| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270235256|emb|CBI24386.1| |
score: 410 |
e-value: 0 |
Identity: 66.45% |
Span: 936bp (44.1%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225436059|ref|XP_002272083.1| |
score: 410 |
e-value: 2e-120 |
Identity: 66.45% |
Span: 936bp (44.1%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|62321108|dbj|BAD94211.1| |
score: 362 |
e-value: 1e-104 |
Identity: 61.61% |
Span: 930bp (43.8%) |
Frame: 3 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|255557168|ref|XP_002519615.1| |
score: 362 |
e-value: 1e-177 |
Identity: 67.52% |
Span: 822bp (38.8%) |
Frame: 3 |
| lupus la ribonucleoprotein, putative [Ricinus communis] >gi223541205|gb|EEF42760.1| lupus la ribonucleoprotein, putat... |
| Match: gi|18420415|ref|NP_568409.1| |
score: 362 |
e-value: 3e-158 |
Identity: 61.61% |
Span: 930bp (43.8%) |
Frame: 3 |
| La domain-containing protein / proline-rich family protein [Arabidopsis thaliana] >gi15450527|gb|AAK96556.1| AT5g2116... |
| Match: gi|270244238|emb|CBI31174.1| |
score: 309 |
e-value: 2e-116 |
Identity: 52.24% |
Span: 930bp (43.8%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225439123|ref|XP_002266709.1| |
score: 309 |
e-value: 2e-139 |
Identity: 52.24% |
Span: 930bp (43.8%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|222618160|gb|EEE54292.1| |
score: 303 |
e-value: 7e-80 |
Identity: 52.53% |
Span: 930bp (43.8%) |
Frame: 3 |
| hypothetical protein OsJ_01217 [Oryza sativa Japonica Group] |
| Match: gi|115435832|ref|NP_001042674.1| |
score: 303 |
e-value: 7e-80 |
Identity: 52.53% |
Span: 930bp (43.8%) |
Frame: 3 |
| Os01g0266000 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|218187940|gb|EEC70367.1| |
score: 303 |
e-value: 7e-80 |
Identity: 52.53% |
Span: 930bp (43.8%) |
Frame: 3 |
| hypothetical protein OsI_01301 [Oryza sativa Indica Group] |
| Match: gi|147807771|emb|CAN62251.1| |
score: 297 |
e-value: 6e-83 |
Identity: 58.76% |
Span: 819bp (38.6%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|255557168|ref|XP_002519615.1| |
score: 286 |
e-value: 1e-177 |
Identity: 43.48% |
Span: 1173bp (55.3%) |
Frame: 2 |
| lupus la ribonucleoprotein, putative [Ricinus communis] >gi223541205|gb|EEF42760.1| lupus la ribonucleoprotein, putat... |
| Match: gi|270235256|emb|CBI24386.1| |
score: 283 |
e-value: 0 |
Identity: 43.83% |
Span: 1173bp (55.3%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225436059|ref|XP_002272083.1| |
score: 271 |
e-value: 3e-70 |
Identity: 44.76% |
Span: 993bp (46.8%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|242052541|ref|XP_002455416.1| |
score: 269 |
e-value: 2e-117 |
Identity: 50.48% |
Span: 933bp (44.0%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g010440 [Sorghum bicolor] >gi241927391|gb|EES00536.1| hypothetical protein SORBIDRA... |
| Match: gi|18420415|ref|NP_568409.1| |
score: 221 |
e-value: 3e-158 |
Identity: 39.44% |
Span: 1164bp (54.9%) |
Frame: 2 |
| La domain-containing protein / proline-rich family protein [Arabidopsis thaliana] >gi15450527|gb|AAK96556.1| AT5g2116... |
| Match: gi|225439123|ref|XP_002266709.1| |
score: 211 |
e-value: 2e-139 |
Identity: 35.18% |
Span: 1182bp (55.7%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|242052541|ref|XP_002455416.1| |
score: 179 |
e-value: 2e-117 |
Identity: 32.37% |
Span: 1137bp (53.6%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_03g010440 [Sorghum bicolor] >gi241927391|gb|EES00536.1| hypothetical protein SORBIDRA... |
| Match: gi|115435832|ref|NP_001042674.1| |
score: 176 |
e-value: 1e-41 |
Identity: 31.5% |
Span: 1089bp (51.3%) |
Frame: 2 |
| Os01g0266000 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|222618160|gb|EEE54292.1| |
score: 176 |
e-value: 1e-41 |
Identity: 31.5% |
Span: 1089bp (51.3%) |
Frame: 2 |
| hypothetical protein OsJ_01217 [Oryza sativa Japonica Group] |
| Match: gi|218187940|gb|EEC70367.1| |
