c PE=2 SV=1