score: 173 |
e-value: 7e-41 |
Identity: 31.26% |
Span: 1089bp (51.3%) |
Frame: 2 |
| hypothetical protein OsI_01301 [Oryza sativa Indica Group] |
| Match: gi|270244238|emb|CBI31174.1| |
score: 135 |
e-value: 2e-116 |
Identity: 33.02% |
Span: 738bp (34.8%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225436059|ref|XP_002272083.1| |
score: 47.4 |
e-value: 2e-120 |
Identity: 49.09% |
Span: 165bp (7.8%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|62321108|dbj|BAD94211.1| |
score: 43.5 |
e-value: 1e-104 |
Identity: 54.76% |
Span: 126bp (5.9%) |
Frame: 2 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|147807771|emb|CAN62251.1| |
score: 36.2 |
e-value: 6e-83 |
Identity: 51.85% |
Span: 81bp (3.8%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
|
| 234 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 7 hits recorded |
| Match: At5G21160.1 |
score: 362 |
e-value: 2e-160 |
Identity: 61.61% |
Span: 930bp (43.8%) |
Frame: 3 |
| La domain-containing protein / proline-rich family protein | chr5:7199194-7203882 REVERSE |
| Match: At5G21160.1 |
score: 221 |
e-value: 2e-160 |
Identity: 39.44% |
Span: 1164bp (54.9%) |
Frame: 2 |
| La domain-containing protein / proline-rich family protein | chr5:7199194-7203882 REVERSE |
| Match: At4G35890.1 |
score: 99 |
e-value: 1e-20 |
Identity: 31.78% |
Span: 744bp (35.1%) |
Frame: 2 |
| La domain-containing protein | chr4:16997436-17000413 FORWARD |
| Match: At5G66100.1 |
score: 93.2 |
e-value: 6e-19 |
Identity: 36.13% |
Span: 351bp (16.5%) |
Frame: 2 |
| La domain-containing protein | chr5:26444865-26446998 FORWARD |
| Match: At5G46250.3 |
score: 69.3 |
e-value: 9e-12 |
Identity: 45.45% |
Span: 225bp (10.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:18772615-18774950 FORWARD |
| Match: At5G46250.2 |
score: 69.3 |
e-value: 9e-12 |
Identity: 45.45% |
Span: 225bp (10.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:18772615-18774950 FORWARD |
| Match: At5G46250.1 |
score: 69.3 |
e-value: 9e-12 |
Identity: 45.45% |
Span: 225bp (10.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr5:18772615-18775283 FORWARD |
|
| swissprot [blastx] | Showing best 10 hits recorded |
| Match: Q659C4 |
score: 200 |
e-value: 4e-50 |
Identity: 55.36% |
Span: 504bp (23.8%) |
Frame: 3 |
| La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2 |
| Match: Q9VAW5 |
score: 197 |
e-value: 3e-49 |
Identity: 55.69% |
Span: 501bp (23.6%) |
Frame: 3 |
| La-related protein OS=Drosophila melanogaster GN=larp PE=1 SV=4 |
| Match: Q6PKG0 |
score: 193 |
e-value: 4e-48 |
Identity: 53.57% |
Span: 504bp (23.8%) |
Frame: 3 |
| La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 |
| Match: Q6ZQ58 |
score: 193 |
e-value: 4e-48 |
Identity: 53.57% |
Span: 504bp (23.8%) |
Frame: 3 |
| La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2 |
| Match: Q659C4 |
score: 89.4 |
e-value: 1e-16 |
Identity: 26.35% |
Span: 825bp (38.9%) |
Frame: 2 |
| La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2 |
| Match: Q6PKG0 |
score: 85.1 |
e-value: 2e-15 |
Identity: 28.43% |
Span: 792bp (37.3%) |
Frame: 2 |
| La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2 |
| Match: Q6ZQ58 |
score: 80.5 |
e-value: 4e-14 |
Identity: 48.15% |
Span: 243bp (11.5%) |
Frame: 2 |
| La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2 |
| Match: Q9P6K0 |
score: 73.2 |
e-value: 7e-12 |
Identity: 39.77% |
Span: 243bp (11.5%) |
Frame: 2 |
| Uncharacterized HTH La-type RNA-binding protein C1527.03 OS=Schizosaccharomyces pombe GN=SPAC1527.03 PE=1 SV=1 |
| Match: Q9VAW5 |
score: 72.8 |
e-value: 9e-12 |
Identity: 40% |
Span: 252bp (11.9%) |
Frame: 2 |
| La-related protein OS=Drosophila melanogaster GN=larp PE=1 SV=4 |
| Match: Q9I7T7 |
score: 70.1 |
e-value: 6e-11 |
Identity: 43.02% |
Span: 258bp (12.2%) |
Frame: 2 |
| La-related protein CG11505 OS=Drosophila melanogaster GN=CG11505 PE=1 SV=2 |
|
